RNA–Protein interactions for RNA: ENST00000595659.5

CCDC9-202, Transcript of coiled-coil domain containing 9, humanhuman

TSL 3

Gene CCDC9, Length 356 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC9-202ENST00000595659 ZFYVE26Q68DK2 2539 aa17.23■□□□□ 0.35
CCDC9-202ENST00000595659 NBEAQ8NFP9 2946 aa17.23■□□□□ 0.35
CCDC9-202ENST00000595659 A0A087WV48 116 aa17.23■□□□□ 0.35
CCDC9-202ENST00000595659 BRINP1O60477 761 aa17.23■□□□□ 0.35
CCDC9-202ENST00000595659 TM7SF2O76062 418 aa17.23■□□□□ 0.35
CCDC9-202ENST00000595659 PRKCGP05129 697 aa17.23■□□□□ 0.35
CCDC9-202ENST00000595659 IGFALSP35858 605 aa17.23■□□□□ 0.35
CCDC9-202ENST00000595659 C1orf61Q13536 156 aa17.23■□□□□ 0.35
CCDC9-202ENST00000595659 RTP5Q14D33 572 aa17.23■□□□□ 0.35
CCDC9-202ENST00000595659 TCEA2Q15560 299 aa17.23■□□□□ 0.35
CCDC9-202ENST00000595659 ASIC2Q16515 512 aa17.23■□□□□ 0.35
CCDC9-202ENST00000595659 CDKN3Q16667 212 aa17.23■□□□□ 0.35
CCDC9-202ENST00000595659 KLHL40Q2TBA0 621 aa17.23■□□□□ 0.35
CCDC9-202ENST00000595659 CASKIN2Q8WXE0 1202 aa17.23■□□□□ 0.35
CCDC9-202ENST00000595659 ASB12Q8WXK4 309 aa17.23■□□□□ 0.35
CCDC9-202ENST00000595659 ARHGEF26Q96DR7 871 aa17.23■□□□□ 0.35
CCDC9-202ENST00000595659 PEBP4Q96S96 227 aa17.23■□□□□ 0.35
CCDC9-202ENST00000595659 SLC39A8Q9C0K1 460 aa17.23■□□□□ 0.35
CCDC9-202ENST00000595659 NAT10Q9H0A0 1025 aaKnown RBP17.23■□□□□ 0.35
CCDC9-202ENST00000595659 ABCG4Q9H172 646 aa17.23■□□□□ 0.35
CCDC9-202ENST00000595659 HAUS4Q9H6D7 363 aa17.23■□□□□ 0.35
CCDC9-202ENST00000595659 LRRC19Q9H756 370 aa17.23■□□□□ 0.35
CCDC9-202ENST00000595659 PARVAQ9NVD7 372 aa17.23■□□□□ 0.35
CCDC9-202ENST00000595659 PNMA8BQ9ULN7 279 aaPredicted RBP17.23■□□□□ 0.35
CCDC9-202ENST00000595659 MFHAS1Q9Y4C4 1052 aa17.23■□□□□ 0.35
CCDC9-202ENST00000595659 DOCK9Q9BZ29 2069 aa17.22■□□□□ 0.35
CCDC9-202ENST00000595659 CPED1A4D0V7 1026 aa17.22■□□□□ 0.35
CCDC9-202ENST00000595659 H3BM21 787 aa17.22■□□□□ 0.35
CCDC9-202ENST00000595659 EEF2KO00418 725 aaKnown RBP17.22■□□□□ 0.35
CCDC9-202ENST00000595659 FGF10O15520 208 aaPredicted RBP17.22■□□□□ 0.35
CCDC9-202ENST00000595659 AQP9O43315 295 aa17.22■□□□□ 0.35
CCDC9-202ENST00000595659 XPAP23025 273 aaPredicted RBP17.22■□□□□ 0.35
CCDC9-202ENST00000595659 EIF2S3P41091 472 aaKnown RBP17.22■□□□□ 0.35
CCDC9-202ENST00000595659 PAPOLAP51003 745 aaKnown RBP17.22■□□□□ 0.35
CCDC9-202ENST00000595659 THOP1P52888 689 aa17.22■□□□□ 0.35
CCDC9-202ENST00000595659 AIF1P55008 147 aa17.22■□□□□ 0.35
CCDC9-202ENST00000595659 SOWAHCQ53LP3 525 aaPredicted RBP17.22■□□□□ 0.35
CCDC9-202ENST00000595659 E4F1Q66K89 784 aaPredicted RBP17.22■□□□□ 0.35
CCDC9-202ENST00000595659 CRTC1Q6UUV9 634 aa17.22■□□□□ 0.35
CCDC9-202ENST00000595659 ZNF571Q7Z3V5 609 aaPredicted RBP17.22■□□□□ 0.35
CCDC9-202ENST00000595659 ZSCAN30Q86W11 494 aa17.22■□□□□ 0.35
CCDC9-202ENST00000595659 DENND6BQ8NEG7 585 aa17.22■□□□□ 0.35
CCDC9-202ENST00000595659 IFI44Q8TCB0 444 aa17.22■□□□□ 0.35
CCDC9-202ENST00000595659 NAP1L5Q96NT1 182 aaPredicted RBP17.22■□□□□ 0.35
CCDC9-202ENST00000595659 KCTD15Q96SI1 283 aaPredicted RBP17.22■□□□□ 0.35
CCDC9-202ENST00000595659 DUSP23Q9BVJ7 150 aa17.22■□□□□ 0.35
CCDC9-202ENST00000595659 PDFQ9HBH1 243 aa17.22■□□□□ 0.35
CCDC9-202ENST00000595659 TP53BP1Q12888 1972 aaPredicted RBP17.22■□□□□ 0.35
CCDC9-202ENST00000595659 FAM208BQ5VWN6 2430 aa17.21■□□□□ 0.35
CCDC9-202ENST00000595659 DAPK3O43293 454 aa17.21■□□□□ 0.35
CCDC9-202ENST00000595659 BUB1BO60566 1050 aaPredicted RBP17.21■□□□□ 0.35
CCDC9-202ENST00000595659 GCATO75600 419 aa17.21■□□□□ 0.35
CCDC9-202ENST00000595659 FTLP02792 175 aaPredicted RBP17.21■□□□□ 0.35
CCDC9-202ENST00000595659 SKILP12757 684 aa17.21■□□□□ 0.35
CCDC9-202ENST00000595659 DESP17661 470 aa17.21■□□□□ 0.35
CCDC9-202ENST00000595659 EIF4A3P38919 411 aaKnown RBP17.21■□□□□ 0.35
CCDC9-202ENST00000595659 ABCG1P45844 678 aa17.21■□□□□ 0.35
CCDC9-202ENST00000595659 RGRP47804 291 aa17.21■□□□□ 0.35
CCDC9-202ENST00000595659 DUSP3P51452 185 aaPredicted RBP17.21■□□□□ 0.35
CCDC9-202ENST00000595659 ADKP55263 362 aaKnown RBP17.21■□□□□ 0.35
CCDC9-202ENST00000595659 PRRT3Q5FWE3 981 aa17.21■□□□□ 0.35
CCDC9-202ENST00000595659 ERMARDQ5T6L9 678 aa17.21■□□□□ 0.35
CCDC9-202ENST00000595659 FAXCQ5TGI0 409 aa17.21■□□□□ 0.35
CCDC9-202ENST00000595659 PLEKHA7Q6IQ23 1121 aa17.21■□□□□ 0.35
CCDC9-202ENST00000595659 GUSBP11Q6P575 273 aa17.21■□□□□ 0.35
CCDC9-202ENST00000595659 ARHGAP36Q6ZRI8 547 aa17.21■□□□□ 0.35
CCDC9-202ENST00000595659 NYAP1Q6ZVC0 841 aa17.21■□□□□ 0.35
CCDC9-202ENST00000595659 CAMK1DQ8IU85 385 aa17.21■□□□□ 0.35
CCDC9-202ENST00000595659 FAM181AQ8N9Y4 354 aa17.21■□□□□ 0.35
CCDC9-202ENST00000595659 TP53I13Q8NBR0 393 aaPredicted RBP17.21■□□□□ 0.35
CCDC9-202ENST00000595659 MAPK15Q8TD08 544 aa17.21■□□□□ 0.35
CCDC9-202ENST00000595659 VCPIP1Q96JH7 1222 aa17.21■□□□□ 0.35
CCDC9-202ENST00000595659 SNRNP25Q9BV90 132 aaKnown RBP17.21■□□□□ 0.35
CCDC9-202ENST00000595659 SUV39H2Q9H5I1 410 aa17.21■□□□□ 0.35
CCDC9-202ENST00000595659 PCDH12Q9NPG4 1184 aa17.21■□□□□ 0.35
CCDC9-202ENST00000595659 MYO1AQ9UBC5 1043 aa17.21■□□□□ 0.35
CCDC9-202ENST00000595659 DKK3Q9UBP4 350 aa17.21■□□□□ 0.35
CCDC9-202ENST00000595659 APOBEC3BQ9UH17 382 aaKnown RBP17.21■□□□□ 0.35
CCDC9-202ENST00000595659 GOLGA4Q13439 2230 aaKnown RBP17.21■□□□□ 0.35
CCDC9-202ENST00000595659 ITPR1Q14643 2758 aa17.21■□□□□ 0.35
CCDC9-202ENST00000595659 ANKRD11Q6UB99 2663 aaPredicted RBP17.21■□□□□ 0.35
CCDC9-202ENST00000595659 TMEM191CA6NGB0 347 aa17.2■□□□□ 0.34
CCDC9-202ENST00000595659 SMTNL1A8MU46 457 aa17.2■□□□□ 0.34
CCDC9-202ENST00000595659 DFFAO00273 331 aa17.2■□□□□ 0.34
CCDC9-202ENST00000595659 DDX3XO00571 662 aaKnown RBP eCLIP17.2■□□□□ 0.341e-9■□□□□ 9.8
CCDC9-202ENST00000595659 CASC3O15234 703 aaKnown RBP17.2■□□□□ 0.34
CCDC9-202ENST00000595659 PRAMEF11O60813 436 aa17.2■□□□□ 0.34
CCDC9-202ENST00000595659 MPOP05164 745 aa17.2■□□□□ 0.34
CCDC9-202ENST00000595659 CELA2BP08218 269 aaPredicted RBP17.2■□□□□ 0.34
CCDC9-202ENST00000595659 MIPP30301 263 aa17.2■□□□□ 0.34
CCDC9-202ENST00000595659 NDST2P52849 883 aa17.2■□□□□ 0.34
CCDC9-202ENST00000595659 PTK2BQ14289 1009 aa17.2■□□□□ 0.34
CCDC9-202ENST00000595659 IRF4Q15306 451 aa17.2■□□□□ 0.34
CCDC9-202ENST00000595659 TMEM52BQ4KMG9 183 aa17.2■□□□□ 0.34
CCDC9-202ENST00000595659 FILIP1LQ4L180 1135 aa17.2■□□□□ 0.34
CCDC9-202ENST00000595659 PPP6R3Q5H9R7 873 aaPredicted RBP17.2■□□□□ 0.34
CCDC9-202ENST00000595659 CFAP58Q5T655 872 aa17.2■□□□□ 0.34
CCDC9-202ENST00000595659 CDCP2Q5VXM1 449 aa17.2■□□□□ 0.34
CCDC9-202ENST00000595659 CAVIN1Q6NZI2 390 aaKnown RBP17.2■□□□□ 0.34
CCDC9-202ENST00000595659 ZCCHC8Q6NZY4 707 aaKnown RBP17.2■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 70.3 ms