RNA–Protein interactions for RNA: ENST00000600380.1

FARP1-230, Transcript of FERM, ARH/RhoGEF and pleckstrin domain protein 1, humanhuman

TSL 3

Gene FARP1, Length 510 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FARP1-230ENST00000600380 HDAC8Q9BY41 377 aa11.96□□□□□ -0.49
FARP1-230ENST00000600380 SUV39H2Q9H5I1 410 aa11.96□□□□□ -0.49
FARP1-230ENST00000600380 C6orf106Q9H6K1 298 aaPredicted RBP11.96□□□□□ -0.49
FARP1-230ENST00000600380 SCUBE2Q9NQ36 999 aa11.96□□□□□ -0.49
FARP1-230ENST00000600380 GGT7Q9UJ14 662 aa11.96□□□□□ -0.49
FARP1-230ENST00000600380 ITM2BQ9Y287 266 aa11.96□□□□□ -0.49
FARP1-230ENST00000600380 FARP1Q9Y4F1 1045 aaPredicted RBP11.96□□□□□ -0.49
FARP1-230ENST00000600380 TTLL3Q9Y4R7 772 aa11.96□□□□□ -0.49
FARP1-230ENST00000600380 PCDHGA2Q9Y5H1 932 aa11.96□□□□□ -0.49
FARP1-230ENST00000600380 SLCO1B1Q9Y6L6 691 aa11.96□□□□□ -0.49
FARP1-230ENST00000600380 DOCK9Q9BZ29 2069 aa11.96□□□□□ -0.5
FARP1-230ENST00000600380 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa11.95□□□□□ -0.5
FARP1-230ENST00000600380 A0A0U1RQS6 177 aa11.95□□□□□ -0.5
FARP1-230ENST00000600380 TSPAN11A1L157 253 aa11.95□□□□□ -0.5
FARP1-230ENST00000600380 C1QTNF3-AMACRE9PGA6 284 aa11.95□□□□□ -0.5
FARP1-230ENST00000600380 HTRA2O43464 458 aaPredicted RBP11.95□□□□□ -0.5
FARP1-230ENST00000600380 MT-CYBP00156 380 aaPredicted RBP11.95□□□□□ -0.5
FARP1-230ENST00000600380 ZSCAN5DPP0CG00 497 aa11.95□□□□□ -0.5
FARP1-230ENST00000600380 ACADMP11310 421 aa11.95□□□□□ -0.5
FARP1-230ENST00000600380 NFKB1P19838 968 aa11.95□□□□□ -0.5
FARP1-230ENST00000600380 ITGB7P26010 798 aa11.95□□□□□ -0.5
FARP1-230ENST00000600380 CD6P30203 668 aa11.95□□□□□ -0.5
FARP1-230ENST00000600380 HSPA9P38646 679 aaKnown RBP11.95□□□□□ -0.5
FARP1-230ENST00000600380 CD86P42081 329 aa11.95□□□□□ -0.5
FARP1-230ENST00000600380 PTPN5P54829 565 aa11.95□□□□□ -0.5
FARP1-230ENST00000600380 ADPRHP54922 357 aa11.95□□□□□ -0.5
FARP1-230ENST00000600380 AP1S1P61966 158 aa11.95□□□□□ -0.5
FARP1-230ENST00000600380 PLK5Q496M5 336 aa11.95□□□□□ -0.5
FARP1-230ENST00000600380 FAM46CQ5VWP2 391 aa11.95□□□□□ -0.5
FARP1-230ENST00000600380 USP30Q70CQ3 517 aa11.95□□□□□ -0.5
FARP1-230ENST00000600380 ERN2Q76MJ5 926 aaKnown RBP11.95□□□□□ -0.5
FARP1-230ENST00000600380 SLC41A1Q8IVJ1 513 aa11.95□□□□□ -0.5
FARP1-230ENST00000600380 TMEFF1Q8IYR6 380 aa11.95□□□□□ -0.5
FARP1-230ENST00000600380 ACTRT1Q8TDG2 376 aa11.95□□□□□ -0.5
FARP1-230ENST00000600380 ATOH1Q92858 354 aaPredicted RBP11.95□□□□□ -0.5
FARP1-230ENST00000600380 ECHDC3Q96DC8 303 aa11.95□□□□□ -0.5
FARP1-230ENST00000600380 TRIM44Q96DX7 344 aaPredicted RBP11.95□□□□□ -0.5
FARP1-230ENST00000600380 CAPZA3Q96KX2 299 aa11.95□□□□□ -0.5
FARP1-230ENST00000600380 RBM15Q96T37 977 aaKnown RBP eCLIP11.95□□□□□ -0.5
FARP1-230ENST00000600380 OMDQ99983 421 aa11.95□□□□□ -0.5
FARP1-230ENST00000600380 GPR174Q9BXC1 333 aa11.95□□□□□ -0.5
FARP1-230ENST00000600380 POLR1EQ9GZS1 481 aaKnown RBP11.95□□□□□ -0.5
FARP1-230ENST00000600380 DUSP15Q9H1R2 295 aaPredicted RBP11.95□□□□□ -0.5
FARP1-230ENST00000600380 UBP1Q9NZI7 540 aa11.95□□□□□ -0.5
FARP1-230ENST00000600380 AMACRQ9UHK6 382 aa11.95□□□□□ -0.5
FARP1-230ENST00000600380 RAI2Q9Y5P3 530 aa11.95□□□□□ -0.5
FARP1-230ENST00000600380 PTPRZ1P23471 2315 aaPredicted RBP11.95□□□□□ -0.5
FARP1-230ENST00000600380 PLXND1Q9Y4D7 1925 aa11.95□□□□□ -0.5
FARP1-230ENST00000600380 FAM186AA6NE01 2351 aa11.94□□□□□ -0.5
FARP1-230ENST00000600380 C5orf60A6NFR6 353 aa11.94□□□□□ -0.5
FARP1-230ENST00000600380 CES2O00748 559 aa11.94□□□□□ -0.5
FARP1-230ENST00000600380 AREL1O15033 823 aa11.94□□□□□ -0.5
FARP1-230ENST00000600380 FZD6O60353 706 aa11.94□□□□□ -0.5
FARP1-230ENST00000600380 ZNF217O75362 1048 aa11.94□□□□□ -0.5
FARP1-230ENST00000600380 METTL18O95568 372 aa11.94□□□□□ -0.5
FARP1-230ENST00000600380 ADRB3P13945 408 aa11.94□□□□□ -0.5
FARP1-230ENST00000600380 PRLRP16471 622 aa11.94□□□□□ -0.5
FARP1-230ENST00000600380 MSNP26038 577 aaKnown RBP11.94□□□□□ -0.5
FARP1-230ENST00000600380 PTGER3P43115 390 aa11.94□□□□□ -0.5
FARP1-230ENST00000600380 PPP2CBP62714 309 aa11.94□□□□□ -0.5
FARP1-230ENST00000600380 PPP2CAP67775 309 aa11.94□□□□□ -0.5
FARP1-230ENST00000600380 BCL2L1Q07817 233 aa11.94□□□□□ -0.5
FARP1-230ENST00000600380 OLIG2Q13516 323 aa11.94□□□□□ -0.5
FARP1-230ENST00000600380 BYSLQ13895 437 aaKnown RBP11.94□□□□□ -0.5
FARP1-230ENST00000600380 CCNG2Q16589 344 aa11.94□□□□□ -0.5
FARP1-230ENST00000600380 TTC31Q49AM3 519 aaPredicted RBP11.94□□□□□ -0.5
FARP1-230ENST00000600380 ANKRD20A2Q5SQ80 823 aa11.94□□□□□ -0.5
FARP1-230ENST00000600380 ANKRD20A1Q5TYW2 823 aa11.94□□□□□ -0.5
FARP1-230ENST00000600380 ANKRD20A3Q5VUR7 823 aa11.94□□□□□ -0.5
FARP1-230ENST00000600380 KDELC1Q6UW63 502 aa11.94□□□□□ -0.5
FARP1-230ENST00000600380 PID1Q7Z2X4 250 aa11.94□□□□□ -0.5
FARP1-230ENST00000600380 KDELC2Q7Z4H8 507 aa11.94□□□□□ -0.5
FARP1-230ENST00000600380 BBS5Q8N3I7 341 aa11.94□□□□□ -0.5
FARP1-230ENST00000600380 TAB3Q8N5C8 712 aaPredicted RBP11.94□□□□□ -0.5
FARP1-230ENST00000600380 SUMF1Q8NBK3 374 aa11.94□□□□□ -0.5
FARP1-230ENST00000600380 OR14C36Q8NHC7 312 aa11.94□□□□□ -0.5
FARP1-230ENST00000600380 PIH1D2Q8WWB5 315 aa11.94□□□□□ -0.5
FARP1-230ENST00000600380 LRIG1Q96JA1 1093 aa11.94□□□□□ -0.5
FARP1-230ENST00000600380 ZNF641Q96N77 438 aaPredicted RBP11.94□□□□□ -0.5
FARP1-230ENST00000600380 SPATA13Q96N96 652 aa11.94□□□□□ -0.5
FARP1-230ENST00000600380 TUBGCP5Q96RT8 1024 aa11.94□□□□□ -0.5
FARP1-230ENST00000600380 PRRX2Q99811 253 aa11.94□□□□□ -0.5
FARP1-230ENST00000600380 ORAI3Q9BRQ5 295 aa11.94□□□□□ -0.5
FARP1-230ENST00000600380 MLPHQ9BV36 600 aaPredicted RBP11.94□□□□□ -0.5
FARP1-230ENST00000600380 OSBPL1AQ9BXW6 950 aa11.94□□□□□ -0.5
FARP1-230ENST00000600380 SLC25A51Q9H1U9 297 aa11.94□□□□□ -0.5
FARP1-230ENST00000600380 ATP13A3Q9H7F0 1226 aa11.94□□□□□ -0.5
FARP1-230ENST00000600380 EBF2Q9HAK2 575 aa11.94□□□□□ -0.5
FARP1-230ENST00000600380 PCDH12Q9NPG4 1184 aa11.94□□□□□ -0.5
FARP1-230ENST00000600380 KLHL8Q9P2G9 620 aaPredicted RBP11.94□□□□□ -0.5
FARP1-230ENST00000600380 DKK3Q9UBP4 350 aa11.94□□□□□ -0.5
FARP1-230ENST00000600380 CHKBQ9Y259 395 aa11.94□□□□□ -0.5
FARP1-230ENST00000600380 FADS3Q9Y5Q0 445 aa11.94□□□□□ -0.5
FARP1-230ENST00000600380 SAR1BQ9Y6B6 198 aa11.94□□□□□ -0.5
FARP1-230ENST00000600380 ANKRD36A6QL64 1941 aa11.94□□□□□ -0.5
FARP1-230ENST00000600380 THADAQ6YHU6 1953 aa11.93□□□□□ -0.5
FARP1-230ENST00000600380 PRR23AA6NEV1 266 aa11.93□□□□□ -0.5
FARP1-230ENST00000600380 FAM47DPA6NHR8 397 aa11.93□□□□□ -0.5
FARP1-230ENST00000600380 PGRMC1O00264 195 aaKnown RBP11.93□□□□□ -0.5
FARP1-230ENST00000600380 MTSS1O43312 755 aa11.93□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 640.5 ms