RNA–Protein interactions for RNA: ENST00000597136.1

TRIM28-207, Transcript of tripartite motif containing 28, humanhuman

TSL 2

Gene TRIM28, Length 1,552 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM28-207ENST00000597136 LEFTY1O75610 366 aa15.18■□□□□ 0.02
TRIM28-207ENST00000597136 GAS8O95995 478 aa15.18■□□□□ 0.02
TRIM28-207ENST00000597136 CCNB1P14635 433 aa15.18■□□□□ 0.02
TRIM28-207ENST00000597136 ACSL1P33121 698 aa15.18■□□□□ 0.02
TRIM28-207ENST00000597136 CNR2P34972 360 aa15.18■□□□□ 0.02
TRIM28-207ENST00000597136 RECQLP46063 649 aaPredicted RBP15.18■□□□□ 0.02
TRIM28-207ENST00000597136 MRPS25P82663 173 aaKnown RBP15.18■□□□□ 0.02
TRIM28-207ENST00000597136 WASHC5Q12768 1159 aa15.18■□□□□ 0.02
TRIM28-207ENST00000597136 LBRQ14739 615 aaKnown RBP15.18■□□□□ 0.02
TRIM28-207ENST00000597136 KCTD19Q17RG1 926 aaPredicted RBP15.18■□□□□ 0.02
TRIM28-207ENST00000597136 MYLK3Q32MK0 819 aa15.18■□□□□ 0.02
TRIM28-207ENST00000597136 PLK5Q496M5 336 aa15.18■□□□□ 0.02
TRIM28-207ENST00000597136 ZC3H14Q6PJT7 736 aaKnown RBP15.18■□□□□ 0.02
TRIM28-207ENST00000597136 PLPP6Q8IY26 295 aa15.18■□□□□ 0.02
TRIM28-207ENST00000597136 TMEFF1Q8IYR6 380 aa15.18■□□□□ 0.02
TRIM28-207ENST00000597136 PGBD5Q8N414 524 aa15.18■□□□□ 0.02
TRIM28-207ENST00000597136 CASKIN2Q8WXE0 1202 aa15.18■□□□□ 0.02
TRIM28-207ENST00000597136 MAML1Q92585 1016 aa15.18■□□□□ 0.02
TRIM28-207ENST00000597136 ARRDC3Q96B67 414 aa15.18■□□□□ 0.02
TRIM28-207ENST00000597136 ZNF599Q96NL3 588 aa15.18■□□□□ 0.02
TRIM28-207ENST00000597136 HEPHQ9BQS7 1158 aa15.18■□□□□ 0.02
TRIM28-207ENST00000597136 LRRC1Q9BTT6 524 aa15.18■□□□□ 0.02
TRIM28-207ENST00000597136 ZDHHC6Q9H6R6 413 aa15.18■□□□□ 0.02
TRIM28-207ENST00000597136 WSB2Q9NYS7 404 aaPredicted RBP15.18■□□□□ 0.02
TRIM28-207ENST00000597136 IL36AQ9UHA7 158 aa15.18■□□□□ 0.02
TRIM28-207ENST00000597136 ARIH1Q9Y4X5 557 aaPredicted RBP15.18■□□□□ 0.02
TRIM28-207ENST00000597136 C5orf60A6NFR6 353 aa15.17■□□□□ 0.02
TRIM28-207ENST00000597136 EFCAB8A8MWE9 144 aa15.17■□□□□ 0.02
TRIM28-207ENST00000597136 ALOX15BO15296 676 aa15.17■□□□□ 0.02
TRIM28-207ENST00000597136 MAP3K13O43283 966 aa15.17■□□□□ 0.02
TRIM28-207ENST00000597136 ZNF217O75362 1048 aa15.17■□□□□ 0.02
TRIM28-207ENST00000597136 GSRP00390 522 aa15.17■□□□□ 0.02
TRIM28-207ENST00000597136 IFNB1P01574 187 aa15.17■□□□□ 0.02
TRIM28-207ENST00000597136 JCHAINP01591 159 aa15.17■□□□□ 0.02
TRIM28-207ENST00000597136 ETS1P14921 441 aa15.17■□□□□ 0.02
TRIM28-207ENST00000597136 PTPN3P26045 913 aa15.17■□□□□ 0.02
TRIM28-207ENST00000597136 SNRPD1P62314 119 aaKnown RBP15.17■□□□□ 0.02
TRIM28-207ENST00000597136 IFI35P80217 286 aaPredicted RBP15.17■□□□□ 0.02
TRIM28-207ENST00000597136 HNRNPDQ14103 355 aaKnown RBP15.17■□□□□ 0.02
TRIM28-207ENST00000597136 GLE1Q53GS7 698 aaKnown RBP15.17■□□□□ 0.02
TRIM28-207ENST00000597136 C8orf74Q6P047 294 aa15.17■□□□□ 0.02
TRIM28-207ENST00000597136 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP15.17■□□□□ 0.02
TRIM28-207ENST00000597136 PRUNE1Q86TP1 453 aa15.17■□□□□ 0.02
TRIM28-207ENST00000597136 JAMLQ86YT9 394 aa15.17■□□□□ 0.02
TRIM28-207ENST00000597136 HDDC3Q8N4P3 179 aa15.17■□□□□ 0.02
TRIM28-207ENST00000597136 CCDC89Q8N998 374 aa15.17■□□□□ 0.02
TRIM28-207ENST00000597136 GLIS1Q8NBF1 620 aa15.17■□□□□ 0.02
TRIM28-207ENST00000597136 TMIEQ8NEW7 156 aa15.17■□□□□ 0.02
TRIM28-207ENST00000597136 GANCQ8TET4 914 aa15.17■□□□□ 0.02
TRIM28-207ENST00000597136 TOE1Q96GM8 510 aaKnown RBP15.17■□□□□ 0.02
TRIM28-207ENST00000597136 EPC1Q9H2F5 836 aa15.17■□□□□ 0.02
TRIM28-207ENST00000597136 FARP1Q9Y4F1 1045 aaPredicted RBP15.17■□□□□ 0.02
TRIM28-207ENST00000597136 FAM187AA6NFU0 413 aa15.16■□□□□ 0.02
TRIM28-207ENST00000597136 KPNA3O00505 521 aaPredicted RBP15.16■□□□□ 0.02
TRIM28-207ENST00000597136 GCATO75600 419 aa15.16■□□□□ 0.02
TRIM28-207ENST00000597136 RNASEH2AO75792 299 aaKnown RBP15.16■□□□□ 0.02
TRIM28-207ENST00000597136 STK10O94804 968 aaKnown RBP15.16■□□□□ 0.02
TRIM28-207ENST00000597136 POP4O95707 220 aaKnown RBP15.16■□□□□ 0.02
TRIM28-207ENST00000597136 ADH1BP00325 375 aa15.16■□□□□ 0.02
TRIM28-207ENST00000597136 IGLV3-19P01714 112 aa15.16■□□□□ 0.02
TRIM28-207ENST00000597136 KRT14P02533 472 aa15.16■□□□□ 0.02
TRIM28-207ENST00000597136 ZSCAN5DPP0CG00 497 aa15.16■□□□□ 0.02
TRIM28-207ENST00000597136 C5AR1P21730 350 aa15.16■□□□□ 0.02
TRIM28-207ENST00000597136 RENBPP51606 427 aa15.16■□□□□ 0.02
TRIM28-207ENST00000597136 MAXP61244 160 aa15.16■□□□□ 0.02
TRIM28-207ENST00000597136 TUBB4BP68371 445 aa15.16■□□□□ 0.02
TRIM28-207ENST00000597136 ZBTB16Q05516 673 aa15.16■□□□□ 0.02
TRIM28-207ENST00000597136 CNTN1Q12860 1018 aa15.16■□□□□ 0.02
TRIM28-207ENST00000597136 ZBTB17Q13105 803 aa15.16■□□□□ 0.02
TRIM28-207ENST00000597136 PPP1R7Q15435 360 aa15.16■□□□□ 0.02
TRIM28-207ENST00000597136 TRIP13Q15645 432 aaPredicted RBP15.16■□□□□ 0.02
TRIM28-207ENST00000597136 TEX44Q53QW1 395 aa15.16■□□□□ 0.02
TRIM28-207ENST00000597136 TMCO4Q5TGY1 634 aa15.16■□□□□ 0.02
TRIM28-207ENST00000597136 SYDE1Q6ZW31 735 aaPredicted RBP15.16■□□□□ 0.02
TRIM28-207ENST00000597136 TEX26Q8N6G2 289 aa15.16■□□□□ 0.02
TRIM28-207ENST00000597136 ZC3H10Q96K80 434 aaKnown RBP15.16■□□□□ 0.02
TRIM28-207ENST00000597136 VAT1Q99536 393 aa15.16■□□□□ 0.02
TRIM28-207ENST00000597136 IL12RB2Q99665 862 aa15.16■□□□□ 0.02
TRIM28-207ENST00000597136 CINPQ9BW66 212 aaPredicted RBP15.16■□□□□ 0.02
TRIM28-207ENST00000597136 CEP41Q9BYV8 373 aa15.16■□□□□ 0.02
TRIM28-207ENST00000597136 PROB1E7EW31 1015 aa15.15■□□□□ 0.02
TRIM28-207ENST00000597136 IGSF6O95976 241 aa15.15■□□□□ 0.02
TRIM28-207ENST00000597136 CD6P30203 668 aa15.15■□□□□ 0.02
TRIM28-207ENST00000597136 PTGER3P43115 390 aa15.15■□□□□ 0.02
TRIM28-207ENST00000597136 PTK6Q13882 451 aa15.15■□□□□ 0.02
TRIM28-207ENST00000597136 RFTN1Q14699 578 aaPredicted RBP15.15■□□□□ 0.02
TRIM28-207ENST00000597136 P3H1Q32P28 736 aa15.15■□□□□ 0.02
TRIM28-207ENST00000597136 ANKRD20A2Q5SQ80 823 aa15.15■□□□□ 0.02
TRIM28-207ENST00000597136 TEX35Q5T0J7 233 aa15.15■□□□□ 0.02
TRIM28-207ENST00000597136 ANKRD20A1Q5TYW2 823 aa15.15■□□□□ 0.02
TRIM28-207ENST00000597136 MARC1Q5VT66 337 aa15.15■□□□□ 0.02
TRIM28-207ENST00000597136 ANKRD20A3Q5VUR7 823 aa15.15■□□□□ 0.02
TRIM28-207ENST00000597136 DSG4Q86SJ6 1040 aa15.15■□□□□ 0.02
TRIM28-207ENST00000597136 SRLQ86TD4 932 aa15.15■□□□□ 0.02
TRIM28-207ENST00000597136 ZNF567Q8N184 647 aa15.15■□□□□ 0.02
TRIM28-207ENST00000597136 CCDC110Q8TBZ0 833 aa15.15■□□□□ 0.02
TRIM28-207ENST00000597136 NSMCE1Q8WV22 266 aa15.15■□□□□ 0.02
TRIM28-207ENST00000597136 GDAP1L1Q96MZ0 367 aa15.15■□□□□ 0.02
TRIM28-207ENST00000597136 SPATA13Q96N96 652 aa15.15■□□□□ 0.02
TRIM28-207ENST00000597136 PSKH2Q96QS6 385 aa15.15■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 39.9 ms