RNA–Protein interactions for RNA: ENST00000596814.5

VRK3-212, Transcript of vaccinia related kinase 3, humanhuman

TSL 2

Gene VRK3, Length 1,736 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3-212ENST00000596814 ARIH1Q9Y4X5 557 aaPredicted RBP14.8□□□□□ -0.04
VRK3-212ENST00000596814 PCDHGC4Q9Y5F7 938 aa14.8□□□□□ -0.04
VRK3-212ENST00000596814 MYLKQ15746 1914 aa14.8□□□□□ -0.04
VRK3-212ENST00000596814 F5P12259 2224 aa14.8□□□□□ -0.04
VRK3-212ENST00000596814 LOC285095A0A1B0GVY8 99 aa14.8□□□□□ -0.04
VRK3-212ENST00000596814 ALOX15BO15296 676 aa14.8□□□□□ -0.04
VRK3-212ENST00000596814 SOCS5O75159 536 aa14.8□□□□□ -0.04
VRK3-212ENST00000596814 CPP00450 1065 aa14.8□□□□□ -0.04
VRK3-212ENST00000596814 EPOP01588 193 aa14.8□□□□□ -0.04
VRK3-212ENST00000596814 GLULP15104 373 aa14.8□□□□□ -0.04
VRK3-212ENST00000596814 HLA-DPA1P20036 260 aa14.8□□□□□ -0.04
VRK3-212ENST00000596814 MGAT1P26572 445 aa14.8□□□□□ -0.04
VRK3-212ENST00000596814 TNFRSF4P43489 277 aa14.8□□□□□ -0.04
VRK3-212ENST00000596814 CHRNA4P43681 627 aa14.8□□□□□ -0.04
VRK3-212ENST00000596814 BCL2L1Q07817 233 aa14.8□□□□□ -0.04
VRK3-212ENST00000596814 PON2Q15165 354 aa14.8□□□□□ -0.04
VRK3-212ENST00000596814 E2F5Q15329 346 aa14.8□□□□□ -0.04
VRK3-212ENST00000596814 SLC1A5Q15758 541 aa14.8□□□□□ -0.04
VRK3-212ENST00000596814 MYLK3Q32MK0 819 aa14.8□□□□□ -0.04
VRK3-212ENST00000596814 CCDC38Q502W7 563 aa14.8□□□□□ -0.04
VRK3-212ENST00000596814 HP1BP3Q5SSJ5 553 aaPredicted RBP14.8□□□□□ -0.04
VRK3-212ENST00000596814 EGFLAMQ63HQ2 1017 aa14.8□□□□□ -0.04
VRK3-212ENST00000596814 DENND5AQ6IQ26 1287 aa14.8□□□□□ -0.04
VRK3-212ENST00000596814 SERPINA13PQ6UXR4 307 aa14.8□□□□□ -0.04
VRK3-212ENST00000596814 TRMT10CQ7L0Y3 403 aaKnown RBP14.8□□□□□ -0.04
VRK3-212ENST00000596814 ANKMY2Q8IV38 441 aa14.8□□□□□ -0.04
VRK3-212ENST00000596814 AGGF1Q8N302 714 aaeCLIP14.8□□□□□ -0.04
VRK3-212ENST00000596814 SLC25A41Q8N5S1 370 aa14.8□□□□□ -0.04
VRK3-212ENST00000596814 FBXO36Q8NEA4 188 aa14.8□□□□□ -0.04
VRK3-212ENST00000596814 OR2A12Q8NGT7 310 aa14.8□□□□□ -0.04
VRK3-212ENST00000596814 C9orf72Q96LT7 481 aa14.8□□□□□ -0.04
VRK3-212ENST00000596814 TUBGCP5Q96RT8 1024 aa14.8□□□□□ -0.04
VRK3-212ENST00000596814 TRIB3Q96RU7 358 aa14.8□□□□□ -0.04
VRK3-212ENST00000596814 WDR83Q9BRX9 315 aaKnown RBP14.8□□□□□ -0.04
VRK3-212ENST00000596814 ZDHHC6Q9H6R6 413 aa14.8□□□□□ -0.04
VRK3-212ENST00000596814 ARNT2Q9HBZ2 717 aa14.8□□□□□ -0.04
VRK3-212ENST00000596814 BFARQ9NZS9 450 aa14.8□□□□□ -0.04
VRK3-212ENST00000596814 THAP10Q9P2Z0 257 aaPredicted RBP14.8□□□□□ -0.04
VRK3-212ENST00000596814 CHMP2BQ9UQN3 213 aa14.8□□□□□ -0.04
VRK3-212ENST00000596814 CHKBQ9Y259 395 aa14.8□□□□□ -0.04
VRK3-212ENST00000596814 TEX264Q9Y6I9 313 aa14.8□□□□□ -0.04
VRK3-212ENST00000596814 TCF20Q9UGU0 1960 aaKnown RBP14.8□□□□□ -0.04
VRK3-212ENST00000596814 EDDM13A0A1B0GTR0 161 aa14.79□□□□□ -0.04
VRK3-212ENST00000596814 SDR42E2A6NKP2 422 aa14.79□□□□□ -0.04
VRK3-212ENST00000596814 WASH3PC4AMC7 463 aa14.79□□□□□ -0.04
VRK3-212ENST00000596814 PIGNO95427 931 aa14.79□□□□□ -0.04
VRK3-212ENST00000596814 POP4O95707 220 aaKnown RBP14.79□□□□□ -0.04
VRK3-212ENST00000596814 NDST3O95803 873 aa14.79□□□□□ -0.04
VRK3-212ENST00000596814 FGF1P05230 155 aa14.79□□□□□ -0.04
VRK3-212ENST00000596814 ATXN1LP0C7T5 689 aaKnown RBP14.79□□□□□ -0.04
VRK3-212ENST00000596814 SERPINA4P29622 427 aa14.79□□□□□ -0.04
VRK3-212ENST00000596814 GKP32189 559 aa14.79□□□□□ -0.04
VRK3-212ENST00000596814 ELK3P41970 407 aa14.79□□□□□ -0.04
VRK3-212ENST00000596814 GALNT3Q14435 633 aa14.79□□□□□ -0.04
VRK3-212ENST00000596814 GRM3Q14832 879 aa14.79□□□□□ -0.04
VRK3-212ENST00000596814 TMEM196Q5HYL7 178 aa14.79□□□□□ -0.04
VRK3-212ENST00000596814 SIRPB2Q5JXA9 342 aa14.79□□□□□ -0.04
VRK3-212ENST00000596814 MPP5Q8N3R9 675 aa14.79□□□□□ -0.04
VRK3-212ENST00000596814 ZNF366Q8N895 744 aa14.79□□□□□ -0.04
VRK3-212ENST00000596814 CHST14Q8NCH0 376 aa14.79□□□□□ -0.04
VRK3-212ENST00000596814 PYROXD1Q8WU10 500 aa14.79□□□□□ -0.04
VRK3-212ENST00000596814 PDCD6IPQ8WUM4 868 aaKnown RBP14.79□□□□□ -0.04
VRK3-212ENST00000596814 UBLCP1Q8WVY7 318 aaPredicted RBP14.79□□□□□ -0.04
VRK3-212ENST00000596814 SIGLEC10Q96LC7 697 aa14.79□□□□□ -0.04
VRK3-212ENST00000596814 TTC25Q96NG3 672 aa14.79□□□□□ -0.04
VRK3-212ENST00000596814 SEMA4AQ9H3S1 761 aa14.79□□□□□ -0.04
VRK3-212ENST00000596814 SYBUQ9NX95 663 aa14.79□□□□□ -0.04
VRK3-212ENST00000596814 NINJ2Q9NZG7 142 aa14.79□□□□□ -0.04
VRK3-212ENST00000596814 K7EQS6 105 aa14.78□□□□□ -0.04
VRK3-212ENST00000596814 NPC1O15118 1278 aa14.78□□□□□ -0.04
VRK3-212ENST00000596814 HLA-EP13747 358 aa14.78□□□□□ -0.04
VRK3-212ENST00000596814 DRD1P21728 446 aa14.78□□□□□ -0.04
VRK3-212ENST00000596814 IL12RB1P42701 662 aa14.78□□□□□ -0.04
VRK3-212ENST00000596814 NPY2RP49146 381 aa14.78□□□□□ -0.04
VRK3-212ENST00000596814 GRSF1Q12849 480 aaKnown RBP eCLIP14.78□□□□□ -0.04
VRK3-212ENST00000596814 HNRNPA1L2Q32P51 320 aaKnown RBP14.78□□□□□ -0.04
VRK3-212ENST00000596814 SPDYCQ5MJ68 293 aa14.78□□□□□ -0.04
VRK3-212ENST00000596814 IER5LQ5T953 404 aa14.78□□□□□ -0.04
VRK3-212ENST00000596814 FSTL4Q6MZW2 842 aa14.78□□□□□ -0.04
VRK3-212ENST00000596814 CASC4Q6P4E1 433 aa14.78□□□□□ -0.04
VRK3-212ENST00000596814 TPRG1Q6ZUI0 275 aa14.78□□□□□ -0.04
VRK3-212ENST00000596814 CAMK1DQ8IU85 385 aa14.78□□□□□ -0.04
VRK3-212ENST00000596814 ZNF513Q8N8E2 541 aaPredicted RBP14.78□□□□□ -0.04
VRK3-212ENST00000596814 EZH1Q92800 747 aaPredicted RBP14.78□□□□□ -0.04
VRK3-212ENST00000596814 PTPRN2Q92932 1015 aa14.78□□□□□ -0.04
VRK3-212ENST00000596814 ADGRE3Q9BY15 652 aa14.78□□□□□ -0.04
VRK3-212ENST00000596814 CPEB1Q9BZB8 566 aaKnown RBP14.78□□□□□ -0.04
VRK3-212ENST00000596814 IL22Q9GZX6 179 aa14.78□□□□□ -0.04
VRK3-212ENST00000596814 TMEM245Q9H330 911 aa14.78□□□□□ -0.04
VRK3-212ENST00000596814 PABPC3Q9H361 631 aaKnown RBP14.78□□□□□ -0.04
VRK3-212ENST00000596814 MTG2Q9H4K7 406 aa14.78□□□□□ -0.04
VRK3-212ENST00000596814 CACNA2D2Q9NY47 1150 aa14.78□□□□□ -0.04
VRK3-212ENST00000596814 HCN2Q9UL51 889 aa14.78□□□□□ -0.04
VRK3-212ENST00000596814 MAD1L1Q9Y6D9 718 aa14.78□□□□□ -0.04
VRK3-212ENST00000596814 HTRA2O43464 458 aaPredicted RBP14.78□□□□□ -0.04
VRK3-212ENST00000596814 EGFP01133 1207 aa14.78□□□□□ -0.04
VRK3-212ENST00000596814 HNRNPLP14866 589 aaKnown RBP eCLIP14.78□□□□□ -0.04
VRK3-212ENST00000596814 TPH1P17752 444 aa14.78□□□□□ -0.04
VRK3-212ENST00000596814 PRKCHP24723 683 aa14.78□□□□□ -0.04
VRK3-212ENST00000596814 HSD17B3P37058 310 aa14.78□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 18.6 ms