RNA–Protein interactions for RNA: ENST00000587290.5

PRKCSH-204, Transcript of protein kinase C substrate 80K-H, humanhuman

TSL 2

Gene PRKCSH, Length 780 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCSH-204ENST00000587290 ABCG4Q9H172 646 aa15.39■□□□□ 0.05
PRKCSH-204ENST00000587290 TMEM51Q9NW97 253 aa15.39■□□□□ 0.05
PRKCSH-204ENST00000587290 GPATCH2LQ9NWQ4 482 aa15.39■□□□□ 0.05
PRKCSH-204ENST00000587290 LHX3Q9UBR4 397 aa15.39■□□□□ 0.05
PRKCSH-204ENST00000587290 APOBEC3BQ9UH17 382 aaKnown RBP15.39■□□□□ 0.05
PRKCSH-204ENST00000587290 TCRBV5S1A1TA0A578 114 aa15.38■□□□□ 0.05
PRKCSH-204ENST00000587290 RASA4BC9J798 803 aa15.38■□□□□ 0.05
PRKCSH-204ENST00000587290 MUSKO15146 869 aa15.38■□□□□ 0.05
PRKCSH-204ENST00000587290 RASA4O43374 803 aa15.38■□□□□ 0.05
PRKCSH-204ENST00000587290 PRKCGP05129 697 aa15.38■□□□□ 0.05
PRKCSH-204ENST00000587290 TIMP2P16035 220 aa15.38■□□□□ 0.05
PRKCSH-204ENST00000587290 THOP1P52888 689 aa15.38■□□□□ 0.05
PRKCSH-204ENST00000587290 GEMIN4P57678 1058 aaKnown RBP15.38■□□□□ 0.05
PRKCSH-204ENST00000587290 CXADRP78310 365 aa15.38■□□□□ 0.05
PRKCSH-204ENST00000587290 OGDHQ02218 1023 aa15.38■□□□□ 0.05
PRKCSH-204ENST00000587290 IRF4Q15306 451 aa15.38■□□□□ 0.05
PRKCSH-204ENST00000587290 KLHL40Q2TBA0 621 aa15.38■□□□□ 0.05
PRKCSH-204ENST00000587290 PRRT3Q5FWE3 981 aa15.38■□□□□ 0.05
PRKCSH-204ENST00000587290 C3orf38Q5JPI3 329 aa15.38■□□□□ 0.05
PRKCSH-204ENST00000587290 EFHC2Q5JST6 749 aa15.38■□□□□ 0.05
PRKCSH-204ENST00000587290 DNAJC24Q6P3W2 148 aa15.38■□□□□ 0.05
PRKCSH-204ENST00000587290 DNAAF5Q86Y56 855 aa15.38■□□□□ 0.05
PRKCSH-204ENST00000587290 PHF13Q86YI8 300 aaPredicted RBP15.38■□□□□ 0.05
PRKCSH-204ENST00000587290 PHACTR4Q8IZ21 702 aa15.38■□□□□ 0.05
PRKCSH-204ENST00000587290 NEK11Q8NG66 645 aa15.38■□□□□ 0.05
PRKCSH-204ENST00000587290 FAM174AQ8TBP5 190 aa15.38■□□□□ 0.05
PRKCSH-204ENST00000587290 ATXN7L3BQ96GX2 97 aa15.38■□□□□ 0.05
PRKCSH-204ENST00000587290 UBL7Q96S82 380 aaPredicted RBP15.38■□□□□ 0.05
PRKCSH-204ENST00000587290 EPAS1Q99814 870 aa15.38■□□□□ 0.05
PRKCSH-204ENST00000587290 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP15.38■□□□□ 0.05
PRKCSH-204ENST00000587290 DUSP23Q9BVJ7 150 aa15.38■□□□□ 0.05
PRKCSH-204ENST00000587290 OSBPL1AQ9BXW6 950 aa15.38■□□□□ 0.05
PRKCSH-204ENST00000587290 TTYH3Q9C0H2 523 aa15.38■□□□□ 0.05
PRKCSH-204ENST00000587290 CLPBQ9H078 707 aa15.38■□□□□ 0.05
PRKCSH-204ENST00000587290 HELZ2Q9BYK8 2649 aaKnown RBP15.37■□□□□ 0.05
PRKCSH-204ENST00000587290 SIGLEC16A6NMB1 481 aa15.37■□□□□ 0.05
PRKCSH-204ENST00000587290 LGALS16A8MUM7 142 aa15.37■□□□□ 0.05
PRKCSH-204ENST00000587290 ATMINO43313 823 aaPredicted RBP15.37■□□□□ 0.05
PRKCSH-204ENST00000587290 IGSF6O95976 241 aa15.37■□□□□ 0.05
PRKCSH-204ENST00000587290 CALB1P05937 261 aa15.37■□□□□ 0.05
PRKCSH-204ENST00000587290 GP1BAP07359 652 aa15.37■□□□□ 0.05
PRKCSH-204ENST00000587290 ADKP55263 362 aaKnown RBP15.37■□□□□ 0.05
PRKCSH-204ENST00000587290 GSCP56915 257 aaPredicted RBP15.37■□□□□ 0.05
PRKCSH-204ENST00000587290 CYTH1Q15438 398 aa15.37■□□□□ 0.05
PRKCSH-204ENST00000587290 CT47A1Q5JQC4 288 aaPredicted RBP15.37■□□□□ 0.05
PRKCSH-204ENST00000587290 KCTD16Q68DU8 428 aa15.37■□□□□ 0.05
PRKCSH-204ENST00000587290 SLC35F3Q8IY50 421 aa15.37■□□□□ 0.05
PRKCSH-204ENST00000587290 TP53I13Q8NBR0 393 aaPredicted RBP15.37■□□□□ 0.05
PRKCSH-204ENST00000587290 DENND6BQ8NEG7 585 aa15.37■□□□□ 0.05
PRKCSH-204ENST00000587290 CXorf40AQ8TE69 158 aa15.37■□□□□ 0.05
PRKCSH-204ENST00000587290 SLC39A7Q92504 469 aa15.37■□□□□ 0.05
PRKCSH-204ENST00000587290 CELF6Q96J87 481 aaKnown RBP15.37■□□□□ 0.05
PRKCSH-204ENST00000587290 HIC2Q96JB3 615 aa15.37■□□□□ 0.05
PRKCSH-204ENST00000587290 IL12RB2Q99665 862 aa15.37■□□□□ 0.05
PRKCSH-204ENST00000587290 SYNDIG1Q9H7V2 258 aa15.37■□□□□ 0.05
PRKCSH-204ENST00000587290 CPNE5Q9HCH3 593 aa15.37■□□□□ 0.05
PRKCSH-204ENST00000587290 TAS2R14Q9NYV8 317 aa15.37■□□□□ 0.05
PRKCSH-204ENST00000587290 FZD10Q9ULW2 581 aa15.37■□□□□ 0.05
PRKCSH-204ENST00000587290 SATB2Q9UPW6 733 aa15.37■□□□□ 0.05
PRKCSH-204ENST00000587290 J3KR12 359 aa15.36■□□□□ 0.05
PRKCSH-204ENST00000587290 TM7SF2O76062 418 aa15.36■□□□□ 0.05
PRKCSH-204ENST00000587290 TPM2P07951 284 aa15.36■□□□□ 0.05
PRKCSH-204ENST00000587290 TSHRP16473 764 aa15.36■□□□□ 0.05
PRKCSH-204ENST00000587290 EIF4A3P38919 411 aaKnown RBP15.36■□□□□ 0.05
PRKCSH-204ENST00000587290 RGRP47804 291 aa15.36■□□□□ 0.05
PRKCSH-204ENST00000587290 DUSP3P51452 185 aaPredicted RBP15.36■□□□□ 0.05
PRKCSH-204ENST00000587290 ZNF143P52747 638 aaPredicted RBP15.36■□□□□ 0.05
PRKCSH-204ENST00000587290 PCBP4P57723 403 aaKnown RBP15.36■□□□□ 0.05
PRKCSH-204ENST00000587290 UBXN1Q04323 297 aa15.36■□□□□ 0.05
PRKCSH-204ENST00000587290 SERINC3Q13530 473 aa15.36■□□□□ 0.05
PRKCSH-204ENST00000587290 ISXQ2M1V0 245 aa15.36■□□□□ 0.05
PRKCSH-204ENST00000587290 FAXCQ5TGI0 409 aa15.36■□□□□ 0.05
PRKCSH-204ENST00000587290 FOXR1Q6PIV2 292 aa15.36■□□□□ 0.05
PRKCSH-204ENST00000587290 PCSK4Q6UW60 755 aa15.36■□□□□ 0.05
PRKCSH-204ENST00000587290 ZSWIM9Q86XI8 627 aa15.36■□□□□ 0.05
PRKCSH-204ENST00000587290 AGPAT1Q99943 283 aa15.36■□□□□ 0.05
PRKCSH-204ENST00000587290 ASCL3Q9NQ33 180 aa15.36■□□□□ 0.05
PRKCSH-204ENST00000587290 CSNK1G3Q9Y6M4 447 aa15.36■□□□□ 0.05
PRKCSH-204ENST00000587290 UNC13CQ8NB66 2214 aa15.36■□□□□ 0.05
PRKCSH-204ENST00000587290 ARHGEF17Q96PE2 2063 aaPredicted RBP15.36■□□□□ 0.05
PRKCSH-204ENST00000587290 CXorf51AA0A1B0GTR3 108 aa15.35■□□□□ 0.05
PRKCSH-204ENST00000587290 EME2A4GXA9 379 aaPredicted RBP15.35■□□□□ 0.05
PRKCSH-204ENST00000587290 ZSCAN5CA6NGD5 496 aaPredicted RBP15.35■□□□□ 0.05
PRKCSH-204ENST00000587290 TMCO5BA8MYB1 307 aa15.35■□□□□ 0.05
PRKCSH-204ENST00000587290 NR0B2Q15466 257 aa15.35■□□□□ 0.05
PRKCSH-204ENST00000587290 CA9Q16790 459 aa15.35■□□□□ 0.05
PRKCSH-204ENST00000587290 WSCD2Q2TBF2 565 aa15.35■□□□□ 0.05
PRKCSH-204ENST00000587290 PPP1R15BQ5SWA1 713 aa15.35■□□□□ 0.05
PRKCSH-204ENST00000587290 RBM43Q6ZSC3 357 aaKnown RBP15.35■□□□□ 0.05
PRKCSH-204ENST00000587290 APTXQ7Z2E3 356 aaKnown RBP15.35■□□□□ 0.05
PRKCSH-204ENST00000587290 ZNF248Q8NDW4 579 aa15.35■□□□□ 0.05
PRKCSH-204ENST00000587290 ASB12Q8WXK4 309 aa15.35■□□□□ 0.05
PRKCSH-204ENST00000587290 TSACCQ96A04 125 aaPredicted RBP15.35■□□□□ 0.05
PRKCSH-204ENST00000587290 ARHGEF26Q96DR7 871 aa15.35■□□□□ 0.05
PRKCSH-204ENST00000587290 VCPIP1Q96JH7 1222 aa15.35■□□□□ 0.05
PRKCSH-204ENST00000587290 NCAPGQ9BPX3 1015 aa15.35■□□□□ 0.05
PRKCSH-204ENST00000587290 BOCQ9BWV1 1114 aa15.35■□□□□ 0.05
PRKCSH-204ENST00000587290 HSD3B7Q9H2F3 369 aa15.35■□□□□ 0.05
PRKCSH-204ENST00000587290 POLR1BQ9H9Y6 1135 aa15.35■□□□□ 0.05
PRKCSH-204ENST00000587290 PDFQ9HBH1 243 aa15.35■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 16.8 ms