RNA–Protein interactions for RNA: ENST00000586796.1

RETREG3-204, Transcript of reticulophagy regulator family member 3, humanhuman

TSL 2

Gene RETREG3, Length 576 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RETREG3-204ENST00000586796 KCNK3O14649 394 aa21.68■■□□□ 1.06
RETREG3-204ENST00000586796 PCDH8O95206 1070 aa21.68■■□□□ 1.06
RETREG3-204ENST00000586796 CR2P20023 1033 aa21.68■■□□□ 1.06
RETREG3-204ENST00000586796 XPAP23025 273 aaPredicted RBP21.68■■□□□ 1.06
RETREG3-204ENST00000586796 MPLP40238 635 aa21.68■■□□□ 1.06
RETREG3-204ENST00000586796 AP1S1P61966 158 aa21.68■■□□□ 1.06
RETREG3-204ENST00000586796 DSC2Q02487 901 aa21.68■■□□□ 1.06
RETREG3-204ENST00000586796 ZNF569Q5MCW4 686 aa21.68■■□□□ 1.06
RETREG3-204ENST00000586796 WDR45BQ5MNZ6 344 aa21.68■■□□□ 1.06
RETREG3-204ENST00000586796 ACTL9Q8TC94 416 aa21.68■■□□□ 1.06
RETREG3-204ENST00000586796 PDCD6IPQ8WUM4 868 aaKnown RBP21.68■■□□□ 1.06
RETREG3-204ENST00000586796 UBE2Q2Q8WVN8 375 aa21.68■■□□□ 1.06
RETREG3-204ENST00000586796 FAM131CQ96AQ9 280 aa21.68■■□□□ 1.06
RETREG3-204ENST00000586796 AGAP3Q96P47 875 aa21.68■■□□□ 1.06
RETREG3-204ENST00000586796 POLR1EQ9GZS1 481 aaKnown RBP21.68■■□□□ 1.06
RETREG3-204ENST00000586796 C10orf88Q9H8K7 445 aa21.68■■□□□ 1.06
RETREG3-204ENST00000586796 TMEM74BQ9NUR3 256 aa21.68■■□□□ 1.06
RETREG3-204ENST00000586796 HAUS2Q9NVX0 235 aa21.68■■□□□ 1.06
RETREG3-204ENST00000586796 PCDHGC4Q9Y5F7 938 aa21.68■■□□□ 1.06
RETREG3-204ENST00000586796 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP21.68■■□□□ 1.06
RETREG3-204ENST00000586796 VPS13AQ96RL7 3174 aa21.67■■□□□ 1.06
RETREG3-204ENST00000586796 GOLGA6L9A6NEM1 432 aa21.67■■□□□ 1.06
RETREG3-204ENST00000586796 ITIH2P19823 946 aa21.67■■□□□ 1.06
RETREG3-204ENST00000586796 MAT2AP31153 395 aaKnown RBP21.67■■□□□ 1.06
RETREG3-204ENST00000586796 ABL2P42684 1182 aa21.67■■□□□ 1.06
RETREG3-204ENST00000586796 MAPK8P45983 427 aa21.67■■□□□ 1.06
RETREG3-204ENST00000586796 PPP2CBP62714 309 aa21.67■■□□□ 1.06
RETREG3-204ENST00000586796 PPP2CAP67775 309 aa21.67■■□□□ 1.06
RETREG3-204ENST00000586796 IFI35P80217 286 aaPredicted RBP21.67■■□□□ 1.06
RETREG3-204ENST00000586796 PRKD1Q15139 912 aaPredicted RBP21.67■■□□□ 1.06
RETREG3-204ENST00000586796 NOMO1Q15155 1222 aa21.67■■□□□ 1.06
RETREG3-204ENST00000586796 ZNF641Q96N77 438 aaPredicted RBP21.67■■□□□ 1.06
RETREG3-204ENST00000586796 IL12RB2Q99665 862 aa21.67■■□□□ 1.06
RETREG3-204ENST00000586796 TLR10Q9BXR5 811 aa21.67■■□□□ 1.06
RETREG3-204ENST00000586796 PCED1AQ9H1Q7 454 aa21.67■■□□□ 1.06
RETREG3-204ENST00000586796 EIF2B4Q9UI10 523 aaKnown RBP21.67■■□□□ 1.06
RETREG3-204ENST00000586796 ITM2BQ9Y287 266 aa21.67■■□□□ 1.06
RETREG3-204ENST00000586796 ZBTB32Q9Y2Y4 487 aaPredicted RBP21.67■■□□□ 1.06
RETREG3-204ENST00000586796 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP21.66■■□□□ 1.06
RETREG3-204ENST00000586796 TCRBV7S2A1N4TA0A589 114 aa21.66■■□□□ 1.06
RETREG3-204ENST00000586796 NEMP1O14524 444 aa21.66■■□□□ 1.06
RETREG3-204ENST00000586796 ENC1O14682 589 aa21.66■■□□□ 1.06
RETREG3-204ENST00000586796 RNGTTO60942 597 aaKnown RBP21.66■■□□□ 1.06
RETREG3-204ENST00000586796 PRKCGP05129 697 aa21.66■■□□□ 1.06
RETREG3-204ENST00000586796 IGHV4-34P06331 123 aa21.66■■□□□ 1.06
RETREG3-204ENST00000586796 TIMP2P16035 220 aa21.66■■□□□ 1.06
RETREG3-204ENST00000586796 EIF3EP60228 445 aaKnown RBP21.66■■□□□ 1.06
RETREG3-204ENST00000586796 ADAT2Q7Z6V5 191 aaKnown RBP21.66■■□□□ 1.06
RETREG3-204ENST00000586796 SYT12Q8IV01 421 aa21.66■■□□□ 1.06
RETREG3-204ENST00000586796 SLC35F6Q8N357 371 aa21.66■■□□□ 1.06
RETREG3-204ENST00000586796 CNTD1Q8N815 330 aa21.66■■□□□ 1.06
RETREG3-204ENST00000586796 KLK6Q92876 244 aa21.66■■□□□ 1.06
RETREG3-204ENST00000586796 QKIQ96PU8 341 aaKnown RBP eCLIP21.66■■□□□ 1.063e-6■■□□□ 11.6
RETREG3-204ENST00000586796 KDM4CQ9H3R0 1056 aa21.66■■□□□ 1.06
RETREG3-204ENST00000586796 PREBQ9HCU5 417 aa21.66■■□□□ 1.06
RETREG3-204ENST00000586796 DKK3Q9UBP4 350 aa21.66■■□□□ 1.06
RETREG3-204ENST00000586796 GGT7Q9UJ14 662 aa21.66■■□□□ 1.06
RETREG3-204ENST00000586796 PILRBQ9UKJ0 227 aa21.66■■□□□ 1.06
RETREG3-204ENST00000586796 ATP8A1Q9Y2Q0 1164 aa21.66■■□□□ 1.06
RETREG3-204ENST00000586796 PCDHGA5Q9Y5G8 931 aa21.66■■□□□ 1.06
RETREG3-204ENST00000586796 FADS3Q9Y5Q0 445 aa21.66■■□□□ 1.06
RETREG3-204ENST00000586796 MYO15AQ9UKN7 3530 aa21.66■■□□□ 1.06
RETREG3-204ENST00000586796 HACD1B0YJ81 288 aa21.65■■□□□ 1.06
RETREG3-204ENST00000586796 KIF5CO60282 957 aa21.65■■□□□ 1.06
RETREG3-204ENST00000586796 PTPN3P26045 913 aa21.65■■□□□ 1.06
RETREG3-204ENST00000586796 CXCR5P32302 372 aa21.65■■□□□ 1.06
RETREG3-204ENST00000586796 NIPAL4Q0D2K0 466 aa21.65■■□□□ 1.06
RETREG3-204ENST00000586796 SLC45A4Q5BKX6 768 aa21.65■■□□□ 1.06
RETREG3-204ENST00000586796 DARS2Q6PI48 645 aaKnown RBP21.65■■□□□ 1.06
RETREG3-204ENST00000586796 ZSWIM9Q86XI8 627 aa21.65■■□□□ 1.06
RETREG3-204ENST00000586796 AMACRQ9UHK6 382 aa21.65■■□□□ 1.06
RETREG3-204ENST00000586796 NUMA1Q14980 2115 aa21.65■■□□□ 1.06
RETREG3-204ENST00000586796 A0A1W2PQU0 124 aa21.64■■□□□ 1.05
RETREG3-204ENST00000586796 PATE3B3GLJ2 98 aa21.64■■□□□ 1.05
RETREG3-204ENST00000586796 RBP3P10745 1247 aa21.64■■□□□ 1.05
RETREG3-204ENST00000586796 RBL1P28749 1068 aa21.64■■□□□ 1.05
RETREG3-204ENST00000586796 SEMG2Q02383 582 aa21.64■■□□□ 1.05
RETREG3-204ENST00000586796 TRAF2Q12933 501 aa21.64■■□□□ 1.05
RETREG3-204ENST00000586796 XRCC4Q13426 336 aa21.64■■□□□ 1.05
RETREG3-204ENST00000586796 TEX44Q53QW1 395 aa21.64■■□□□ 1.05
RETREG3-204ENST00000586796 RALGPS1Q5JS13 557 aa21.64■■□□□ 1.05
RETREG3-204ENST00000586796 BRAT1Q6PJG6 821 aa21.64■■□□□ 1.05
RETREG3-204ENST00000586796 ZCCHC9Q8N567 271 aaKnown RBP21.64■■□□□ 1.05
RETREG3-204ENST00000586796 HTR3CQ8WXA8 447 aa21.64■■□□□ 1.05
RETREG3-204ENST00000586796 RAB7BQ96AH8 199 aa21.64■■□□□ 1.05
RETREG3-204ENST00000586796 CARD9Q9H257 536 aa21.64■■□□□ 1.05
RETREG3-204ENST00000586796 PARD6AQ9NPB6 346 aa21.64■■□□□ 1.05
RETREG3-204ENST00000586796 SEMA4GQ9NTN9 838 aa21.64■■□□□ 1.05
RETREG3-204ENST00000586796 R3HDM2Q9Y2K5 976 aaKnown RBP21.64■■□□□ 1.05
RETREG3-204ENST00000586796 DMDP11532 3685 aa21.64■■□□□ 1.05
RETREG3-204ENST00000586796 CEP192Q8TEP8 1941 aa21.63■■□□□ 1.05
RETREG3-204ENST00000586796 UPK3BL1B0FP48 263 aa21.63■■□□□ 1.05
RETREG3-204ENST00000586796 UPK3BL2E5RIL1 263 aa21.63■■□□□ 1.05
RETREG3-204ENST00000586796 TRAFD1O14545 582 aaPredicted RBP21.63■■□□□ 1.05
RETREG3-204ENST00000586796 CFIP05156 583 aa21.63■■□□□ 1.05
RETREG3-204ENST00000586796 CES1P23141 567 aa21.63■■□□□ 1.05
RETREG3-204ENST00000586796 CD86P42081 329 aa21.63■■□□□ 1.05
RETREG3-204ENST00000586796 CCR5P51681 352 aa21.63■■□□□ 1.05
RETREG3-204ENST00000586796 WASHC5Q12768 1159 aa21.63■■□□□ 1.05
RETREG3-204ENST00000586796 KLF1Q13351 362 aaPredicted RBP21.63■■□□□ 1.05
Retrieved 100 of 20,778 RNA–protein pairs in 10.5 ms