RNA–Protein interactions for RNA: ENST00000588712.5

NEDD4L-224, Transcript of neural precursor cell expressed, developmentally down-regulated 4-like, E3 ubiquitin protein ligase, humanhuman

TSL 2

Gene NEDD4L, Length 2,066 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD4L-224ENST00000588712 PAMP19021 973 aa10.68□□□□□ -0.7
NEDD4L-224ENST00000588712 NFKBIAP25963 317 aa10.68□□□□□ -0.7
NEDD4L-224ENST00000588712 MGAT1P26572 445 aa10.68□□□□□ -0.7
NEDD4L-224ENST00000588712 SERPINA4P29622 427 aa10.68□□□□□ -0.7
NEDD4L-224ENST00000588712 GRIA2P42262 883 aa10.68□□□□□ -0.7
NEDD4L-224ENST00000588712 PDE1BQ01064 536 aa10.68□□□□□ -0.7
NEDD4L-224ENST00000588712 BCL2L1Q07817 233 aa10.68□□□□□ -0.7
NEDD4L-224ENST00000588712 GEN1Q17RS7 908 aa10.68□□□□□ -0.7
NEDD4L-224ENST00000588712 LEXMQ3ZCV2 418 aa10.68□□□□□ -0.7
NEDD4L-224ENST00000588712 CARD16Q5EG05 197 aa10.68□□□□□ -0.7
NEDD4L-224ENST00000588712 SPANXN3Q5MJ09 141 aa10.68□□□□□ -0.7
NEDD4L-224ENST00000588712 C22orf39Q6P5X5 142 aa10.68□□□□□ -0.7
NEDD4L-224ENST00000588712 GSDMBQ8TAX9 411 aa10.68□□□□□ -0.7
NEDD4L-224ENST00000588712 SPOCK2Q92563 424 aa10.68□□□□□ -0.7
NEDD4L-224ENST00000588712 CDKL2Q92772 493 aa10.68□□□□□ -0.7
NEDD4L-224ENST00000588712 ZNF641Q96N77 438 aaPredicted RBP10.68□□□□□ -0.7
NEDD4L-224ENST00000588712 TDRD1Q9BXT4 1180 aaKnown RBP10.68□□□□□ -0.7
NEDD4L-224ENST00000588712 CIPCQ9C0C6 399 aa10.68□□□□□ -0.7
NEDD4L-224ENST00000588712 EPB41L4BQ9H329 900 aa10.68□□□□□ -0.7
NEDD4L-224ENST00000588712 DYNC1LI1Q9Y6G9 523 aaKnown RBP10.68□□□□□ -0.7
NEDD4L-224ENST00000588712 MYOFQ9NZM1 2061 aa10.68□□□□□ -0.7
NEDD4L-224ENST00000588712 TBC1D3BA6NDS4 549 aa10.67□□□□□ -0.7
NEDD4L-224ENST00000588712 GRXCR2A6NFK2 248 aa10.67□□□□□ -0.7
NEDD4L-224ENST00000588712 USP12O75317 370 aa10.67□□□□□ -0.7
NEDD4L-224ENST00000588712 USP1O94782 785 aa10.67□□□□□ -0.7
NEDD4L-224ENST00000588712 APODP05090 189 aa10.67□□□□□ -0.7
NEDD4L-224ENST00000588712 GLULP15104 373 aa10.67□□□□□ -0.7
NEDD4L-224ENST00000588712 ATP5DP30049 168 aa10.67□□□□□ -0.7
NEDD4L-224ENST00000588712 FASTKD3Q14CZ7 662 aaKnown RBP10.67□□□□□ -0.7
NEDD4L-224ENST00000588712 DLG2Q15700 870 aa10.67□□□□□ -0.7
NEDD4L-224ENST00000588712 CCDC85BQ15834 202 aaPredicted RBP10.67□□□□□ -0.7
NEDD4L-224ENST00000588712 MYLK3Q32MK0 819 aa10.67□□□□□ -0.7
NEDD4L-224ENST00000588712 HP1BP3Q5SSJ5 553 aaPredicted RBP10.67□□□□□ -0.7
NEDD4L-224ENST00000588712 CEP85LQ5SZL2 805 aa10.67□□□□□ -0.7
NEDD4L-224ENST00000588712 ARMC12Q5T9G4 340 aa10.67□□□□□ -0.7
NEDD4L-224ENST00000588712 DENND5AQ6IQ26 1287 aa10.67□□□□□ -0.7
NEDD4L-224ENST00000588712 TMEM135Q86UB9 458 aa10.67□□□□□ -0.7
NEDD4L-224ENST00000588712 RIBC1Q8N443 379 aaPredicted RBP10.67□□□□□ -0.7
NEDD4L-224ENST00000588712 DEFB123Q8N688 67 aa10.67□□□□□ -0.7
NEDD4L-224ENST00000588712 TERB1Q8NA31 727 aa10.67□□□□□ -0.7
NEDD4L-224ENST00000588712 DNASE1L2Q92874 299 aa10.67□□□□□ -0.7
NEDD4L-224ENST00000588712 MSANTD3Q96H12 275 aa10.67□□□□□ -0.7
NEDD4L-224ENST00000588712 RPL10LQ96L21 214 aaKnown RBP10.67□□□□□ -0.7
NEDD4L-224ENST00000588712 KIFC1Q9BW19 673 aa10.67□□□□□ -0.7
NEDD4L-224ENST00000588712 GTSE1Q9NYZ3 720 aa10.67□□□□□ -0.7
NEDD4L-224ENST00000588712 HACD3Q9P035 362 aa10.67□□□□□ -0.7
NEDD4L-224ENST00000588712 SLC24A2Q9UI40 661 aa10.67□□□□□ -0.7
NEDD4L-224ENST00000588712 SOX13Q9UN79 622 aa10.67□□□□□ -0.7
NEDD4L-224ENST00000588712 RAI2Q9Y5P3 530 aa10.67□□□□□ -0.7
NEDD4L-224ENST00000588712 NFS1Q9Y697 457 aa10.67□□□□□ -0.7
NEDD4L-224ENST00000588712 IKBKGQ9Y6K9 419 aa10.67□□□□□ -0.7
NEDD4L-224ENST00000588712 GOLGA8KD6RF30 607 aa10.67□□□□□ -0.7
NEDD4L-224ENST00000588712 K7ERQ8 282 aa10.67□□□□□ -0.7
NEDD4L-224ENST00000588712 ARNTLO00327 626 aa10.67□□□□□ -0.7
NEDD4L-224ENST00000588712 RASGRF2O14827 1237 aa10.67□□□□□ -0.7
NEDD4L-224ENST00000588712 PAPSS2O95340 614 aaPredicted RBP10.67□□□□□ -0.7
NEDD4L-224ENST00000588712 CRTAMO95727 393 aa10.67□□□□□ -0.7
NEDD4L-224ENST00000588712 GRIA4P48058 902 aa10.67□□□□□ -0.7
NEDD4L-224ENST00000588712 POLR2LP62875 67 aaKnown RBP10.67□□□□□ -0.7
NEDD4L-224ENST00000588712 FAM193AP78312 1265 aa10.67□□□□□ -0.7
NEDD4L-224ENST00000588712 PFKPQ01813 784 aa10.67□□□□□ -0.7
NEDD4L-224ENST00000588712 NAB1Q13506 487 aa10.67□□□□□ -0.7
NEDD4L-224ENST00000588712 RASA2Q15283 850 aa10.67□□□□□ -0.7
NEDD4L-224ENST00000588712 SMAD2Q15796 467 aaKnown RBP10.67□□□□□ -0.7
NEDD4L-224ENST00000588712 GAB4Q2WGN9 574 aa10.67□□□□□ -0.7
NEDD4L-224ENST00000588712 LGSNQ5TDP6 509 aa10.67□□□□□ -0.7
NEDD4L-224ENST00000588712 STEAP4Q687X5 459 aa10.67□□□□□ -0.7
NEDD4L-224ENST00000588712 PKN3Q6P5Z2 889 aa10.67□□□□□ -0.7
NEDD4L-224ENST00000588712 RYBPQ8N488 228 aaPredicted RBP10.67□□□□□ -0.7
NEDD4L-224ENST00000588712 BRSK1Q8TDC3 778 aa10.67□□□□□ -0.7
NEDD4L-224ENST00000588712 KCNV2Q8TDN2 545 aa10.67□□□□□ -0.7
NEDD4L-224ENST00000588712 HCAR2Q8TDS4 363 aa10.67□□□□□ -0.7
NEDD4L-224ENST00000588712 RMDN1Q96DB5 314 aa10.67□□□□□ -0.7
NEDD4L-224ENST00000588712 APOL2Q9BQE5 337 aa10.67□□□□□ -0.7
NEDD4L-224ENST00000588712 TRABDQ9H4I3 376 aa10.67□□□□□ -0.7
NEDD4L-224ENST00000588712 ACSS3Q9H6R3 686 aa10.67□□□□□ -0.7
NEDD4L-224ENST00000588712 C8orf33Q9H7E9 229 aaPredicted RBP10.67□□□□□ -0.7
NEDD4L-224ENST00000588712 YY1AP1Q9H869 796 aa10.67□□□□□ -0.7
NEDD4L-224ENST00000588712 SYBUQ9NX95 663 aa10.67□□□□□ -0.7
NEDD4L-224ENST00000588712 HECAQ9UBI9 543 aaPredicted RBP10.67□□□□□ -0.7
NEDD4L-224ENST00000588712 PRKAG3Q9UGI9 489 aa10.67□□□□□ -0.7
NEDD4L-224ENST00000588712 RIMKLBQ9ULI2 386 aa10.67□□□□□ -0.7
NEDD4L-224ENST00000588712 ACTL7AQ9Y615 435 aa10.67□□□□□ -0.7
NEDD4L-224ENST00000588712 FAM169AQ9Y6X4 670 aa10.67□□□□□ -0.7
NEDD4L-224ENST00000588712 LAMA3Q16787 3333 aa10.66□□□□□ -0.7
NEDD4L-224ENST00000588712 EXOC1LA0A1B0GW35 172 aa10.66□□□□□ -0.7
NEDD4L-224ENST00000588712 OTOL1A6NHN0 477 aaPredicted RBP10.66□□□□□ -0.7
NEDD4L-224ENST00000588712 ANKRD66B4E2M5 251 aa10.66□□□□□ -0.7
NEDD4L-224ENST00000588712 WASH3PC4AMC7 463 aa10.66□□□□□ -0.7
NEDD4L-224ENST00000588712 SMAD6O43541 496 aaKnown RBP10.66□□□□□ -0.7
NEDD4L-224ENST00000588712 CDH16O75309 829 aa10.66□□□□□ -0.7
NEDD4L-224ENST00000588712 ALDH1A2O94788 518 aa10.66□□□□□ -0.7
NEDD4L-224ENST00000588712 SSTR1P30872 391 aa10.66□□□□□ -0.7
NEDD4L-224ENST00000588712 CTSOP43234 321 aaPredicted RBP10.66□□□□□ -0.7
NEDD4L-224ENST00000588712 TNFRSF4P43489 277 aa10.66□□□□□ -0.7
NEDD4L-224ENST00000588712 RGRP47804 291 aa10.66□□□□□ -0.7
NEDD4L-224ENST00000588712 SLC6A11P48066 632 aa10.66□□□□□ -0.7
NEDD4L-224ENST00000588712 EPHB1P54762 984 aa10.66□□□□□ -0.7
NEDD4L-224ENST00000588712 GPX6P59796 221 aa10.66□□□□□ -0.7
NEDD4L-224ENST00000588712 ZNF844Q08AG5 666 aa10.66□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms