RNA–Protein interactions for RNA: ENST00000588419.1

HDAC5-208, Transcript of histone deacetylase 5, humanhuman

TSL 2

Gene HDAC5, Length 742 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC5-208ENST00000588419 ARHGAP40Q5TG30 622 aa13.89□□□□□ -0.19
HDAC5-208ENST00000588419 TRIM72Q6ZMU5 477 aa13.89□□□□□ -0.19
HDAC5-208ENST00000588419 ARCQ7LC44 396 aa13.89□□□□□ -0.19
HDAC5-208ENST00000588419 SLFN11Q7Z7L1 901 aa13.89□□□□□ -0.19
HDAC5-208ENST00000588419 ZSCAN30Q86W11 494 aa13.89□□□□□ -0.19
HDAC5-208ENST00000588419 DENND6BQ8NEG7 585 aa13.89□□□□□ -0.19
HDAC5-208ENST00000588419 BTN2A2Q8WVV5 523 aa13.89□□□□□ -0.19
HDAC5-208ENST00000588419 GLMNQ92990 594 aa13.89□□□□□ -0.19
HDAC5-208ENST00000588419 ATXN7L3BQ96GX2 97 aa13.89□□□□□ -0.19
HDAC5-208ENST00000588419 VCPIP1Q96JH7 1222 aa13.89□□□□□ -0.19
HDAC5-208ENST00000588419 ZNF578Q96N58 590 aaPredicted RBP13.89□□□□□ -0.19
HDAC5-208ENST00000588419 LENG8Q96PV6 779 aaPredicted RBP13.89□□□□□ -0.19
HDAC5-208ENST00000588419 EPAS1Q99814 870 aa13.89□□□□□ -0.19
HDAC5-208ENST00000588419 LRRC61Q9BV99 259 aa13.89□□□□□ -0.19
HDAC5-208ENST00000588419 C1QTNF2Q9BXJ5 285 aa13.89□□□□□ -0.19
HDAC5-208ENST00000588419 SLC13A1Q9BZW2 595 aa13.89□□□□□ -0.19
HDAC5-208ENST00000588419 POLR1BQ9H9Y6 1135 aa13.89□□□□□ -0.19
HDAC5-208ENST00000588419 SIRPGQ9P1W8 387 aa13.89□□□□□ -0.19
HDAC5-208ENST00000588419 TEX51A0A1B0GUA7 166 aa13.88□□□□□ -0.19
HDAC5-208ENST00000588419 ANKRD62A6NC57 917 aa13.88□□□□□ -0.19
HDAC5-208ENST00000588419 CASC3O15234 703 aaKnown RBP13.88□□□□□ -0.19
HDAC5-208ENST00000588419 INSIG1O15503 277 aa13.88□□□□□ -0.19
HDAC5-208ENST00000588419 KDELR3O43731 214 aa13.88□□□□□ -0.19
HDAC5-208ENST00000588419 C1QL1O75973 258 aa13.88□□□□□ -0.19
HDAC5-208ENST00000588419 RBMS1P29558 406 aaKnown RBP13.88□□□□□ -0.19
HDAC5-208ENST00000588419 RFC1P35251 1148 aaPredicted RBP13.88□□□□□ -0.19
HDAC5-208ENST00000588419 JAM2P57087 298 aa13.88□□□□□ -0.19
HDAC5-208ENST00000588419 TMPRSS3P57727 454 aa13.88□□□□□ -0.19
HDAC5-208ENST00000588419 PFN3P60673 137 aa13.88□□□□□ -0.19
HDAC5-208ENST00000588419 NRG1Q02297 640 aaPredicted RBP13.88□□□□□ -0.19
HDAC5-208ENST00000588419 IRF4Q15306 451 aa13.88□□□□□ -0.19
HDAC5-208ENST00000588419 ISXQ2M1V0 245 aa13.88□□□□□ -0.19
HDAC5-208ENST00000588419 KLHL40Q2TBA0 621 aa13.88□□□□□ -0.19
HDAC5-208ENST00000588419 CFAP58Q5T655 872 aa13.88□□□□□ -0.19
HDAC5-208ENST00000588419 DNAJC24Q6P3W2 148 aa13.88□□□□□ -0.19
HDAC5-208ENST00000588419 RBM44Q6ZP01 1051 aaKnown RBP13.88□□□□□ -0.19
HDAC5-208ENST00000588419 RD3Q7Z3Z2 195 aa13.88□□□□□ -0.19
HDAC5-208ENST00000588419 LSMEM2Q8N112 164 aa13.88□□□□□ -0.19
HDAC5-208ENST00000588419 PAF1Q8N7H5 531 aa13.88□□□□□ -0.19
HDAC5-208ENST00000588419 NEK11Q8NG66 645 aa13.88□□□□□ -0.19
HDAC5-208ENST00000588419 HMCESQ96FZ2 354 aa13.88□□□□□ -0.19
HDAC5-208ENST00000588419 MCEEQ96PE7 176 aa13.88□□□□□ -0.19
HDAC5-208ENST00000588419 PCDHB18PQ96TA0 734 aa13.88□□□□□ -0.19
HDAC5-208ENST00000588419 C1QTNF7Q9BXJ2 289 aa13.88□□□□□ -0.19
HDAC5-208ENST00000588419 KLC2Q9H0B6 622 aa13.88□□□□□ -0.19
HDAC5-208ENST00000588419 MBNL1Q9NR56 388 aaKnown RBP13.88□□□□□ -0.19
HDAC5-208ENST00000588419 THSD1Q9NS62 852 aa13.88□□□□□ -0.19
HDAC5-208ENST00000588419 NCKIPSDQ9NZQ3 722 aa13.88□□□□□ -0.19
HDAC5-208ENST00000588419 GULP1Q9UBP9 304 aa13.88□□□□□ -0.19
HDAC5-208ENST00000588419 CSNK1G3Q9Y6M4 447 aa13.88□□□□□ -0.19
HDAC5-208ENST00000588419 ZSCAN5CA6NGD5 496 aaPredicted RBP13.87□□□□□ -0.19
HDAC5-208ENST00000588419 GCATO75600 419 aa13.87□□□□□ -0.19
HDAC5-208ENST00000588419 PCCBP05166 539 aa13.87□□□□□ -0.19
HDAC5-208ENST00000588419 CALB1P05937 261 aa13.87□□□□□ -0.19
HDAC5-208ENST00000588419 CELA2BP08218 269 aaPredicted RBP13.87□□□□□ -0.19
HDAC5-208ENST00000588419 EIF4A3P38919 411 aaKnown RBP13.87□□□□□ -0.19
HDAC5-208ENST00000588419 LSSP48449 732 aa13.87□□□□□ -0.19
HDAC5-208ENST00000588419 RPIAP49247 311 aa13.87□□□□□ -0.19
HDAC5-208ENST00000588419 PPARDQ03181 441 aa13.87□□□□□ -0.19
HDAC5-208ENST00000588419 CLEC16AQ2KHT3 1053 aa13.87□□□□□ -0.19
HDAC5-208ENST00000588419 WDR59Q6PJI9 974 aa13.87□□□□□ -0.19
HDAC5-208ENST00000588419 MACC1Q6ZN28 852 aa13.87□□□□□ -0.19
HDAC5-208ENST00000588419 HID1Q8IV36 788 aa13.87□□□□□ -0.19
HDAC5-208ENST00000588419 PLPP6Q8IY26 295 aa13.87□□□□□ -0.19
HDAC5-208ENST00000588419 SLC35F3Q8IY50 421 aa13.87□□□□□ -0.19
HDAC5-208ENST00000588419 RTL3Q8N8U3 475 aaKnown RBP13.87□□□□□ -0.19
HDAC5-208ENST00000588419 TTYH3Q9C0H2 523 aa13.87□□□□□ -0.19
HDAC5-208ENST00000588419 SALL4Q9UJQ4 1053 aa13.87□□□□□ -0.19
HDAC5-208ENST00000588419 PNMA8BQ9ULN7 279 aaPredicted RBP13.87□□□□□ -0.19
HDAC5-208ENST00000588419 SCN8AQ9UQD0 1980 aa13.87□□□□□ -0.19
HDAC5-208ENST00000588419 PMS2P1A4D2B8 440 aa13.86□□□□□ -0.19
HDAC5-208ENST00000588419 EME2A4GXA9 379 aaPredicted RBP13.86□□□□□ -0.19
HDAC5-208ENST00000588419 RASA4BC9J798 803 aa13.86□□□□□ -0.19
HDAC5-208ENST00000588419 AGRPO00253 132 aa13.86□□□□□ -0.19
HDAC5-208ENST00000588419 AREL1O15033 823 aa13.86□□□□□ -0.19
HDAC5-208ENST00000588419 RASA4O43374 803 aa13.86□□□□□ -0.19
HDAC5-208ENST00000588419 PRKCGP05129 697 aa13.86□□□□□ -0.19
HDAC5-208ENST00000588419 UNGP13051 313 aaPredicted RBP13.86□□□□□ -0.19
HDAC5-208ENST00000588419 CTSEP14091 401 aa13.86□□□□□ -0.19
HDAC5-208ENST00000588419 TSHRP16473 764 aa13.86□□□□□ -0.19
HDAC5-208ENST00000588419 COPB1P53618 953 aaKnown RBP13.86□□□□□ -0.19
HDAC5-208ENST00000588419 TPI1P60174 286 aa13.86□□□□□ -0.19
HDAC5-208ENST00000588419 PTP4A2Q12974 167 aa13.86□□□□□ -0.19
HDAC5-208ENST00000588419 SPIDRQ14159 915 aa13.86□□□□□ -0.19
HDAC5-208ENST00000588419 C6orf132Q5T0Z8 1188 aa13.86□□□□□ -0.19
HDAC5-208ENST00000588419 ESRP1Q6NXG1 681 aaKnown RBP13.86□□□□□ -0.19
HDAC5-208ENST00000588419 TP53I13Q8NBR0 393 aaPredicted RBP13.86□□□□□ -0.19
HDAC5-208ENST00000588419 C3orf20Q8ND61 904 aa13.86□□□□□ -0.19
HDAC5-208ENST00000588419 ANKRD20A12PQ8NF67 263 aa13.86□□□□□ -0.19
HDAC5-208ENST00000588419 TSACCQ96A04 125 aaPredicted RBP13.86□□□□□ -0.19
HDAC5-208ENST00000588419 NTAN1Q96AB6 310 aa13.86□□□□□ -0.19
HDAC5-208ENST00000588419 CENPTQ96BT3 561 aa13.86□□□□□ -0.19
HDAC5-208ENST00000588419 CCDC3Q9BQI4 270 aa13.86□□□□□ -0.19
HDAC5-208ENST00000588419 NOL6Q9H6R4 1146 aaKnown RBP13.86□□□□□ -0.19
HDAC5-208ENST00000588419 CATSPERBQ9H7T0 1116 aa13.86□□□□□ -0.19
HDAC5-208ENST00000588419 ASCL3Q9NQ33 180 aa13.86□□□□□ -0.19
HDAC5-208ENST00000588419 FANCLQ9NW38 375 aa13.86□□□□□ -0.19
HDAC5-208ENST00000588419 GPATCH2LQ9NWQ4 482 aa13.86□□□□□ -0.19
HDAC5-208ENST00000588419 UBA2Q9UBT2 640 aaPredicted RBP13.86□□□□□ -0.19
HDAC5-208ENST00000588419 ENTPD2Q9Y5L3 495 aa13.86□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 49.1 ms