RNA–Protein interactions for RNA: ENST00000588483.1

TPM4-209, Transcript of tropomyosin 4, humanhuman

TSL 5

Gene TPM4, Length 801 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM4-209ENST00000588483 PDK2Q15119 407 aa10.62□□□□□ -0.71
TPM4-209ENST00000588483 SHBQ15464 509 aa10.62□□□□□ -0.71
TPM4-209ENST00000588483 SEL1L3Q68CR1 1132 aa10.62□□□□□ -0.71
TPM4-209ENST00000588483 BRAT1Q6PJG6 821 aa10.62□□□□□ -0.71
TPM4-209ENST00000588483 ARHGAP36Q6ZRI8 547 aa10.62□□□□□ -0.71
TPM4-209ENST00000588483 SPATS2Q86XZ4 545 aaKnown RBP10.62□□□□□ -0.71
TPM4-209ENST00000588483 TP53INP2Q8IXH6 220 aa10.62□□□□□ -0.71
TPM4-209ENST00000588483 RYBPQ8N488 228 aaPredicted RBP10.62□□□□□ -0.71
TPM4-209ENST00000588483 TSEN2Q8NCE0 465 aaKnown RBP10.62□□□□□ -0.71
TPM4-209ENST00000588483 DENND6BQ8NEG7 585 aa10.62□□□□□ -0.71
TPM4-209ENST00000588483 SLC35G2Q8TBE7 412 aa10.62□□□□□ -0.71
TPM4-209ENST00000588483 SAP25Q8TEE9 199 aa10.62□□□□□ -0.71
TPM4-209ENST00000588483 RFFLQ8WZ73 363 aa10.62□□□□□ -0.71
TPM4-209ENST00000588483 FATE1Q969F0 183 aa10.62□□□□□ -0.71
TPM4-209ENST00000588483 ECHDC3Q96DC8 303 aa10.62□□□□□ -0.71
TPM4-209ENST00000588483 IFT43Q96FT9 208 aa10.62□□□□□ -0.71
TPM4-209ENST00000588483 KLHL32Q96NJ5 620 aa10.62□□□□□ -0.71
TPM4-209ENST00000588483 SLC17A9Q9BYT1 436 aa10.62□□□□□ -0.71
TPM4-209ENST00000588483 SP110Q9HB58 689 aa10.62□□□□□ -0.71
TPM4-209ENST00000588483 FAM221BA6H8Z2 402 aa10.61□□□□□ -0.71
TPM4-209ENST00000588483 DFFAO00273 331 aa10.61□□□□□ -0.71
TPM4-209ENST00000588483 TRAFD1O14545 582 aaPredicted RBP10.61□□□□□ -0.71
TPM4-209ENST00000588483 MUSKO15146 869 aa10.61□□□□□ -0.71
TPM4-209ENST00000588483 INSIG1O15503 277 aa10.61□□□□□ -0.71
TPM4-209ENST00000588483 BUB1BO60566 1050 aaPredicted RBP10.61□□□□□ -0.71
TPM4-209ENST00000588483 PCDH8O95206 1070 aa10.61□□□□□ -0.71
TPM4-209ENST00000588483 TRIM16O95361 564 aa10.61□□□□□ -0.71
TPM4-209ENST00000588483 CD48P09326 243 aa10.61□□□□□ -0.71
TPM4-209ENST00000588483 TIMP2P16035 220 aa10.61□□□□□ -0.71
TPM4-209ENST00000588483 CR2P20023 1033 aa10.61□□□□□ -0.71
TPM4-209ENST00000588483 EPHA8P29322 1005 aaPredicted RBP10.61□□□□□ -0.71
TPM4-209ENST00000588483 RGRP47804 291 aa10.61□□□□□ -0.71
TPM4-209ENST00000588483 ARRB1P49407 418 aaPredicted RBP10.61□□□□□ -0.71
TPM4-209ENST00000588483 RENBPP51606 427 aa10.61□□□□□ -0.71
TPM4-209ENST00000588483 ZNF75DP51815 510 aa10.61□□□□□ -0.71
TPM4-209ENST00000588483 TAS2R40P59535 323 aa10.61□□□□□ -0.71
TPM4-209ENST00000588483 AP1S1P61966 158 aa10.61□□□□□ -0.71
TPM4-209ENST00000588483 FAM193AP78312 1265 aa10.61□□□□□ -0.71
TPM4-209ENST00000588483 SIM1P81133 766 aaPredicted RBP10.61□□□□□ -0.71
TPM4-209ENST00000588483 ELP6Q0PNE2 266 aa10.61□□□□□ -0.71
TPM4-209ENST00000588483 PAFAH1B3Q15102 231 aaKnown RBP10.61□□□□□ -0.71
TPM4-209ENST00000588483 AGERQ15109 404 aa10.61□□□□□ -0.71
TPM4-209ENST00000588483 TRIP6Q15654 476 aaKnown RBP10.61□□□□□ -0.71
TPM4-209ENST00000588483 INAVAQ3KP66 663 aa10.61□□□□□ -0.71
TPM4-209ENST00000588483 TMEM52BQ4KMG9 183 aa10.61□□□□□ -0.71
TPM4-209ENST00000588483 RALGPS1Q5JS13 557 aa10.61□□□□□ -0.71
TPM4-209ENST00000588483 LRRC38Q5VT99 294 aa10.61□□□□□ -0.71
TPM4-209ENST00000588483 KYAT3Q6YP21 454 aaKnown RBP10.61□□□□□ -0.71
TPM4-209ENST00000588483 GCNT7Q6ZNI0 430 aa10.61□□□□□ -0.71
TPM4-209ENST00000588483 KANSL1Q7Z3B3 1105 aa10.61□□□□□ -0.71
TPM4-209ENST00000588483 SRLQ86TD4 932 aa10.61□□□□□ -0.71
TPM4-209ENST00000588483 CPNE8Q86YQ8 564 aa10.61□□□□□ -0.71
TPM4-209ENST00000588483 DCP2Q8IU60 420 aaKnown RBP10.61□□□□□ -0.71
TPM4-209ENST00000588483 MAP7D3Q8IWC1 876 aa10.61□□□□□ -0.71
TPM4-209ENST00000588483 CCDC170Q8IYT3 715 aa10.61□□□□□ -0.71
TPM4-209ENST00000588483 EXOC2Q96KP1 924 aa10.61□□□□□ -0.71
TPM4-209ENST00000588483 KLF6Q99612 283 aaPredicted RBP10.61□□□□□ -0.71
TPM4-209ENST00000588483 CDC6Q99741 560 aa10.61□□□□□ -0.71
TPM4-209ENST00000588483 MGME1Q9BQP7 344 aa10.61□□□□□ -0.71
TPM4-209ENST00000588483 CINPQ9BW66 212 aaPredicted RBP10.61□□□□□ -0.71
TPM4-209ENST00000588483 RBSNQ9H1K0 784 aa10.61□□□□□ -0.71
TPM4-209ENST00000588483 SUV39H2Q9H5I1 410 aa10.61□□□□□ -0.71
TPM4-209ENST00000588483 SPTLC3Q9NUV7 552 aa10.61□□□□□ -0.71
TPM4-209ENST00000588483 SEPT3Q9UH03 358 aa10.61□□□□□ -0.71
TPM4-209ENST00000588483 ANGPTL2Q9UKU9 493 aa10.61□□□□□ -0.71
TPM4-209ENST00000588483 LRRK1Q38SD2 2015 aa10.61□□□□□ -0.71
TPM4-209ENST00000588483 FREM2Q5SZK8 3169 aa10.6□□□□□ -0.71
TPM4-209ENST00000588483 SHROOM3Q8TF72 1996 aa10.6□□□□□ -0.71
TPM4-209ENST00000588483 CFAP69A5D8W1 941 aa10.6□□□□□ -0.71
TPM4-209ENST00000588483 A6NNZ2 444 aa10.6□□□□□ -0.71
TPM4-209ENST00000588483 TOR1BO14657 336 aa10.6□□□□□ -0.71
TPM4-209ENST00000588483 SLC31A1O15431 190 aa10.6□□□□□ -0.71
TPM4-209ENST00000588483 PIGNO95427 931 aa10.6□□□□□ -0.71
TPM4-209ENST00000588483 THEGLP0DJG4 465 aa10.6□□□□□ -0.71
TPM4-209ENST00000588483 PRLRP16471 622 aa10.6□□□□□ -0.71
TPM4-209ENST00000588483 SERPINA4P29622 427 aa10.6□□□□□ -0.71
TPM4-209ENST00000588483 MMP12P39900 470 aa10.6□□□□□ -0.71
TPM4-209ENST00000588483 SLC1A1P43005 524 aa10.6□□□□□ -0.71
TPM4-209ENST00000588483 SLC10A7Q0GE19 358 aa10.6□□□□□ -0.71
TPM4-209ENST00000588483 GALNT2Q10471 571 aa10.6□□□□□ -0.71
TPM4-209ENST00000588483 KRT81Q14533 505 aa10.6□□□□□ -0.71
TPM4-209ENST00000588483 LBRQ14739 615 aaKnown RBP10.6□□□□□ -0.71
TPM4-209ENST00000588483 UGP2Q16851 508 aa10.6□□□□□ -0.71
TPM4-209ENST00000588483 ATP13A4Q4VNC1 1196 aa10.6□□□□□ -0.71
TPM4-209ENST00000588483 ANKRD20A8PQ5CZ79 823 aa10.6□□□□□ -0.71
TPM4-209ENST00000588483 NCBP2-AS2Q69YL0 99 aa10.6□□□□□ -0.71
TPM4-209ENST00000588483 ALG1LQ6GMV1 187 aa10.6□□□□□ -0.71
TPM4-209ENST00000588483 TTC7BQ86TV6 843 aa10.6□□□□□ -0.71
TPM4-209ENST00000588483 GAS2L3Q86XJ1 694 aa10.6□□□□□ -0.71
TPM4-209ENST00000588483 SLC22A18ASQ8N1D0 253 aa10.6□□□□□ -0.71
TPM4-209ENST00000588483 ATPAF2Q8N5M1 289 aa10.6□□□□□ -0.71
TPM4-209ENST00000588483 TEX26Q8N6G2 289 aa10.6□□□□□ -0.71
TPM4-209ENST00000588483 NETO2Q8NC67 525 aa10.6□□□□□ -0.71
TPM4-209ENST00000588483 PCDH19Q8TAB3 1148 aa10.6□□□□□ -0.71
TPM4-209ENST00000588483 CENPTQ96BT3 561 aa10.6□□□□□ -0.71
TPM4-209ENST00000588483 KLHDC7BQ96G42 594 aa10.6□□□□□ -0.71
TPM4-209ENST00000588483 CAMK1GQ96NX5 476 aa10.6□□□□□ -0.71
TPM4-209ENST00000588483 PANX2Q96RD6 677 aa10.6□□□□□ -0.71
TPM4-209ENST00000588483 ATP13A3Q9H7F0 1226 aa10.6□□□□□ -0.71
TPM4-209ENST00000588483 KLHL11Q9NVR0 708 aa10.6□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms