RNA–Protein interactions for RNA: ENST00000586119.1

LIG3-207, Transcript of DNA ligase 3, humanhuman

TSL 3

Gene LIG3, Length 565 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG3-207ENST00000586119 FMO1Q01740 532 aa11.78□□□□□ -0.52
LIG3-207ENST00000586119 VAC14Q08AM6 782 aa11.78□□□□□ -0.52
LIG3-207ENST00000586119 DPCR1Q3MIW9 517 aa11.78□□□□□ -0.52
LIG3-207ENST00000586119 FAXCQ5TGI0 409 aa11.78□□□□□ -0.52
LIG3-207ENST00000586119 BROXQ5VW32 411 aa11.78□□□□□ -0.52
LIG3-207ENST00000586119 CAVIN1Q6NZI2 390 aaKnown RBP11.78□□□□□ -0.52
LIG3-207ENST00000586119 GDPD4Q6W3E5 623 aa11.78□□□□□ -0.52
LIG3-207ENST00000586119 B3GNT8Q7Z7M8 397 aa11.78□□□□□ -0.52
LIG3-207ENST00000586119 SFTPA2Q8IWL1 248 aa11.78□□□□□ -0.52
LIG3-207ENST00000586119 PLPP6Q8IY26 295 aa11.78□□□□□ -0.52
LIG3-207ENST00000586119 MLKLQ8NB16 471 aa11.78□□□□□ -0.52
LIG3-207ENST00000586119 TP53I13Q8NBR0 393 aaPredicted RBP11.78□□□□□ -0.52
LIG3-207ENST00000586119 TSACCQ96A04 125 aaPredicted RBP11.78□□□□□ -0.52
LIG3-207ENST00000586119 ISG20Q96AZ6 181 aaKnown RBP11.78□□□□□ -0.52
LIG3-207ENST00000586119 PCDHB18PQ96TA0 734 aa11.78□□□□□ -0.52
LIG3-207ENST00000586119 CCDC3Q9BQI4 270 aa11.78□□□□□ -0.52
LIG3-207ENST00000586119 C11orf70Q9BRQ4 267 aa11.78□□□□□ -0.52
LIG3-207ENST00000586119 SYNDIG1Q9H7V2 258 aa11.78□□□□□ -0.52
LIG3-207ENST00000586119 USP29Q9HBJ7 922 aa11.78□□□□□ -0.52
LIG3-207ENST00000586119 TMEM248Q9NWD8 314 aa11.78□□□□□ -0.52
LIG3-207ENST00000586119 TMEM63CQ9P1W3 806 aa11.78□□□□□ -0.52
LIG3-207ENST00000586119 SIRPGQ9P1W8 387 aa11.78□□□□□ -0.52
LIG3-207ENST00000586119 SPASTQ9UBP0 616 aa11.78□□□□□ -0.52
LIG3-207ENST00000586119 GULP1Q9UBP9 304 aa11.78□□□□□ -0.52
LIG3-207ENST00000586119 APOBEC3BQ9UH17 382 aaKnown RBP11.78□□□□□ -0.52
LIG3-207ENST00000586119 DACH1Q9UI36 760 aa11.78□□□□□ -0.52
LIG3-207ENST00000586119 NOCTQ9UK39 431 aaKnown RBP11.78□□□□□ -0.52
LIG3-207ENST00000586119 PAXBP1Q9Y5B6 917 aa11.78□□□□□ -0.52
LIG3-207ENST00000586119 ARHGEF17Q96PE2 2063 aaPredicted RBP11.78□□□□□ -0.52
LIG3-207ENST00000586119 C2CD4BA6NLJ0 364 aa11.77□□□□□ -0.53
LIG3-207ENST00000586119 CDRT15L2A8MXV6 281 aa11.77□□□□□ -0.53
LIG3-207ENST00000586119 F8VZ95 297 aa11.77□□□□□ -0.53
LIG3-207ENST00000586119 TPP1O14773 563 aa11.77□□□□□ -0.53
LIG3-207ENST00000586119 EPHB6O15197 1021 aa11.77□□□□□ -0.53
LIG3-207ENST00000586119 BUB1O43683 1085 aa11.77□□□□□ -0.53
LIG3-207ENST00000586119 KDELR3O43731 214 aa11.77□□□□□ -0.53
LIG3-207ENST00000586119 LZTS3O60299 673 aaPredicted RBP11.77□□□□□ -0.53
LIG3-207ENST00000586119 TNFSF15O95150 251 aa11.77□□□□□ -0.53
LIG3-207ENST00000586119 GSRP00390 522 aa11.77□□□□□ -0.53
LIG3-207ENST00000586119 CYP1A1P04798 512 aaPredicted RBP11.77□□□□□ -0.53
LIG3-207ENST00000586119 PRKCGP05129 697 aa11.77□□□□□ -0.53
LIG3-207ENST00000586119 PLEKP08567 350 aaPredicted RBP11.77□□□□□ -0.53
LIG3-207ENST00000586119 THOP1P52888 689 aa11.77□□□□□ -0.53
LIG3-207ENST00000586119 HDAC4P56524 1084 aa11.77□□□□□ -0.53
LIG3-207ENST00000586119 SNRPD1P62314 119 aaKnown RBP11.77□□□□□ -0.53
LIG3-207ENST00000586119 CCL7P80098 99 aa11.77□□□□□ -0.53
LIG3-207ENST00000586119 RHDQ02161 417 aa11.77□□□□□ -0.53
LIG3-207ENST00000586119 PTP4A2Q12974 167 aa11.77□□□□□ -0.53
LIG3-207ENST00000586119 POLD3Q15054 466 aaPredicted RBP11.77□□□□□ -0.53
LIG3-207ENST00000586119 CYTH1Q15438 398 aa11.77□□□□□ -0.53
LIG3-207ENST00000586119 SASS6Q6UVJ0 657 aa11.77□□□□□ -0.53
LIG3-207ENST00000586119 RBM44Q6ZP01 1051 aaKnown RBP11.77□□□□□ -0.53
LIG3-207ENST00000586119 RD3Q7Z3Z2 195 aa11.77□□□□□ -0.53
LIG3-207ENST00000586119 ASB12Q8WXK4 309 aa11.77□□□□□ -0.53
LIG3-207ENST00000586119 RAB7BQ96AH8 199 aa11.77□□□□□ -0.53
LIG3-207ENST00000586119 EXOC2Q96KP1 924 aa11.77□□□□□ -0.53
LIG3-207ENST00000586119 EPAS1Q99814 870 aa11.77□□□□□ -0.53
LIG3-207ENST00000586119 STK33Q9BYT3 514 aa11.77□□□□□ -0.53
LIG3-207ENST00000586119 GANQ9H2C0 597 aa11.77□□□□□ -0.53
LIG3-207ENST00000586119 THSD1Q9NS62 852 aa11.77□□□□□ -0.53
LIG3-207ENST00000586119 WDR70Q9NW82 654 aa11.77□□□□□ -0.53
LIG3-207ENST00000586119 TAB2Q9NYJ8 693 aa11.77□□□□□ -0.53
LIG3-207ENST00000586119 PADI4Q9UM07 663 aa11.77□□□□□ -0.53
LIG3-207ENST00000586119 LRP4O75096 1905 aa11.77□□□□□ -0.53
LIG3-207ENST00000586119 SCN8AQ9UQD0 1980 aa11.77□□□□□ -0.53
LIG3-207ENST00000586119 LMO7DNF2Z398 122 aa11.76□□□□□ -0.53
LIG3-207ENST00000586119 J3QKU1 62 aa11.76□□□□□ -0.53
LIG3-207ENST00000586119 TM7SF2O76062 418 aa11.76□□□□□ -0.53
LIG3-207ENST00000586119 TMCC1O94876 653 aa11.76□□□□□ -0.53
LIG3-207ENST00000586119 PIGNO95427 931 aa11.76□□□□□ -0.53
LIG3-207ENST00000586119 LSM8O95777 96 aaKnown RBP11.76□□□□□ -0.53
LIG3-207ENST00000586119 ANXA6P08133 673 aa11.76□□□□□ -0.53
LIG3-207ENST00000586119 HGFP14210 728 aa11.76□□□□□ -0.53
LIG3-207ENST00000586119 MMP8P22894 467 aa11.76□□□□□ -0.53
LIG3-207ENST00000586119 RFC1P35251 1148 aaPredicted RBP11.76□□□□□ -0.53
LIG3-207ENST00000586119 MAPKAPK2P49137 400 aa11.76□□□□□ -0.53
LIG3-207ENST00000586119 NRG1Q02297 640 aaPredicted RBP11.76□□□□□ -0.53
LIG3-207ENST00000586119 PPARDQ03181 441 aa11.76□□□□□ -0.53
LIG3-207ENST00000586119 CLN3Q13286 438 aa11.76□□□□□ -0.53
LIG3-207ENST00000586119 IRF4Q15306 451 aa11.76□□□□□ -0.53
LIG3-207ENST00000586119 TGIF1Q15583 401 aa11.76□□□□□ -0.53
LIG3-207ENST00000586119 WSCD2Q2TBF2 565 aa11.76□□□□□ -0.53
LIG3-207ENST00000586119 ZSCAN23Q3MJ62 389 aa11.76□□□□□ -0.53
LIG3-207ENST00000586119 C6orf132Q5T0Z8 1188 aa11.76□□□□□ -0.53
LIG3-207ENST00000586119 ARCQ7LC44 396 aa11.76□□□□□ -0.53
LIG3-207ENST00000586119 ZNF354CQ86Y25 554 aa11.76□□□□□ -0.53
LIG3-207ENST00000586119 HID1Q8IV36 788 aa11.76□□□□□ -0.53
LIG3-207ENST00000586119 DENND6BQ8NEG7 585 aa11.76□□□□□ -0.53
LIG3-207ENST00000586119 FAM172AQ8WUF8 416 aa11.76□□□□□ -0.53
LIG3-207ENST00000586119 CENPIQ92674 756 aaPredicted RBP11.76□□□□□ -0.53
LIG3-207ENST00000586119 TBC1D31Q96DN5 1066 aa11.76□□□□□ -0.53
LIG3-207ENST00000586119 DPH1Q9BZG8 443 aa11.76□□□□□ -0.53
LIG3-207ENST00000586119 FOXP3Q9BZS1 431 aa11.76□□□□□ -0.53
LIG3-207ENST00000586119 TTYH3Q9C0H2 523 aa11.76□□□□□ -0.53
LIG3-207ENST00000586119 MAGEH1Q9H213 219 aa11.76□□□□□ -0.53
LIG3-207ENST00000586119 NLRC4Q9NPP4 1024 aa11.76□□□□□ -0.53
LIG3-207ENST00000586119 ANO10Q9NW15 660 aa11.76□□□□□ -0.53
LIG3-207ENST00000586119 AHCTF1Q8WYP5 2266 aa11.76□□□□□ -0.53
LIG3-207ENST00000586119 TENM4Q6N022 2769 aa11.76□□□□□ -0.53
LIG3-207ENST00000586119 PIEZO2Q9H5I5 2752 aa11.75□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms