RNA–Protein interactions for RNA: ENST00000597776.1

LSM4-205, Transcript of LSM4 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 2

Gene LSM4, Length 446 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM4-205ENST00000597776 IGSF6O95976 241 aa10.66□□□□□ -0.7
LSM4-205ENST00000597776 TPM2P07951 284 aa10.66□□□□□ -0.7
LSM4-205ENST00000597776 CELA2BP08218 269 aaPredicted RBP10.66□□□□□ -0.7
LSM4-205ENST00000597776 TIMP2P16035 220 aa10.66□□□□□ -0.7
LSM4-205ENST00000597776 LSSP48449 732 aa10.66□□□□□ -0.7
LSM4-205ENST00000597776 THOP1P52888 689 aa10.66□□□□□ -0.7
LSM4-205ENST00000597776 COPB1P53618 953 aaKnown RBP10.66□□□□□ -0.7
LSM4-205ENST00000597776 GSCP56915 257 aaPredicted RBP10.66□□□□□ -0.7
LSM4-205ENST00000597776 PCBP4P57723 403 aaKnown RBP10.66□□□□□ -0.7
LSM4-205ENST00000597776 RHOAP61586 193 aa10.66□□□□□ -0.7
LSM4-205ENST00000597776 C1QBPQ07021 282 aaKnown RBP10.66□□□□□ -0.7
LSM4-205ENST00000597776 IRF4Q15306 451 aa10.66□□□□□ -0.7
LSM4-205ENST00000597776 NR0B2Q15466 257 aa10.66□□□□□ -0.7
LSM4-205ENST00000597776 TCEA2Q15560 299 aa10.66□□□□□ -0.7
LSM4-205ENST00000597776 ISXQ2M1V0 245 aa10.66□□□□□ -0.7
LSM4-205ENST00000597776 KLHL40Q2TBA0 621 aa10.66□□□□□ -0.7
LSM4-205ENST00000597776 PRRT3Q5FWE3 981 aa10.66□□□□□ -0.7
LSM4-205ENST00000597776 C3orf38Q5JPI3 329 aa10.66□□□□□ -0.7
LSM4-205ENST00000597776 CT47A1Q5JQC4 288 aaPredicted RBP10.66□□□□□ -0.7
LSM4-205ENST00000597776 EFHC2Q5JST6 749 aa10.66□□□□□ -0.7
LSM4-205ENST00000597776 SCYL2Q6P3W7 929 aa10.66□□□□□ -0.7
LSM4-205ENST00000597776 MON1BQ7L1V2 547 aa10.66□□□□□ -0.7
LSM4-205ENST00000597776 GPR155Q7Z3F1 870 aa10.66□□□□□ -0.7
LSM4-205ENST00000597776 SLFN11Q7Z7L1 901 aa10.66□□□□□ -0.7
LSM4-205ENST00000597776 PHF13Q86YI8 300 aaPredicted RBP10.66□□□□□ -0.7
LSM4-205ENST00000597776 SLC35F3Q8IY50 421 aa10.66□□□□□ -0.7
LSM4-205ENST00000597776 PHACTR4Q8IZ21 702 aa10.66□□□□□ -0.7
LSM4-205ENST00000597776 TP53I13Q8NBR0 393 aaPredicted RBP10.66□□□□□ -0.7
LSM4-205ENST00000597776 C3orf20Q8ND61 904 aa10.66□□□□□ -0.7
LSM4-205ENST00000597776 ZNF248Q8NDW4 579 aa10.66□□□□□ -0.7
LSM4-205ENST00000597776 CXorf40AQ8TE69 158 aa10.66□□□□□ -0.7
LSM4-205ENST00000597776 ARHGEF26Q96DR7 871 aa10.66□□□□□ -0.7
LSM4-205ENST00000597776 ATXN7L3BQ96GX2 97 aa10.66□□□□□ -0.7
LSM4-205ENST00000597776 PCMTD1Q96MG8 357 aaPredicted RBP10.66□□□□□ -0.7
LSM4-205ENST00000597776 ZNF578Q96N58 590 aaPredicted RBP10.66□□□□□ -0.7
LSM4-205ENST00000597776 MCEEQ96PE7 176 aa10.66□□□□□ -0.7
LSM4-205ENST00000597776 IL12RB2Q99665 862 aa10.66□□□□□ -0.7
LSM4-205ENST00000597776 EPAS1Q99814 870 aa10.66□□□□□ -0.7
LSM4-205ENST00000597776 TTYH3Q9C0H2 523 aa10.66□□□□□ -0.7
LSM4-205ENST00000597776 RETREG1Q9H6L5 497 aa10.66□□□□□ -0.7
LSM4-205ENST00000597776 POLR1BQ9H9Y6 1135 aa10.66□□□□□ -0.7
LSM4-205ENST00000597776 ASCL3Q9NQ33 180 aa10.66□□□□□ -0.7
LSM4-205ENST00000597776 SPASTQ9UBP0 616 aa10.66□□□□□ -0.7
LSM4-205ENST00000597776 LHX3Q9UBR4 397 aa10.66□□□□□ -0.7
LSM4-205ENST00000597776 SATB2Q9UPW6 733 aa10.66□□□□□ -0.7
LSM4-205ENST00000597776 COQ6Q9Y2Z9 468 aa10.66□□□□□ -0.7
LSM4-205ENST00000597776 SHROOM3Q8TF72 1996 aa10.65□□□□□ -0.7
LSM4-205ENST00000597776 TCRBV5S1A1TA0A578 114 aa10.65□□□□□ -0.7
LSM4-205ENST00000597776 EME2A4GXA9 379 aaPredicted RBP10.65□□□□□ -0.7
LSM4-205ENST00000597776 ZSCAN5CA6NGD5 496 aaPredicted RBP10.65□□□□□ -0.7
LSM4-205ENST00000597776 SIGLEC16A6NMB1 481 aa10.65□□□□□ -0.7
LSM4-205ENST00000597776 LGALS16A8MUM7 142 aa10.65□□□□□ -0.7
LSM4-205ENST00000597776 RASA4BC9J798 803 aa10.65□□□□□ -0.7
LSM4-205ENST00000597776 RASA4O43374 803 aa10.65□□□□□ -0.7
LSM4-205ENST00000597776 TM7SF2O76062 418 aa10.65□□□□□ -0.7
LSM4-205ENST00000597776 DXOO77932 396 aaKnown RBP10.65□□□□□ -0.7
LSM4-205ENST00000597776 ZIC2O95409 532 aaPredicted RBP10.65□□□□□ -0.7
LSM4-205ENST00000597776 CALB1P05937 261 aa10.65□□□□□ -0.7
LSM4-205ENST00000597776 EIF4A3P38919 411 aaKnown RBP10.65□□□□□ -0.7
LSM4-205ENST00000597776 ZNF143P52747 638 aaPredicted RBP10.65□□□□□ -0.7
LSM4-205ENST00000597776 ADKP55263 362 aaKnown RBP10.65□□□□□ -0.7
LSM4-205ENST00000597776 RPL7AP62424 266 aaKnown RBP10.65□□□□□ -0.7
LSM4-205ENST00000597776 CYTH1Q15438 398 aa10.65□□□□□ -0.7
LSM4-205ENST00000597776 FAXCQ5TGI0 409 aa10.65□□□□□ -0.7
LSM4-205ENST00000597776 DNAJC24Q6P3W2 148 aa10.65□□□□□ -0.7
LSM4-205ENST00000597776 PCSK4Q6UW60 755 aa10.65□□□□□ -0.7
LSM4-205ENST00000597776 MACC1Q6ZN28 852 aa10.65□□□□□ -0.7
LSM4-205ENST00000597776 NYAP1Q6ZVC0 841 aa10.65□□□□□ -0.7
LSM4-205ENST00000597776 NEK11Q8NG66 645 aa10.65□□□□□ -0.7
LSM4-205ENST00000597776 BTN2A2Q8WVV5 523 aa10.65□□□□□ -0.7
LSM4-205ENST00000597776 VCPIP1Q96JH7 1222 aa10.65□□□□□ -0.7
LSM4-205ENST00000597776 BOCQ9BWV1 1114 aa10.65□□□□□ -0.7
LSM4-205ENST00000597776 C1QTNF7Q9BXJ2 289 aa10.65□□□□□ -0.7
LSM4-205ENST00000597776 SLC13A1Q9BZW2 595 aa10.65□□□□□ -0.7
LSM4-205ENST00000597776 CLPBQ9H078 707 aa10.65□□□□□ -0.7
LSM4-205ENST00000597776 SYNDIG1Q9H7V2 258 aa10.65□□□□□ -0.7
LSM4-205ENST00000597776 CPNE5Q9HCH3 593 aa10.65□□□□□ -0.7
LSM4-205ENST00000597776 LMBRD1Q9NUN5 540 aa10.65□□□□□ -0.7
LSM4-205ENST00000597776 GPATCH2LQ9NWQ4 482 aa10.65□□□□□ -0.7
LSM4-205ENST00000597776 NCKIPSDQ9NZQ3 722 aa10.65□□□□□ -0.7
LSM4-205ENST00000597776 SALL4Q9UJQ4 1053 aa10.65□□□□□ -0.7
LSM4-205ENST00000597776 FZD10Q9ULW2 581 aa10.65□□□□□ -0.7
LSM4-205ENST00000597776 ENTPD2Q9Y5L3 495 aa10.65□□□□□ -0.7
LSM4-205ENST00000597776 CFAP46Q8IYW2 2715 aa10.65□□□□□ -0.7
LSM4-205ENST00000597776 LMO7DNF2Z398 122 aa10.64□□□□□ -0.71
LSM4-205ENST00000597776 TPP1O14773 563 aa10.64□□□□□ -0.71
LSM4-205ENST00000597776 YY2O15391 372 aa10.64□□□□□ -0.71
LSM4-205ENST00000597776 KLK10O43240 276 aa10.64□□□□□ -0.71
LSM4-205ENST00000597776 LZTS3O60299 673 aaPredicted RBP10.64□□□□□ -0.71
LSM4-205ENST00000597776 PRKCGP05129 697 aa10.64□□□□□ -0.71
LSM4-205ENST00000597776 ANXA6P08133 673 aa10.64□□□□□ -0.71
LSM4-205ENST00000597776 TSHRP16473 764 aa10.64□□□□□ -0.71
LSM4-205ENST00000597776 YBEYP58557 167 aaPredicted RBP10.64□□□□□ -0.71
LSM4-205ENST00000597776 ERVPABLB-1P60509 514 aa10.64□□□□□ -0.71
LSM4-205ENST00000597776 YPEL5P62699 121 aa10.64□□□□□ -0.71
LSM4-205ENST00000597776 OGDHQ02218 1023 aa10.64□□□□□ -0.71
LSM4-205ENST00000597776 RAD51Q06609 339 aa10.64□□□□□ -0.71
LSM4-205ENST00000597776 C19orf57Q0VDD7 668 aa10.64□□□□□ -0.71
LSM4-205ENST00000597776 SERINC3Q13530 473 aa10.64□□□□□ -0.71
LSM4-205ENST00000597776 PTK2BQ14289 1009 aa10.64□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms