RNA–Protein interactions for RNA: ENST00000586385.5

BRCA1-225, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best) BASIC

Gene BRCA1, Length 781 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-225ENST00000586385 NEMP1O14524 444 aa12.04□□□□□ -0.48
BRCA1-225ENST00000586385 WISP1O95388 367 aa12.04□□□□□ -0.48
BRCA1-225ENST00000586385 FGFR1OPO95684 399 aaKnown RBP12.04□□□□□ -0.48
BRCA1-225ENST00000586385 GSRP00390 522 aa12.04□□□□□ -0.48
BRCA1-225ENST00000586385 ANXA6P08133 673 aa12.04□□□□□ -0.48
BRCA1-225ENST00000586385 HGFP14210 728 aa12.04□□□□□ -0.48
BRCA1-225ENST00000586385 TIMP2P16035 220 aa12.04□□□□□ -0.48
BRCA1-225ENST00000586385 SLC5A2P31639 672 aa12.04□□□□□ -0.48
BRCA1-225ENST00000586385 ADRA1BP35368 520 aa12.04□□□□□ -0.48
BRCA1-225ENST00000586385 UGT1A5P35504 534 aa12.04□□□□□ -0.48
BRCA1-225ENST00000586385 THOP1P52888 689 aa12.04□□□□□ -0.48
BRCA1-225ENST00000586385 NOMO3P69849 1222 aa12.04□□□□□ -0.48
BRCA1-225ENST00000586385 CCL7P80098 99 aa12.04□□□□□ -0.48
BRCA1-225ENST00000586385 ATP11AP98196 1134 aa12.04□□□□□ -0.48
BRCA1-225ENST00000586385 NRG1Q02297 640 aaPredicted RBP12.04□□□□□ -0.48
BRCA1-225ENST00000586385 SPIDRQ14159 915 aa12.04□□□□□ -0.48
BRCA1-225ENST00000586385 IRF4Q15306 451 aa12.04□□□□□ -0.48
BRCA1-225ENST00000586385 C15orf59Q2T9L4 293 aaPredicted RBP12.04□□□□□ -0.48
BRCA1-225ENST00000586385 ALG11Q2TAA5 492 aa12.04□□□□□ -0.48
BRCA1-225ENST00000586385 ZSCAN23Q3MJ62 389 aa12.04□□□□□ -0.48
BRCA1-225ENST00000586385 ACBD5Q5T8D3 534 aaPredicted RBP12.04□□□□□ -0.48
BRCA1-225ENST00000586385 CREBRFQ8IUR6 639 aa12.04□□□□□ -0.48
BRCA1-225ENST00000586385 SFTPA2Q8IWL1 248 aa12.04□□□□□ -0.48
BRCA1-225ENST00000586385 RYBPQ8N488 228 aaPredicted RBP12.04□□□□□ -0.48
BRCA1-225ENST00000586385 ARL14Q8N4G2 192 aa12.04□□□□□ -0.48
BRCA1-225ENST00000586385 CCDC74AQ96AQ1 378 aa12.04□□□□□ -0.48
BRCA1-225ENST00000586385 CCDC97Q96F63 343 aaPredicted RBP12.04□□□□□ -0.48
BRCA1-225ENST00000586385 EPAS1Q99814 870 aa12.04□□□□□ -0.48
BRCA1-225ENST00000586385 FOXP3Q9BZS1 431 aa12.04□□□□□ -0.48
BRCA1-225ENST00000586385 TMEM248Q9NWD8 314 aa12.04□□□□□ -0.48
BRCA1-225ENST00000586385 OR12D3Q9UGF7 316 aa12.04□□□□□ -0.48
BRCA1-225ENST00000586385 DNAI1Q9UI46 699 aa12.04□□□□□ -0.48
BRCA1-225ENST00000586385 ACSL6Q9UKU0 697 aa12.04□□□□□ -0.48
BRCA1-225ENST00000586385 PAXBP1Q9Y5B6 917 aa12.04□□□□□ -0.48
BRCA1-225ENST00000586385 PCDHGA7Q9Y5G6 932 aa12.04□□□□□ -0.48
BRCA1-225ENST00000586385 PLD2O14939 933 aa12.03□□□□□ -0.48
BRCA1-225ENST00000586385 INSIG1O15503 277 aa12.03□□□□□ -0.48
BRCA1-225ENST00000586385 TMCC1O94876 653 aa12.03□□□□□ -0.48
BRCA1-225ENST00000586385 LRIG2O94898 1065 aa12.03□□□□□ -0.48
BRCA1-225ENST00000586385 GJB6O95452 261 aa12.03□□□□□ -0.48
BRCA1-225ENST00000586385 POP4O95707 220 aaKnown RBP12.03□□□□□ -0.48
BRCA1-225ENST00000586385 RHOQP17081 205 aa12.03□□□□□ -0.48
BRCA1-225ENST00000586385 ITGB6P18564 788 aa12.03□□□□□ -0.48
BRCA1-225ENST00000586385 WT1P19544 449 aaPredicted RBP12.03□□□□□ -0.48
BRCA1-225ENST00000586385 MAPKAPK2P49137 400 aa12.03□□□□□ -0.48
BRCA1-225ENST00000586385 RPIAP49247 311 aa12.03□□□□□ -0.48
BRCA1-225ENST00000586385 YPEL5P62699 121 aa12.03□□□□□ -0.48
BRCA1-225ENST00000586385 NFKB2Q00653 900 aa12.03□□□□□ -0.48
BRCA1-225ENST00000586385 PPARDQ03181 441 aa12.03□□□□□ -0.48
BRCA1-225ENST00000586385 KCNC4Q03721 635 aa12.03□□□□□ -0.48
BRCA1-225ENST00000586385 PTK2BQ14289 1009 aa12.03□□□□□ -0.48
BRCA1-225ENST00000586385 KLHL40Q2TBA0 621 aa12.03□□□□□ -0.48
BRCA1-225ENST00000586385 WSCD2Q2TBF2 565 aa12.03□□□□□ -0.48
BRCA1-225ENST00000586385 CCDC14Q49A88 953 aa12.03□□□□□ -0.48
BRCA1-225ENST00000586385 FAXCQ5TGI0 409 aa12.03□□□□□ -0.48
BRCA1-225ENST00000586385 NAA35Q5VZE5 725 aa12.03□□□□□ -0.48
BRCA1-225ENST00000586385 GDPD4Q6W3E5 623 aa12.03□□□□□ -0.48
BRCA1-225ENST00000586385 ARCQ7LC44 396 aa12.03□□□□□ -0.48
BRCA1-225ENST00000586385 SDR16C5Q8N3Y7 309 aa12.03□□□□□ -0.48
BRCA1-225ENST00000586385 ARL10Q8N8L6 244 aa12.03□□□□□ -0.48
BRCA1-225ENST00000586385 CPA5Q8WXQ8 436 aa12.03□□□□□ -0.48
BRCA1-225ENST00000586385 TSACCQ96A04 125 aaPredicted RBP12.03□□□□□ -0.48
BRCA1-225ENST00000586385 WRAP53Q9BUR4 548 aaKnown RBP12.03□□□□□ -0.48
BRCA1-225ENST00000586385 SLC13A1Q9BZW2 595 aa12.03□□□□□ -0.48
BRCA1-225ENST00000586385 TRIM4Q9C037 500 aa12.03□□□□□ -0.48
BRCA1-225ENST00000586385 SYNDIG1Q9H7V2 258 aa12.03□□□□□ -0.48
BRCA1-225ENST00000586385 METTL5Q9NRN9 209 aaKnown RBP12.03□□□□□ -0.48
BRCA1-225ENST00000586385 SIRPGQ9P1W8 387 aa12.03□□□□□ -0.48
BRCA1-225ENST00000586385 COQ6Q9Y2Z9 468 aa12.03□□□□□ -0.48
BRCA1-225ENST00000586385 CHD5Q8TDI0 1954 aa12.02□□□□□ -0.49
BRCA1-225ENST00000586385 TERTO14746 1132 aaKnown RBP12.02□□□□□ -0.49
BRCA1-225ENST00000586385 ARHGAP6O43182 974 aa12.02□□□□□ -0.49
BRCA1-225ENST00000586385 TM7SF2O76062 418 aa12.02□□□□□ -0.49
BRCA1-225ENST00000586385 LSM8O95777 96 aaKnown RBP12.02□□□□□ -0.49
BRCA1-225ENST00000586385 MMEP08473 750 aa12.02□□□□□ -0.49
BRCA1-225ENST00000586385 HK3P52790 923 aa12.02□□□□□ -0.49
BRCA1-225ENST00000586385 SNRPD1P62314 119 aaKnown RBP12.02□□□□□ -0.49
BRCA1-225ENST00000586385 NFATC3Q12968 1075 aa12.02□□□□□ -0.49
BRCA1-225ENST00000586385 TMEM52BQ4KMG9 183 aa12.02□□□□□ -0.49
BRCA1-225ENST00000586385 KLHDC7AQ5VTJ3 777 aa12.02□□□□□ -0.49
BRCA1-225ENST00000586385 RAB11FIP2Q7L804 512 aa12.02□□□□□ -0.49
BRCA1-225ENST00000586385 TMPRSS9Q7Z410 1059 aa12.02□□□□□ -0.49
BRCA1-225ENST00000586385 PHLDB2Q86SQ0 1253 aa12.02□□□□□ -0.49
BRCA1-225ENST00000586385 TTC7BQ86TV6 843 aa12.02□□□□□ -0.49
BRCA1-225ENST00000586385 FBXO39Q8N4B4 442 aa12.02□□□□□ -0.49
BRCA1-225ENST00000586385 CCDC185Q8N715 623 aa12.02□□□□□ -0.49
BRCA1-225ENST00000586385 JOSD2Q8TAC2 188 aa12.02□□□□□ -0.49
BRCA1-225ENST00000586385 WDR48Q8TAF3 677 aa12.02□□□□□ -0.49
BRCA1-225ENST00000586385 GPT2Q8TD30 523 aa12.02□□□□□ -0.49
BRCA1-225ENST00000586385 EPS8L1Q8TE68 723 aa12.02□□□□□ -0.49
BRCA1-225ENST00000586385 SLC20A1Q8WUM9 679 aa12.02□□□□□ -0.49
BRCA1-225ENST00000586385 GLMNQ92990 594 aa12.02□□□□□ -0.49
BRCA1-225ENST00000586385 OSBPL1AQ9BXW6 950 aa12.02□□□□□ -0.49
BRCA1-225ENST00000586385 MAGEH1Q9H213 219 aa12.02□□□□□ -0.49
BRCA1-225ENST00000586385 EPB41L5Q9HCM4 733 aa12.02□□□□□ -0.49
BRCA1-225ENST00000586385 KIAA1468Q9P260 1216 aa12.02□□□□□ -0.49
BRCA1-225ENST00000586385 DKK3Q9UBP4 350 aa12.02□□□□□ -0.49
BRCA1-225ENST00000586385 GULP1Q9UBP9 304 aa12.02□□□□□ -0.49
BRCA1-225ENST00000586385 LHX3Q9UBR4 397 aa12.02□□□□□ -0.49
BRCA1-225ENST00000586385 NOCTQ9UK39 431 aaKnown RBP12.02□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms