RNA–Protein interactions for RNA: ENST00000589537.1

NFIC-208, Transcript of nuclear factor I C, humanhuman

TSL 2

Gene NFIC, Length 977 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NFIC-208ENST00000589537 C1QTNF9P0C862 333 aa16.81■□□□□ 0.28
NFIC-208ENST00000589537 SERPINB6P35237 376 aa16.81■□□□□ 0.28
NFIC-208ENST00000589537 RENBPP51606 427 aa16.81■□□□□ 0.28
NFIC-208ENST00000589537 IL10RBQ08334 325 aa16.81■□□□□ 0.28
NFIC-208ENST00000589537 HADHQ16836 314 aaKnown RBP16.81■□□□□ 0.28
NFIC-208ENST00000589537 TSR1Q2NL82 804 aaKnown RBP16.81■□□□□ 0.28
NFIC-208ENST00000589537 TMPRSS7Q7RTY8 843 aa16.81■□□□□ 0.28
NFIC-208ENST00000589537 PTAR1Q7Z6K3 402 aaPredicted RBP16.81■□□□□ 0.28
NFIC-208ENST00000589537 ARHGAP12Q8IWW6 846 aa16.81■□□□□ 0.28
NFIC-208ENST00000589537 CXorf40AQ8TE69 158 aa16.81■□□□□ 0.28
NFIC-208ENST00000589537 VOPP1Q96AW1 172 aa16.81■□□□□ 0.28
NFIC-208ENST00000589537 CNDP2Q96KP4 475 aaKnown RBP16.81■□□□□ 0.28
NFIC-208ENST00000589537 CINPQ9BW66 212 aaPredicted RBP16.81■□□□□ 0.28
NFIC-208ENST00000589537 ATP13A3Q9H7F0 1226 aa16.81■□□□□ 0.28
NFIC-208ENST00000589537 GPR27Q9NS67 375 aa16.81■□□□□ 0.28
NFIC-208ENST00000589537 ZNHIT6Q9NWK9 470 aaKnown RBP16.81■□□□□ 0.28
NFIC-208ENST00000589537 RCOR3Q9P2K3 495 aaPredicted RBP16.81■□□□□ 0.28
NFIC-208ENST00000589537 UVRAGQ9P2Y5 699 aa16.81■□□□□ 0.28
NFIC-208ENST00000589537 CA5BQ9Y2D0 317 aa16.81■□□□□ 0.28
NFIC-208ENST00000589537 TSPAN11A1L157 253 aa16.8■□□□□ 0.28
NFIC-208ENST00000589537 IGLON5A6NGN9 336 aa16.8■□□□□ 0.28
NFIC-208ENST00000589537 IL1R2P27930 398 aa16.8■□□□□ 0.28
NFIC-208ENST00000589537 SERPINA4P29622 427 aa16.8■□□□□ 0.28
NFIC-208ENST00000589537 HSPA9P38646 679 aaKnown RBP16.8■□□□□ 0.28
NFIC-208ENST00000589537 NSUN2Q08J23 767 aaKnown RBP eCLIP16.8■□□□□ 0.28
NFIC-208ENST00000589537 ILKQ13418 452 aa16.8■□□□□ 0.28
NFIC-208ENST00000589537 ERAP2Q6P179 960 aa16.8■□□□□ 0.28
NFIC-208ENST00000589537 TMCO3Q6UWJ1 677 aa16.8■□□□□ 0.28
NFIC-208ENST00000589537 Q6ZSR6 202 aa16.8■□□□□ 0.28
NFIC-208ENST00000589537 KANSL1Q7Z3B3 1105 aa16.8■□□□□ 0.28
NFIC-208ENST00000589537 EID2Q8N6I1 236 aa16.8■□□□□ 0.28
NFIC-208ENST00000589537 OR8K1Q8NGG5 319 aa16.8■□□□□ 0.28
NFIC-208ENST00000589537 CTNNBL1Q8WYA6 563 aaPredicted RBP16.8■□□□□ 0.28
NFIC-208ENST00000589537 BMFQ96LC9 184 aa16.8■□□□□ 0.28
NFIC-208ENST00000589537 DNAJC7Q99615 494 aa16.8■□□□□ 0.28
NFIC-208ENST00000589537 SUV39H2Q9H5I1 410 aa16.8■□□□□ 0.28
NFIC-208ENST00000589537 SEPT3Q9UH03 358 aa16.8■□□□□ 0.28
NFIC-208ENST00000589537 IPO11Q9UI26 975 aaKnown RBP16.8■□□□□ 0.28
NFIC-208ENST00000589537 MAP1BP46821 2468 aaKnown RBP16.8■□□□□ 0.28
NFIC-208ENST00000589537 SSU72P8A0A1W2PR75 194 aa16.79■□□□□ 0.28
NFIC-208ENST00000589537 H3BM21 787 aa16.79■□□□□ 0.28
NFIC-208ENST00000589537 RIOK3O14730 519 aaKnown RBP16.79■□□□□ 0.28
NFIC-208ENST00000589537 SPINT1O43278 529 aa16.79■□□□□ 0.28
NFIC-208ENST00000589537 TM7SF2O76062 418 aa16.79■□□□□ 0.28
NFIC-208ENST00000589537 RARAP10276 462 aa16.79■□□□□ 0.28
NFIC-208ENST00000589537 ALPPL2P10696 532 aa16.79■□□□□ 0.28
NFIC-208ENST00000589537 CLDN2P57739 230 aa16.79■□□□□ 0.28
NFIC-208ENST00000589537 HNRNPKP61978 463 aaKnown RBP eCLIP16.79■□□□□ 0.287e-9■■■■■ 31.7
NFIC-208ENST00000589537 SLC25A11Q02978 314 aaKnown RBP16.79■□□□□ 0.28
NFIC-208ENST00000589537 BNIP3Q12983 259 aa16.79■□□□□ 0.28
NFIC-208ENST00000589537 FGL2Q14314 439 aa16.79■□□□□ 0.28
NFIC-208ENST00000589537 SLC18A3Q16572 532 aa16.79■□□□□ 0.28
NFIC-208ENST00000589537 SMTNL2Q2TAL5 461 aa16.79■□□□□ 0.28
NFIC-208ENST00000589537 CCNI2Q6ZMN8 369 aaPredicted RBP16.79■□□□□ 0.28
NFIC-208ENST00000589537 POLNQ7Z5Q5 900 aa16.79■□□□□ 0.28
NFIC-208ENST00000589537 PARGQ86W56 976 aa16.79■□□□□ 0.28
NFIC-208ENST00000589537 LRRC49Q8IUZ0 686 aa16.79■□□□□ 0.28
NFIC-208ENST00000589537 BBS5Q8N3I7 341 aa16.79■□□□□ 0.28
NFIC-208ENST00000589537 NPWQ8N729 165 aa16.79■□□□□ 0.28
NFIC-208ENST00000589537 ZNF564Q8TBZ8 553 aaPredicted RBP16.79■□□□□ 0.28
NFIC-208ENST00000589537 HSPH1Q92598 858 aa16.79■□□□□ 0.28
NFIC-208ENST00000589537 EXOC2Q96KP1 924 aa16.79■□□□□ 0.28
NFIC-208ENST00000589537 CSPG4P5Q96PW8 444 aa16.79■□□□□ 0.28
NFIC-208ENST00000589537 KLF6Q99612 283 aaPredicted RBP16.79■□□□□ 0.28
NFIC-208ENST00000589537 DEF6Q9H4E7 631 aa16.79■□□□□ 0.28
NFIC-208ENST00000589537 NENFQ9UMX5 172 aa16.79■□□□□ 0.28
NFIC-208ENST00000589537 ITM2BQ9Y287 266 aa16.79■□□□□ 0.28
NFIC-208ENST00000589537 KMT2BQ9UMN6 2715 aaPredicted RBP16.78■□□□□ 0.28
NFIC-208ENST00000589537 SPTY2D1-AS1A0A0U1RR47 76 aa16.78■□□□□ 0.28
NFIC-208ENST00000589537 POM121BA6NF01 834 aa16.78■□□□□ 0.28
NFIC-208ENST00000589537 NEMP2A6NFY4 417 aa16.78■□□□□ 0.28
NFIC-208ENST00000589537 GOLGA8CPA6NN73 597 aa16.78■□□□□ 0.28
NFIC-208ENST00000589537 RFPL3O75679 317 aa16.78■□□□□ 0.28
NFIC-208ENST00000589537 H2AFZP0C0S5 128 aa16.78■□□□□ 0.28
NFIC-208ENST00000589537 TIMP2P16035 220 aa16.78■□□□□ 0.28
NFIC-208ENST00000589537 EIF4A3P38919 411 aaKnown RBP16.78■□□□□ 0.28
NFIC-208ENST00000589537 AP1S1P61966 158 aa16.78■□□□□ 0.28
NFIC-208ENST00000589537 YPEL5P62699 121 aa16.78■□□□□ 0.28
NFIC-208ENST00000589537 POLR2LP62875 67 aaKnown RBP16.78■□□□□ 0.28
NFIC-208ENST00000589537 ZNF211Q13398 564 aaPredicted RBP16.78■□□□□ 0.28
NFIC-208ENST00000589537 PTK2BQ14289 1009 aa16.78■□□□□ 0.28
NFIC-208ENST00000589537 KRT81Q14533 505 aa16.78■□□□□ 0.28
NFIC-208ENST00000589537 SMAD1Q15797 465 aaKnown RBP16.78■□□□□ 0.28
NFIC-208ENST00000589537 UGP2Q16851 508 aa16.78■□□□□ 0.28
NFIC-208ENST00000589537 TMEM52BQ4KMG9 183 aa16.78■□□□□ 0.28
NFIC-208ENST00000589537 H2AFVQ71UI9 128 aa16.78■□□□□ 0.28
NFIC-208ENST00000589537 SRLQ86TD4 932 aa16.78■□□□□ 0.28
NFIC-208ENST00000589537 TMPRSS12Q86WS5 348 aa16.78■□□□□ 0.28
NFIC-208ENST00000589537 SLC22A18ASQ8N1D0 253 aa16.78■□□□□ 0.28
NFIC-208ENST00000589537 OR4C6Q8NH72 309 aa16.78■□□□□ 0.28
NFIC-208ENST00000589537 NSMCE1Q8WV22 266 aa16.78■□□□□ 0.28
NFIC-208ENST00000589537 TSC1Q92574 1164 aa16.78■□□□□ 0.28
NFIC-208ENST00000589537 PSKH2Q96QS6 385 aa16.78■□□□□ 0.28
NFIC-208ENST00000589537 DUSP23Q9BVJ7 150 aa16.78■□□□□ 0.28
NFIC-208ENST00000589537 PCDH18Q9HCL0 1135 aa16.78■□□□□ 0.28
NFIC-208ENST00000589537 EVA1BQ9NVM1 165 aa16.78■□□□□ 0.28
NFIC-208ENST00000589537 USP24Q9UPU5 2620 aa16.77■□□□□ 0.28
NFIC-208ENST00000589537 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP16.77■□□□□ 0.28
NFIC-208ENST00000589537 A0A1W2PQ67 120 aa16.77■□□□□ 0.28
NFIC-208ENST00000589537 CFAP69A5D8W1 941 aa16.77■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms