RNA–Protein interactions for RNA: ENST00000587730.5

DDX39A-206, Transcript of DExD-box helicase 39A, humanhuman

TSL 1 (best)

Gene DDX39A, Length 1,813 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39A-206ENST00000587730 GTSE1Q9NYZ3 720 aa18.76■□□□□ 0.59
DDX39A-206ENST00000587730 CIDEBQ9UHD4 219 aa18.76■□□□□ 0.59
DDX39A-206ENST00000587730 IPO11Q9UI26 975 aaKnown RBP18.76■□□□□ 0.59
DDX39A-206ENST00000587730 G3BP2Q9UN86 482 aaKnown RBP18.76■□□□□ 0.59
DDX39A-206ENST00000587730 PCDHGA7Q9Y5G6 932 aa18.76■□□□□ 0.59
DDX39A-206ENST00000587730 BBIP1A8MTZ0 92 aa18.75■□□□□ 0.59
DDX39A-206ENST00000587730 I6L893 689 aaPredicted RBP18.75■□□□□ 0.59
DDX39A-206ENST00000587730 PSMD12O00232 456 aaPredicted RBP18.75■□□□□ 0.59
DDX39A-206ENST00000587730 AMHP03971 560 aa18.75■□□□□ 0.59
DDX39A-206ENST00000587730 USP17L7P0C7H9 530 aa18.75■□□□□ 0.59
DDX39A-206ENST00000587730 CPB1P15086 417 aa18.75■□□□□ 0.59
DDX39A-206ENST00000587730 PAX3P23760 479 aa18.75■□□□□ 0.59
DDX39A-206ENST00000587730 SLC7A1P30825 629 aa18.75■□□□□ 0.59
DDX39A-206ENST00000587730 HOXC13P31276 330 aa18.75■□□□□ 0.59
DDX39A-206ENST00000587730 MYBPC1Q00872 1141 aa18.75■□□□□ 0.59
DDX39A-206ENST00000587730 PFKPQ01813 784 aa18.75■□□□□ 0.59
DDX39A-206ENST00000587730 PPP2R5DQ14738 602 aa18.75■□□□□ 0.59
DDX39A-206ENST00000587730 SPATS1Q496A3 300 aa18.75■□□□□ 0.59
DDX39A-206ENST00000587730 NADK2Q4G0N4 442 aa18.75■□□□□ 0.59
DDX39A-206ENST00000587730 TMEM198Q66K66 360 aa18.75■□□□□ 0.59
DDX39A-206ENST00000587730 GOLM1Q8NBJ4 401 aa18.75■□□□□ 0.59
DDX39A-206ENST00000587730 RNF34Q969K3 372 aa18.75■□□□□ 0.59
DDX39A-206ENST00000587730 ROPN1LQ96C74 230 aa18.75■□□□□ 0.59
DDX39A-206ENST00000587730 PGLYRP2Q96PD5 576 aa18.75■□□□□ 0.59
DDX39A-206ENST00000587730 ASB2Q96Q27 587 aa18.75■□□□□ 0.59
DDX39A-206ENST00000587730 RBM38Q9H0Z9 239 aaKnown RBP18.75■□□□□ 0.59
DDX39A-206ENST00000587730 RNF39Q9H2S5 420 aa18.75■□□□□ 0.59
DDX39A-206ENST00000587730 FBXO5Q9UKT4 447 aa18.75■□□□□ 0.59
DDX39A-206ENST00000587730 TNPO2O14787 897 aaKnown RBP18.74■□□□□ 0.59
DDX39A-206ENST00000587730 GPC4O75487 556 aa18.74■□□□□ 0.59
DDX39A-206ENST00000587730 IPO13O94829 963 aaKnown RBP18.74■□□□□ 0.59
DDX39A-206ENST00000587730 SNRPB2P08579 225 aaKnown RBP18.74■□□□□ 0.59
DDX39A-206ENST00000587730 HOXB8P17481 243 aaPredicted RBP18.74■□□□□ 0.59
DDX39A-206ENST00000587730 ADRA1AP35348 466 aa18.74■□□□□ 0.59
DDX39A-206ENST00000587730 AVPR1AP37288 418 aa18.74■□□□□ 0.59
DDX39A-206ENST00000587730 SULT2A1Q06520 285 aa18.74■□□□□ 0.59
DDX39A-206ENST00000587730 PDAP1Q13442 181 aaKnown RBP18.74■□□□□ 0.59
DDX39A-206ENST00000587730 FASTKQ14296 549 aaKnown RBP18.74■□□□□ 0.59
DDX39A-206ENST00000587730 ACAP2Q15057 778 aa18.74■□□□□ 0.59
DDX39A-206ENST00000587730 SLC14A2Q15849 920 aa18.74■□□□□ 0.59
DDX39A-206ENST00000587730 TSTD2Q5T7W7 516 aa18.74■□□□□ 0.59
DDX39A-206ENST00000587730 NEPROQ6NW34 567 aa18.74■□□□□ 0.59
DDX39A-206ENST00000587730 PRMT9Q6P2P2 845 aa18.74■□□□□ 0.59
DDX39A-206ENST00000587730 KLHDC10Q6PID8 442 aa18.74■□□□□ 0.59
DDX39A-206ENST00000587730 TXNDC5Q8NBS9 432 aaKnown RBP18.74■□□□□ 0.59
DDX39A-206ENST00000587730 SMG8Q8ND04 991 aaKnown RBP18.74■□□□□ 0.59
DDX39A-206ENST00000587730 FAM81AQ8TBF8 368 aa18.74■□□□□ 0.59
DDX39A-206ENST00000587730 SPPL2BQ8TCT7 592 aa18.74■□□□□ 0.59
DDX39A-206ENST00000587730 NMD3Q96D46 503 aaKnown RBP18.74■□□□□ 0.59
DDX39A-206ENST00000587730 PPP1R36Q96LQ0 422 aa18.74■□□□□ 0.59
DDX39A-206ENST00000587730 RANBP9Q96S59 729 aa18.74■□□□□ 0.59
DDX39A-206ENST00000587730 TINF2Q9BSI4 451 aa18.74■□□□□ 0.59
DDX39A-206ENST00000587730 FSD1LQ9BXM9 530 aa18.74■□□□□ 0.59
DDX39A-206ENST00000587730 TRIM15Q9C019 465 aa18.74■□□□□ 0.59
DDX39A-206ENST00000587730 UPF3AQ9H1J1 476 aaKnown RBP18.74■□□□□ 0.59
DDX39A-206ENST00000587730 TSPYL2Q9H2G4 693 aaPredicted RBP18.74■□□□□ 0.59
DDX39A-206ENST00000587730 C8orf4Q9NR00 106 aa18.74■□□□□ 0.59
DDX39A-206ENST00000587730 ARHGEF38Q9NXL2 777 aa18.74■□□□□ 0.59
DDX39A-206ENST00000587730 CACNA2D2Q9NY47 1150 aa18.74■□□□□ 0.59
DDX39A-206ENST00000587730 GOLGA8TH3BQL2 631 aa18.74■□□□□ 0.59
DDX39A-206ENST00000587730 TRIM24O15164 1050 aa18.74■□□□□ 0.59
DDX39A-206ENST00000587730 LTA4HP09960 611 aaKnown RBP18.74■□□□□ 0.59
DDX39A-206ENST00000587730 ETS2P15036 469 aa18.74■□□□□ 0.59
DDX39A-206ENST00000587730 ZNF26P17031 533 aaPredicted RBP18.74■□□□□ 0.59
DDX39A-206ENST00000587730 DPP6P42658 865 aa18.74■□□□□ 0.59
DDX39A-206ENST00000587730 SLC1A2P43004 574 aa18.74■□□□□ 0.59
DDX39A-206ENST00000587730 TAS2R39P59534 338 aa18.74■□□□□ 0.59
DDX39A-206ENST00000587730 TUBA4AP68366 448 aa18.74■□□□□ 0.59
DDX39A-206ENST00000587730 LRP8Q14114 963 aa18.74■□□□□ 0.59
DDX39A-206ENST00000587730 MFSD10Q14728 455 aa18.74■□□□□ 0.59
DDX39A-206ENST00000587730 MGAT5BQ3V5L5 792 aa18.74■□□□□ 0.59
DDX39A-206ENST00000587730 TECRLQ5HYJ1 363 aa18.74■□□□□ 0.59
DDX39A-206ENST00000587730 OTOP3Q7RTS5 596 aa18.74■□□□□ 0.59
DDX39A-206ENST00000587730 CEP97Q8IW35 865 aa18.74■□□□□ 0.59
DDX39A-206ENST00000587730 PACRGLQ8N7B6 248 aa18.74■□□□□ 0.59
DDX39A-206ENST00000587730 IPMKQ8NFU5 416 aa18.74■□□□□ 0.59
DDX39A-206ENST00000587730 HEXDCQ8WVB3 486 aa18.74■□□□□ 0.59
DDX39A-206ENST00000587730 EZH1Q92800 747 aaPredicted RBP18.74■□□□□ 0.59
DDX39A-206ENST00000587730 PCED1BQ96HM7 432 aa18.74■□□□□ 0.59
DDX39A-206ENST00000587730 KLHL32Q96NJ5 620 aa18.74■□□□□ 0.59
DDX39A-206ENST00000587730 NPAS2Q99743 824 aa18.74■□□□□ 0.59
DDX39A-206ENST00000587730 FICDQ9BVA6 458 aa18.74■□□□□ 0.59
DDX39A-206ENST00000587730 RHOBTB2Q9BYZ6 727 aa18.74■□□□□ 0.59
DDX39A-206ENST00000587730 UBP1Q9NZI7 540 aa18.74■□□□□ 0.59
DDX39A-206ENST00000587730 CLEC11AQ9Y240 323 aa18.74■□□□□ 0.59
DDX39A-206ENST00000587730 FNDC1Q4ZHG4 1894 aaPredicted RBP18.73■□□□□ 0.59
DDX39A-206ENST00000587730 TCRBV3S1A0A5B6 114 aa18.73■□□□□ 0.59
DDX39A-206ENST00000587730 HHLA1C9JL84 531 aa18.73■□□□□ 0.59
DDX39A-206ENST00000587730 PAPSS2O95340 614 aaPredicted RBP18.73■□□□□ 0.59
DDX39A-206ENST00000587730 RPL9P32969 192 aaKnown RBP18.73■□□□□ 0.59
DDX39A-206ENST00000587730 ADAM17P78536 824 aa18.73■□□□□ 0.59
DDX39A-206ENST00000587730 MPP1Q00013 466 aa18.73■□□□□ 0.59
DDX39A-206ENST00000587730 GRB14Q14449 540 aa18.73■□□□□ 0.59
DDX39A-206ENST00000587730 POU6F1Q14863 301 aa18.73■□□□□ 0.59
DDX39A-206ENST00000587730 PABPC1LQ4VXU2 614 aaKnown RBP18.73■□□□□ 0.59
DDX39A-206ENST00000587730 ZNF470Q6ECI4 717 aa18.73■□□□□ 0.59
DDX39A-206ENST00000587730 DENND5AQ6IQ26 1287 aa18.73■□□□□ 0.59
DDX39A-206ENST00000587730 CHERPQ8IWX8 916 aaKnown RBP18.73■□□□□ 0.59
DDX39A-206ENST00000587730 PCYOX1LQ8NBM8 494 aa18.73■□□□□ 0.59
DDX39A-206ENST00000587730 ZMIZ2Q8NF64 920 aa18.73■□□□□ 0.59
Retrieved 100 of 20,778 RNA–protein pairs in 42.6 ms