RNA–Protein interactions for RNA: ENST00000597724.6

SSBP4-204, Transcript of single stranded DNA binding protein 4, humanhuman

TSL 5

Gene SSBP4, Length 865 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP4-204ENST00000597724 PRAMEF26H0Y7S4 382 aa16.91■□□□□ 0.3
SSBP4-204ENST00000597724 SLC31A1O15431 190 aa16.91■□□□□ 0.3
SSBP4-204ENST00000597724 TSPAN6O43657 245 aa16.91■□□□□ 0.3
SSBP4-204ENST00000597724 CER1O95813 267 aa16.91■□□□□ 0.3
SSBP4-204ENST00000597724 KRT1P04264 644 aa16.91■□□□□ 0.3
SSBP4-204ENST00000597724 TNNT1P13805 278 aa16.91■□□□□ 0.3
SSBP4-204ENST00000597724 TIMP2P16035 220 aa16.91■□□□□ 0.3
SSBP4-204ENST00000597724 HSPA9P38646 679 aaKnown RBP16.91■□□□□ 0.3
SSBP4-204ENST00000597724 GARSP41250 739 aaKnown RBP16.91■□□□□ 0.3
SSBP4-204ENST00000597724 CTSKP43235 329 aa16.91■□□□□ 0.3
SSBP4-204ENST00000597724 SLC10A2Q12908 348 aaPredicted RBP16.91■□□□□ 0.3
SSBP4-204ENST00000597724 SLC14A1Q13336 389 aa16.91■□□□□ 0.3
SSBP4-204ENST00000597724 ZNF235Q14590 738 aa16.91■□□□□ 0.3
SSBP4-204ENST00000597724 IFI16Q16666 785 aaKnown RBP16.91■□□□□ 0.3
SSBP4-204ENST00000597724 MARC1Q5VT66 337 aa16.91■□□□□ 0.3
SSBP4-204ENST00000597724 SLC9A4Q6AI14 798 aa16.91■□□□□ 0.3
SSBP4-204ENST00000597724 C11orf63Q6NUN7 778 aa16.91■□□□□ 0.3
SSBP4-204ENST00000597724 CAMK1DQ8IU85 385 aa16.91■□□□□ 0.3
SSBP4-204ENST00000597724 ACRBPQ8NEB7 543 aa16.91■□□□□ 0.3
SSBP4-204ENST00000597724 TPCN2Q8NHX9 752 aa16.91■□□□□ 0.3
SSBP4-204ENST00000597724 NSMCE1Q8WV22 266 aa16.91■□□□□ 0.3
SSBP4-204ENST00000597724 SKA1Q96BD8 255 aa16.91■□□□□ 0.3
SSBP4-204ENST00000597724 TSGA13Q96PP4 275 aa16.91■□□□□ 0.3
SSBP4-204ENST00000597724 ATP13A3Q9H7F0 1226 aa16.91■□□□□ 0.3
SSBP4-204ENST00000597724 IL21RQ9HBE5 538 aa16.91■□□□□ 0.3
SSBP4-204ENST00000597724 GGT7Q9UJ14 662 aa16.91■□□□□ 0.3
SSBP4-204ENST00000597724 ITM2BQ9Y287 266 aa16.91■□□□□ 0.3
SSBP4-204ENST00000597724 DUSP10Q9Y6W6 482 aa16.91■□□□□ 0.3
SSBP4-204ENST00000597724 SHROOM3Q8TF72 1996 aa16.91■□□□□ 0.3
SSBP4-204ENST00000597724 TSPAN11A1L157 253 aa16.9■□□□□ 0.3
SSBP4-204ENST00000597724 NEMP1O14524 444 aa16.9■□□□□ 0.3
SSBP4-204ENST00000597724 MATN3O15232 486 aa16.9■□□□□ 0.3
SSBP4-204ENST00000597724 PJA2O43164 708 aa16.9■□□□□ 0.3
SSBP4-204ENST00000597724 PSTPIP1O43586 416 aa16.9■□□□□ 0.3
SSBP4-204ENST00000597724 MAP3K6O95382 1288 aa16.9■□□□□ 0.3
SSBP4-204ENST00000597724 ZNF883P0CG24 379 aa16.9■□□□□ 0.3
SSBP4-204ENST00000597724 CD59P13987 128 aa16.9■□□□□ 0.3
SSBP4-204ENST00000597724 PRLRP16471 622 aa16.9■□□□□ 0.3
SSBP4-204ENST00000597724 CR2P20023 1033 aa16.9■□□□□ 0.3
SSBP4-204ENST00000597724 CCNCP24863 283 aa16.9■□□□□ 0.3
SSBP4-204ENST00000597724 SERPINA4P29622 427 aa16.9■□□□□ 0.3
SSBP4-204ENST00000597724 MMP13P45452 471 aa16.9■□□□□ 0.3
SSBP4-204ENST00000597724 SCNN1BP51168 640 aa16.9■□□□□ 0.3
SSBP4-204ENST00000597724 SUOXP51687 545 aa16.9■□□□□ 0.3
SSBP4-204ENST00000597724 VAV2P52735 878 aa16.9■□□□□ 0.3
SSBP4-204ENST00000597724 C21orf59P57076 290 aa16.9■□□□□ 0.3
SSBP4-204ENST00000597724 AP1S1P61966 158 aa16.9■□□□□ 0.3
SSBP4-204ENST00000597724 GBE1Q04446 702 aa16.9■□□□□ 0.3
SSBP4-204ENST00000597724 BCL2L1Q07817 233 aa16.9■□□□□ 0.3
SSBP4-204ENST00000597724 HNRNPDQ14103 355 aaKnown RBP16.9■□□□□ 0.3
SSBP4-204ENST00000597724 STAT4Q14765 748 aa16.9■□□□□ 0.3
SSBP4-204ENST00000597724 SLC45A4Q5BKX6 768 aa16.9■□□□□ 0.3
SSBP4-204ENST00000597724 LRRC73Q5JTD7 316 aa16.9■□□□□ 0.3
SSBP4-204ENST00000597724 IQCHQ86VS3 1027 aa16.9■□□□□ 0.3
SSBP4-204ENST00000597724 ZSCAN30Q86W11 494 aa16.9■□□□□ 0.3
SSBP4-204ENST00000597724 BBS5Q8N3I7 341 aa16.9■□□□□ 0.3
SSBP4-204ENST00000597724 PGBD5Q8N414 524 aa16.9■□□□□ 0.3
SSBP4-204ENST00000597724 TEX26Q8N6G2 289 aa16.9■□□□□ 0.3
SSBP4-204ENST00000597724 PLD5Q8N7P1 536 aa16.9■□□□□ 0.3
SSBP4-204ENST00000597724 MFSD2AQ8NA29 543 aa16.9■□□□□ 0.3
SSBP4-204ENST00000597724 TMEM145Q8NBT3 493 aa16.9■□□□□ 0.3
SSBP4-204ENST00000597724 FATE1Q969F0 183 aa16.9■□□□□ 0.3
SSBP4-204ENST00000597724 RNF25Q96BH1 459 aaPredicted RBP16.9■□□□□ 0.3
SSBP4-204ENST00000597724 CALR3Q96L12 384 aaKnown RBP16.9■□□□□ 0.3
SSBP4-204ENST00000597724 NSMCE3Q96MG7 304 aa16.9■□□□□ 0.3
SSBP4-204ENST00000597724 C1QTNF2Q9BXJ5 285 aa16.9■□□□□ 0.3
SSBP4-204ENST00000597724 SLC17A9Q9BYT1 436 aa16.9■□□□□ 0.3
SSBP4-204ENST00000597724 LACRTQ9GZZ8 138 aa16.9■□□□□ 0.3
SSBP4-204ENST00000597724 DTLQ9NZJ0 730 aa16.9■□□□□ 0.3
SSBP4-204ENST00000597724 CABIN1Q9Y6J0 2220 aa16.89■□□□□ 0.29
SSBP4-204ENST00000597724 TTC24A2A3L6 582 aaPredicted RBP16.89■□□□□ 0.29
SSBP4-204ENST00000597724 IGLON5A6NGN9 336 aa16.89■□□□□ 0.29
SSBP4-204ENST00000597724 GOLGA6L6A8MZA4 724 aa16.89■□□□□ 0.29
SSBP4-204ENST00000597724 TLR4O00206 839 aa16.89■□□□□ 0.29
SSBP4-204ENST00000597724 TRAFD1O14545 582 aaPredicted RBP16.89■□□□□ 0.29
SSBP4-204ENST00000597724 KCNK3O14649 394 aa16.89■□□□□ 0.29
SSBP4-204ENST00000597724 KCNK5O95279 499 aa16.89■□□□□ 0.29
SSBP4-204ENST00000597724 ITIH2P19823 946 aa16.89■□□□□ 0.29
SSBP4-204ENST00000597724 CSRP1P21291 193 aaKnown RBP16.89■□□□□ 0.29
SSBP4-204ENST00000597724 HNRNPA2B1P22626 353 aaKnown RBP16.89■□□□□ 0.29
SSBP4-204ENST00000597724 NXPH1P58417 271 aa16.89■□□□□ 0.29
SSBP4-204ENST00000597724 OVGP1Q12889 678 aa16.89■□□□□ 0.29
SSBP4-204ENST00000597724 TAZQ16635 292 aa16.89■□□□□ 0.29
SSBP4-204ENST00000597724 UGP2Q16851 508 aa16.89■□□□□ 0.29
SSBP4-204ENST00000597724 ZNF423Q2M1K9 1284 aa16.89■□□□□ 0.29
SSBP4-204ENST00000597724 ODF2Q5BJF6 829 aa16.89■□□□□ 0.29
SSBP4-204ENST00000597724 PPM1JQ5JR12 505 aa16.89■□□□□ 0.29
SSBP4-204ENST00000597724 BRAT1Q6PJG6 821 aa16.89■□□□□ 0.29
SSBP4-204ENST00000597724 MFSD7Q6UXD7 560 aa16.89■□□□□ 0.29
SSBP4-204ENST00000597724 PIP4P1Q86T03 277 aa16.89■□□□□ 0.29
SSBP4-204ENST00000597724 DAAM2Q86T65 1068 aa16.89■□□□□ 0.29
SSBP4-204ENST00000597724 ZSWIM9Q86XI8 627 aa16.89■□□□□ 0.29
SSBP4-204ENST00000597724 MAML1Q92585 1016 aa16.89■□□□□ 0.29
SSBP4-204ENST00000597724 ECHDC3Q96DC8 303 aa16.89■□□□□ 0.29
SSBP4-204ENST00000597724 NUDCD1Q96RS6 583 aa16.89■□□□□ 0.29
SSBP4-204ENST00000597724 MGME1Q9BQP7 344 aa16.89■□□□□ 0.29
SSBP4-204ENST00000597724 MAK16Q9BXY0 300 aaKnown RBP16.89■□□□□ 0.29
SSBP4-204ENST00000597724 TM7SF3Q9NS93 570 aa16.89■□□□□ 0.29
SSBP4-204ENST00000597724 CA5BQ9Y2D0 317 aa16.89■□□□□ 0.29
SSBP4-204ENST00000597724 FNDC3AQ9Y2H6 1198 aaKnown RBP16.89■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms