RNA–Protein interactions for RNA: ENST00000601038.5

SCAF1-204, Transcript of SR-related CTD associated factor 1, humanhuman

APPRIS ALT2 TSL 3

Gene SCAF1, Length 491 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF1-204ENST00000601038 TOR1BO14657 336 aa17.2■□□□□ 0.34
SCAF1-204ENST00000601038 TM7SF2O76062 418 aa17.2■□□□□ 0.34
SCAF1-204ENST00000601038 TIMP2P16035 220 aa17.2■□□□□ 0.34
SCAF1-204ENST00000601038 THOP1P52888 689 aa17.2■□□□□ 0.34
SCAF1-204ENST00000601038 YPEL5P62699 121 aa17.2■□□□□ 0.34
SCAF1-204ENST00000601038 TBC1D25Q3MII6 688 aa17.2■□□□□ 0.34
SCAF1-204ENST00000601038 ACAD10Q6JQN1 1059 aa17.2■□□□□ 0.34
SCAF1-204ENST00000601038 APTXQ7Z2E3 356 aaKnown RBP17.2■□□□□ 0.34
SCAF1-204ENST00000601038 MCOLN2Q8IZK6 566 aa17.2■□□□□ 0.34
SCAF1-204ENST00000601038 NETO2Q8NC67 525 aa17.2■□□□□ 0.34
SCAF1-204ENST00000601038 IFI44Q8TCB0 444 aa17.2■□□□□ 0.34
SCAF1-204ENST00000601038 HCAR2Q8TDS4 363 aa17.2■□□□□ 0.34
SCAF1-204ENST00000601038 CXorf40AQ8TE69 158 aa17.2■□□□□ 0.34
SCAF1-204ENST00000601038 GBP4Q96PP9 640 aa17.2■□□□□ 0.34
SCAF1-204ENST00000601038 IL12RB2Q99665 862 aa17.2■□□□□ 0.34
SCAF1-204ENST00000601038 C1QTNF7Q9BXJ2 289 aa17.2■□□□□ 0.34
SCAF1-204ENST00000601038 HSD3B7Q9H2F3 369 aa17.2■□□□□ 0.34
SCAF1-204ENST00000601038 DONSONQ9NYP3 566 aa17.2■□□□□ 0.34
SCAF1-204ENST00000601038 SPASTQ9UBP0 616 aa17.2■□□□□ 0.34
SCAF1-204ENST00000601038 PCDHB1Q9Y5F3 818 aa17.2■□□□□ 0.34
SCAF1-204ENST00000601038 FGF10O15520 208 aaPredicted RBP17.19■□□□□ 0.34
SCAF1-204ENST00000601038 MMP20O60882 483 aa17.19■□□□□ 0.34
SCAF1-204ENST00000601038 FERP16591 822 aa17.19■□□□□ 0.34
SCAF1-204ENST00000601038 DESP17661 470 aa17.19■□□□□ 0.34
SCAF1-204ENST00000601038 HTR7P34969 479 aa17.19■□□□□ 0.34
SCAF1-204ENST00000601038 IGFALSP35858 605 aa17.19■□□□□ 0.34
SCAF1-204ENST00000601038 ANP32AP39687 249 aaKnown RBP17.19■□□□□ 0.34
SCAF1-204ENST00000601038 SUOXP51687 545 aa17.19■□□□□ 0.34
SCAF1-204ENST00000601038 GRM3Q14832 879 aa17.19■□□□□ 0.34
SCAF1-204ENST00000601038 NCAPHQ15003 741 aa17.19■□□□□ 0.34
SCAF1-204ENST00000601038 CYTH1Q15438 398 aa17.19■□□□□ 0.34
SCAF1-204ENST00000601038 DEFB133Q30KQ1 61 aa17.19■□□□□ 0.34
SCAF1-204ENST00000601038 LRRC73Q5JTD7 316 aa17.19■□□□□ 0.34
SCAF1-204ENST00000601038 DCUN1D2Q6PH85 259 aa17.19■□□□□ 0.34
SCAF1-204ENST00000601038 VPS36Q86VN1 386 aa17.19■□□□□ 0.34
SCAF1-204ENST00000601038 LSMEM2Q8N112 164 aa17.19■□□□□ 0.34
SCAF1-204ENST00000601038 MAPK15Q8TD08 544 aa17.19■□□□□ 0.34
SCAF1-204ENST00000601038 LMX1AQ8TE12 382 aa17.19■□□□□ 0.34
SCAF1-204ENST00000601038 VCPIP1Q96JH7 1222 aa17.19■□□□□ 0.34
SCAF1-204ENST00000601038 TBATAQ96M53 351 aa17.19■□□□□ 0.34
SCAF1-204ENST00000601038 PRORYQ9H606 182 aa17.19■□□□□ 0.34
SCAF1-204ENST00000601038 EME2A4GXA9 379 aaPredicted RBP17.18■□□□□ 0.34
SCAF1-204ENST00000601038 LZTS3O60299 673 aaPredicted RBP17.18■□□□□ 0.34
SCAF1-204ENST00000601038 CSO75390 466 aaKnown RBP17.18■□□□□ 0.34
SCAF1-204ENST00000601038 ITIH2P19823 946 aa17.18■□□□□ 0.34
SCAF1-204ENST00000601038 OGDHQ02218 1023 aa17.18■□□□□ 0.34
SCAF1-204ENST00000601038 CDKN3Q16667 212 aa17.18■□□□□ 0.34
SCAF1-204ENST00000601038 TMEM52BQ4KMG9 183 aa17.18■□□□□ 0.34
SCAF1-204ENST00000601038 PPP1R2P3Q6NXS1 205 aa17.18■□□□□ 0.34
SCAF1-204ENST00000601038 IRF2BP2Q7Z5L9 587 aa17.18■□□□□ 0.34
SCAF1-204ENST00000601038 DNAAF5Q86Y56 855 aa17.18■□□□□ 0.34
SCAF1-204ENST00000601038 TP53I13Q8NBR0 393 aaPredicted RBP17.18■□□□□ 0.34
SCAF1-204ENST00000601038 ZNF578Q96N58 590 aaPredicted RBP17.18■□□□□ 0.34
SCAF1-204ENST00000601038 UBL7Q96S82 380 aaPredicted RBP17.18■□□□□ 0.34
SCAF1-204ENST00000601038 LRRC19Q9H756 370 aa17.18■□□□□ 0.34
SCAF1-204ENST00000601038 MBNL1Q9NR56 388 aaKnown RBP17.18■□□□□ 0.34
SCAF1-204ENST00000601038 LHX3Q9UBR4 397 aa17.18■□□□□ 0.34
SCAF1-204ENST00000601038 UBA2Q9UBT2 640 aaPredicted RBP17.18■□□□□ 0.34
SCAF1-204ENST00000601038 APOBEC3BQ9UH17 382 aaKnown RBP17.18■□□□□ 0.34
SCAF1-204ENST00000601038 RAI2Q9Y5P3 530 aa17.18■□□□□ 0.34
SCAF1-204ENST00000601038 NBEAQ8NFP9 2946 aa17.17■□□□□ 0.34
SCAF1-204ENST00000601038 FASNP49327 2511 aaKnown RBP17.17■□□□□ 0.34
SCAF1-204ENST00000601038 CPED1A4D0V7 1026 aa17.17■□□□□ 0.34
SCAF1-204ENST00000601038 EIF4E1BA6NMX2 242 aaKnown RBP17.17■□□□□ 0.34
SCAF1-204ENST00000601038 INSIG1O15503 277 aa17.17■□□□□ 0.34
SCAF1-204ENST00000601038 USP12O75317 370 aa17.17■□□□□ 0.34
SCAF1-204ENST00000601038 GCATO75600 419 aa17.17■□□□□ 0.34
SCAF1-204ENST00000601038 DXOO77932 396 aaKnown RBP17.17■□□□□ 0.34
SCAF1-204ENST00000601038 MPOP05164 745 aa17.17■□□□□ 0.34
SCAF1-204ENST00000601038 TNFAIP3P21580 790 aa17.17■□□□□ 0.34
SCAF1-204ENST00000601038 XPAP23025 273 aaPredicted RBP17.17■□□□□ 0.34
SCAF1-204ENST00000601038 EIF4A3P38919 411 aaKnown RBP17.17■□□□□ 0.34
SCAF1-204ENST00000601038 LSSP48449 732 aa17.17■□□□□ 0.34
SCAF1-204ENST00000601038 NDST2P52849 883 aa17.17■□□□□ 0.34
SCAF1-204ENST00000601038 TPI1P60174 286 aa17.17■□□□□ 0.34
SCAF1-204ENST00000601038 ELP6Q0PNE2 266 aa17.17■□□□□ 0.34
SCAF1-204ENST00000601038 MAMLD1Q13495 774 aa17.17■□□□□ 0.34
SCAF1-204ENST00000601038 NR0B2Q15466 257 aa17.17■□□□□ 0.34
SCAF1-204ENST00000601038 UGP2Q16851 508 aa17.17■□□□□ 0.34
SCAF1-204ENST00000601038 KLHL40Q2TBA0 621 aa17.17■□□□□ 0.34
SCAF1-204ENST00000601038 PRRT3Q5FWE3 981 aa17.17■□□□□ 0.34
SCAF1-204ENST00000601038 GUSBP11Q6P575 273 aa17.17■□□□□ 0.34
SCAF1-204ENST00000601038 MACC1Q6ZN28 852 aa17.17■□□□□ 0.34
SCAF1-204ENST00000601038 PHACTR4Q8IZ21 702 aa17.17■□□□□ 0.34
SCAF1-204ENST00000601038 RBFAQ8N0V3 343 aa17.17■□□□□ 0.34
SCAF1-204ENST00000601038 TPCN2Q8NHX9 752 aa17.17■□□□□ 0.34
SCAF1-204ENST00000601038 GRAMD1AQ96CP6 724 aa17.17■□□□□ 0.34
SCAF1-204ENST00000601038 ZNF641Q96N77 438 aaPredicted RBP17.17■□□□□ 0.34
SCAF1-204ENST00000601038 NCAPGQ9BPX3 1015 aa17.17■□□□□ 0.34
SCAF1-204ENST00000601038 SYT11Q9BT88 431 aa17.17■□□□□ 0.34
SCAF1-204ENST00000601038 WRAP53Q9BUR4 548 aaKnown RBP17.17■□□□□ 0.34
SCAF1-204ENST00000601038 BOCQ9BWV1 1114 aa17.17■□□□□ 0.34
SCAF1-204ENST00000601038 SLC13A1Q9BZW2 595 aa17.17■□□□□ 0.34
SCAF1-204ENST00000601038 TCEAL2Q9H3H9 227 aaPredicted RBP17.17■□□□□ 0.34
SCAF1-204ENST00000601038 SUV39H2Q9H5I1 410 aa17.17■□□□□ 0.34
SCAF1-204ENST00000601038 POLR1BQ9H9Y6 1135 aa17.17■□□□□ 0.34
SCAF1-204ENST00000601038 PDFQ9HBH1 243 aa17.17■□□□□ 0.34
SCAF1-204ENST00000601038 TAS2R14Q9NYV8 317 aa17.17■□□□□ 0.34
SCAF1-204ENST00000601038 BAHCC1Q9P281 2608 aa17.17■□□□□ 0.34
SCAF1-204ENST00000601038 PNMA8BQ9ULN7 279 aaPredicted RBP17.17■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 34.2 ms