RNA–Protein interactions for RNA: ENST00000596457.1

LIG1-211, Transcript of DNA ligase 1, humanhuman

TSL 5

Gene LIG1, Length 792 nt, Biotype retained intron, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG1-211ENST00000596457 CTNNA1P35221 906 aaKnown RBP11.22□□□□□ -0.61
LIG1-211ENST00000596457 CDKN2BP42772 138 aa11.22□□□□□ -0.61
LIG1-211ENST00000596457 RWDD2BP57060 319 aa11.22□□□□□ -0.61
LIG1-211ENST00000596457 PPP2CBP62714 309 aa11.22□□□□□ -0.61
LIG1-211ENST00000596457 PPP2CAP67775 309 aa11.22□□□□□ -0.61
LIG1-211ENST00000596457 IRX4P78413 519 aa11.22□□□□□ -0.61
LIG1-211ENST00000596457 TFDP2Q14188 446 aa11.22□□□□□ -0.61
LIG1-211ENST00000596457 DUOXA1Q1HG43 343 aa11.22□□□□□ -0.61
LIG1-211ENST00000596457 ZNF805Q5CZA5 627 aa11.22□□□□□ -0.61
LIG1-211ENST00000596457 PLA2G2CQ5R387 149 aa11.22□□□□□ -0.61
LIG1-211ENST00000596457 PIP5KL1Q5T9C9 394 aa11.22□□□□□ -0.61
LIG1-211ENST00000596457 CCDC181Q5TID7 509 aa11.22□□□□□ -0.61
LIG1-211ENST00000596457 SLC9A4Q6AI14 798 aa11.22□□□□□ -0.61
LIG1-211ENST00000596457 TIGD7Q6NT04 549 aaPredicted RBP11.22□□□□□ -0.61
LIG1-211ENST00000596457 NT5DC3Q86UY8 548 aa11.22□□□□□ -0.61
LIG1-211ENST00000596457 CAMK1DQ8IU85 385 aa11.22□□□□□ -0.61
LIG1-211ENST00000596457 PGBD5Q8N414 524 aa11.22□□□□□ -0.61
LIG1-211ENST00000596457 EXD1Q8NHP7 514 aa11.22□□□□□ -0.61
LIG1-211ENST00000596457 LRIG1Q96JA1 1093 aa11.22□□□□□ -0.61
LIG1-211ENST00000596457 LGMNQ99538 433 aa11.22□□□□□ -0.61
LIG1-211ENST00000596457 GTPBP2Q9BX10 602 aaKnown RBP11.22□□□□□ -0.61
LIG1-211ENST00000596457 OSBPL1AQ9BXW6 950 aa11.22□□□□□ -0.61
LIG1-211ENST00000596457 HDAC8Q9BY41 377 aa11.22□□□□□ -0.61
LIG1-211ENST00000596457 SUV39H2Q9H5I1 410 aa11.22□□□□□ -0.61
LIG1-211ENST00000596457 DTLQ9NZJ0 730 aa11.22□□□□□ -0.61
LIG1-211ENST00000596457 SAE1Q9UBE0 346 aaPredicted RBP11.22□□□□□ -0.61
LIG1-211ENST00000596457 ZBTB32Q9Y2Y4 487 aaPredicted RBP11.22□□□□□ -0.61
LIG1-211ENST00000596457 PCDHA3Q9Y5H8 950 aa11.22□□□□□ -0.61
LIG1-211ENST00000596457 DOCK9Q9BZ29 2069 aa11.21□□□□□ -0.61
LIG1-211ENST00000596457 hCG_1818297A0A087WSY0 165 aa11.21□□□□□ -0.61
LIG1-211ENST00000596457 A0A1B0GTW7 788 aa11.21□□□□□ -0.61
LIG1-211ENST00000596457 LOC105378220A0A1B0GUY1 285 aaPredicted RBP11.21□□□□□ -0.61
LIG1-211ENST00000596457 A0A1W2PQU0 124 aa11.21□□□□□ -0.61
LIG1-211ENST00000596457 CCDC66A2RUB6 948 aa11.21□□□□□ -0.61
LIG1-211ENST00000596457 MATN3O15232 486 aa11.21□□□□□ -0.61
LIG1-211ENST00000596457 BCAT2O15382 392 aaPredicted RBP11.21□□□□□ -0.61
LIG1-211ENST00000596457 SLC7A4O43246 635 aa11.21□□□□□ -0.61
LIG1-211ENST00000596457 PEX11BO96011 259 aa11.21□□□□□ -0.61
LIG1-211ENST00000596457 JCHAINP01591 159 aa11.21□□□□□ -0.61
LIG1-211ENST00000596457 PRKCGP05129 697 aa11.21□□□□□ -0.61
LIG1-211ENST00000596457 IGHV4-34P06331 123 aa11.21□□□□□ -0.61
LIG1-211ENST00000596457 C7P10643 843 aa11.21□□□□□ -0.61
LIG1-211ENST00000596457 CTNNA2P26232 953 aa11.21□□□□□ -0.61
LIG1-211ENST00000596457 CETN2P41208 172 aa11.21□□□□□ -0.61
LIG1-211ENST00000596457 CSNK1EP49674 416 aaKnown RBP11.21□□□□□ -0.61
LIG1-211ENST00000596457 TAS2R38P59533 333 aa11.21□□□□□ -0.61
LIG1-211ENST00000596457 BCL2L1Q07817 233 aa11.21□□□□□ -0.61
LIG1-211ENST00000596457 ADCY2Q08462 1091 aa11.21□□□□□ -0.61
LIG1-211ENST00000596457 ZNF211Q13398 564 aaPredicted RBP11.21□□□□□ -0.61
LIG1-211ENST00000596457 GSE1Q14687 1217 aa11.21□□□□□ -0.61
LIG1-211ENST00000596457 TFDP3Q5H9I0 405 aa11.21□□□□□ -0.61
LIG1-211ENST00000596457 AADACL2Q6P093 401 aa11.21□□□□□ -0.61
LIG1-211ENST00000596457 ADAT2Q7Z6V5 191 aaKnown RBP11.21□□□□□ -0.61
LIG1-211ENST00000596457 PRPF39Q86UA1 669 aaKnown RBP11.21□□□□□ -0.61
LIG1-211ENST00000596457 LRRC49Q8IUZ0 686 aa11.21□□□□□ -0.61
LIG1-211ENST00000596457 CCDC13Q8IYE1 715 aa11.21□□□□□ -0.61
LIG1-211ENST00000596457 UBL4BQ8N7F7 174 aa11.21□□□□□ -0.61
LIG1-211ENST00000596457 LRRC57Q8N9N7 239 aa11.21□□□□□ -0.61
LIG1-211ENST00000596457 CEP76Q8TAP6 659 aa11.21□□□□□ -0.61
LIG1-211ENST00000596457 PDCD6IPQ8WUM4 868 aaKnown RBP11.21□□□□□ -0.61
LIG1-211ENST00000596457 MYOCQ99972 504 aa11.21□□□□□ -0.61
LIG1-211ENST00000596457 CPEB1Q9BZB8 566 aaKnown RBP11.21□□□□□ -0.61
LIG1-211ENST00000596457 PCED1AQ9H1Q7 454 aa11.21□□□□□ -0.61
LIG1-211ENST00000596457 ATP13A3Q9H7F0 1226 aa11.21□□□□□ -0.61
LIG1-211ENST00000596457 EBF2Q9HAK2 575 aa11.21□□□□□ -0.61
LIG1-211ENST00000596457 AASDHPPTQ9NRN7 309 aa11.21□□□□□ -0.61
LIG1-211ENST00000596457 RXFP3Q9NSD7 469 aa11.21□□□□□ -0.61
LIG1-211ENST00000596457 RBM22Q9NW64 420 aaKnown RBP eCLIP11.21□□□□□ -0.61
LIG1-211ENST00000596457 SUSD2Q9UGT4 822 aa11.21□□□□□ -0.61
LIG1-211ENST00000596457 GGT7Q9UJ14 662 aa11.21□□□□□ -0.61
LIG1-211ENST00000596457 SLC6A14Q9UN76 642 aa11.21□□□□□ -0.61
LIG1-211ENST00000596457 ITM2BQ9Y287 266 aa11.21□□□□□ -0.61
LIG1-211ENST00000596457 SLCO1B1Q9Y6L6 691 aa11.21□□□□□ -0.61
LIG1-211ENST00000596457 CAPN6Q9Y6Q1 641 aa11.21□□□□□ -0.61
LIG1-211ENST00000596457 UNC79Q9P2D8 2635 aa11.21□□□□□ -0.62
LIG1-211ENST00000596457 TP53BP1Q12888 1972 aaPredicted RBP11.2□□□□□ -0.62
LIG1-211ENST00000596457 ZNF487B1APH4 448 aa11.2□□□□□ -0.62
LIG1-211ENST00000596457 KCNK1O00180 336 aa11.2□□□□□ -0.62
LIG1-211ENST00000596457 PPP1R12AO14974 1030 aaPredicted RBP11.2□□□□□ -0.62
LIG1-211ENST00000596457 SLC31A1O15431 190 aa11.2□□□□□ -0.62
LIG1-211ENST00000596457 PYGMP11217 842 aa11.2□□□□□ -0.62
LIG1-211ENST00000596457 CCNB1P14635 433 aa11.2□□□□□ -0.62
LIG1-211ENST00000596457 TIMP2P16035 220 aa11.2□□□□□ -0.62
LIG1-211ENST00000596457 PECAM1P16284 738 aaPredicted RBP11.2□□□□□ -0.62
LIG1-211ENST00000596457 CD27P26842 260 aa11.2□□□□□ -0.62
LIG1-211ENST00000596457 SERPINA4P29622 427 aa11.2□□□□□ -0.62
LIG1-211ENST00000596457 ABL2P42684 1182 aa11.2□□□□□ -0.62
LIG1-211ENST00000596457 MAPK8P45983 427 aa11.2□□□□□ -0.62
LIG1-211ENST00000596457 CSNK1DP48730 415 aa11.2□□□□□ -0.62
LIG1-211ENST00000596457 CCR5P51681 352 aa11.2□□□□□ -0.62
LIG1-211ENST00000596457 ATXN3P54252 364 aaPredicted RBP11.2□□□□□ -0.62
LIG1-211ENST00000596457 SEMG2Q02383 582 aa11.2□□□□□ -0.62
LIG1-211ENST00000596457 NSUN2Q08J23 767 aaKnown RBP eCLIP11.2□□□□□ -0.62
LIG1-211ENST00000596457 HNRNPDQ14103 355 aaKnown RBP11.2□□□□□ -0.62
LIG1-211ENST00000596457 GRM3Q14832 879 aa11.2□□□□□ -0.62
LIG1-211ENST00000596457 PDK1Q15118 436 aa11.2□□□□□ -0.62
LIG1-211ENST00000596457 UAP1L1Q3KQV9 507 aa11.2□□□□□ -0.62
LIG1-211ENST00000596457 SLC23A3Q6PIS1 610 aa11.2□□□□□ -0.62
LIG1-211ENST00000596457 LAYNQ6UX15 382 aa11.2□□□□□ -0.62
LIG1-211ENST00000596457 RABEPKQ7Z6M1 372 aa11.2□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms