RNA–Protein interactions for RNA: ENST00000581003.5

CBX1-206, Transcript of chromobox 1, humanhuman

TSL 3

Gene CBX1, Length 812 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX1-206ENST00000581003 TMEM253P0C7T8 217 aa12.72□□□□□ -0.37
CBX1-206ENST00000581003 HNRNPA2B1P22626 353 aaKnown RBP12.72□□□□□ -0.37
CBX1-206ENST00000581003 SHC2P98077 582 aa12.72□□□□□ -0.37
CBX1-206ENST00000581003 IL10RBQ08334 325 aa12.72□□□□□ -0.37
CBX1-206ENST00000581003 DNAJC3Q13217 504 aa12.72□□□□□ -0.37
CBX1-206ENST00000581003 KRT81Q14533 505 aa12.72□□□□□ -0.37
CBX1-206ENST00000581003 MESDQ14696 234 aa12.72□□□□□ -0.37
CBX1-206ENST00000581003 ACAP1Q15027 740 aa12.72□□□□□ -0.37
CBX1-206ENST00000581003 BOLA3Q53S33 107 aa12.72□□□□□ -0.37
CBX1-206ENST00000581003 SARM1Q6SZW1 724 aa12.72□□□□□ -0.37
CBX1-206ENST00000581003 TMCO3Q6UWJ1 677 aa12.72□□□□□ -0.37
CBX1-206ENST00000581003 H2AFVQ71UI9 128 aa12.72□□□□□ -0.37
CBX1-206ENST00000581003 PTAR1Q7Z6K3 402 aaPredicted RBP12.72□□□□□ -0.37
CBX1-206ENST00000581003 TTC7BQ86TV6 843 aa12.72□□□□□ -0.37
CBX1-206ENST00000581003 EID2Q8N6I1 236 aa12.72□□□□□ -0.37
CBX1-206ENST00000581003 TC2NQ8N9U0 490 aa12.72□□□□□ -0.37
CBX1-206ENST00000581003 PCDH19Q8TAB3 1148 aa12.72□□□□□ -0.37
CBX1-206ENST00000581003 TEKT4Q8WW24 435 aa12.72□□□□□ -0.37
CBX1-206ENST00000581003 CASKIN2Q8WXE0 1202 aa12.72□□□□□ -0.37
CBX1-206ENST00000581003 EIF3CQ99613 913 aaKnown RBP12.72□□□□□ -0.37
CBX1-206ENST00000581003 NCAPGQ9BPX3 1015 aa12.72□□□□□ -0.37
CBX1-206ENST00000581003 CINPQ9BW66 212 aaPredicted RBP12.72□□□□□ -0.37
CBX1-206ENST00000581003 TMEM121BQ9BXQ6 578 aaPredicted RBP12.72□□□□□ -0.37
CBX1-206ENST00000581003 TRIM5Q9C035 493 aa12.72□□□□□ -0.37
CBX1-206ENST00000581003 GOLPH3Q9H4A6 298 aa12.72□□□□□ -0.37
CBX1-206ENST00000581003 MBNL1Q9NR56 388 aaKnown RBP12.72□□□□□ -0.37
CBX1-206ENST00000581003 UCKL1Q9NWZ5 548 aa12.72□□□□□ -0.37
CBX1-206ENST00000581003 PNMA8BQ9ULN7 279 aaPredicted RBP12.72□□□□□ -0.37
CBX1-206ENST00000581003 PCDHGB2Q9Y5G2 931 aa12.72□□□□□ -0.37
CBX1-206ENST00000581003 CNOT1A5YKK6 2376 aaKnown RBP12.72□□□□□ -0.37
CBX1-206ENST00000581003 SSU72P8A0A1W2PR75 194 aa12.71□□□□□ -0.37
CBX1-206ENST00000581003 AKR1B15C9JRZ8 316 aaPredicted RBP12.71□□□□□ -0.37
CBX1-206ENST00000581003 NEMP1O14524 444 aa12.71□□□□□ -0.37
CBX1-206ENST00000581003 AP1G1O43747 822 aa12.71□□□□□ -0.37
CBX1-206ENST00000581003 PCDHGA12O60330 932 aa12.71□□□□□ -0.37
CBX1-206ENST00000581003 MAFKO60675 156 aa12.71□□□□□ -0.37
CBX1-206ENST00000581003 MYF5P13349 255 aa12.71□□□□□ -0.37
CBX1-206ENST00000581003 AKT2P31751 481 aa12.71□□□□□ -0.37
CBX1-206ENST00000581003 IGFALSP35858 605 aa12.71□□□□□ -0.37
CBX1-206ENST00000581003 ARL4AP40617 200 aa12.71□□□□□ -0.37
CBX1-206ENST00000581003 MAXP61244 160 aa12.71□□□□□ -0.37
CBX1-206ENST00000581003 RPS21P63220 83 aaKnown RBP12.71□□□□□ -0.37
CBX1-206ENST00000581003 NCBP2-AS2Q69YL0 99 aa12.71□□□□□ -0.37
CBX1-206ENST00000581003 KIAA1161Q6NSJ0 714 aa12.71□□□□□ -0.37
CBX1-206ENST00000581003 NEK5Q6P3R8 708 aa12.71□□□□□ -0.37
CBX1-206ENST00000581003 Q6ZSR6 202 aa12.71□□□□□ -0.37
CBX1-206ENST00000581003 ABI3BPQ7Z7G0 1075 aa12.71□□□□□ -0.37
CBX1-206ENST00000581003 SRLQ86TD4 932 aa12.71□□□□□ -0.37
CBX1-206ENST00000581003 SLC35G2Q8TBE7 412 aa12.71□□□□□ -0.37
CBX1-206ENST00000581003 FAM71BQ8TC56 605 aa12.71□□□□□ -0.37
CBX1-206ENST00000581003 RAPGEF5Q92565 580 aa12.71□□□□□ -0.37
CBX1-206ENST00000581003 FUBP1Q96AE4 644 aaKnown RBP12.71□□□□□ -0.37
CBX1-206ENST00000581003 KLHDC7BQ96G42 594 aa12.71□□□□□ -0.37
CBX1-206ENST00000581003 LRIG1Q96JA1 1093 aa12.71□□□□□ -0.37
CBX1-206ENST00000581003 SMIM14Q96QK8 99 aa12.71□□□□□ -0.37
CBX1-206ENST00000581003 C1QTNF2Q9BXJ5 285 aa12.71□□□□□ -0.37
CBX1-206ENST00000581003 OSBPL1AQ9BXW6 950 aa12.71□□□□□ -0.37
CBX1-206ENST00000581003 PCDH12Q9NPG4 1184 aa12.71□□□□□ -0.37
CBX1-206ENST00000581003 KLF15Q9UIH9 416 aa12.71□□□□□ -0.37
CBX1-206ENST00000581003 PCDHB9Q9Y5E1 797 aa12.71□□□□□ -0.37
CBX1-206ENST00000581003 ZFHX4Q86UP3 3567 aa12.7□□□□□ -0.38
CBX1-206ENST00000581003 A0A0U1RQS6 177 aa12.7□□□□□ -0.38
CBX1-206ENST00000581003 TSPAN11A1L157 253 aa12.7□□□□□ -0.38
CBX1-206ENST00000581003 A8MX80 341 aa12.7□□□□□ -0.38
CBX1-206ENST00000581003 TRIM38O00635 465 aa12.7□□□□□ -0.38
CBX1-206ENST00000581003 TSPAN6O43657 245 aa12.7□□□□□ -0.38
CBX1-206ENST00000581003 ITGAVP06756 1048 aa12.7□□□□□ -0.38
CBX1-206ENST00000581003 GRK6P43250 576 aa12.7□□□□□ -0.38
CBX1-206ENST00000581003 ZNF75DP51815 510 aa12.7□□□□□ -0.38
CBX1-206ENST00000581003 GBE1Q04446 702 aa12.7□□□□□ -0.38
CBX1-206ENST00000581003 FZD2Q14332 565 aa12.7□□□□□ -0.38
CBX1-206ENST00000581003 IHHQ14623 411 aa12.7□□□□□ -0.38
CBX1-206ENST00000581003 LBRQ14739 615 aaKnown RBP12.7□□□□□ -0.38
CBX1-206ENST00000581003 SLC45A4Q5BKX6 768 aa12.7□□□□□ -0.38
CBX1-206ENST00000581003 TMCO4Q5TGY1 634 aa12.7□□□□□ -0.38
CBX1-206ENST00000581003 KCTD16Q68DU8 428 aa12.7□□□□□ -0.38
CBX1-206ENST00000581003 RAB44Q7Z6P3 723 aaPredicted RBP12.7□□□□□ -0.38
CBX1-206ENST00000581003 IQCHQ86VS3 1027 aa12.7□□□□□ -0.38
CBX1-206ENST00000581003 SLC25A45Q8N413 288 aa12.7□□□□□ -0.38
CBX1-206ENST00000581003 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP12.7□□□□□ -0.38
CBX1-206ENST00000581003 PQLC3Q8N755 202 aa12.7□□□□□ -0.38
CBX1-206ENST00000581003 CCDC42Q96M95 316 aa12.7□□□□□ -0.38
CBX1-206ENST00000581003 CPEB1Q9BZB8 566 aaKnown RBP12.7□□□□□ -0.38
CBX1-206ENST00000581003 TCEAL2Q9H3H9 227 aaPredicted RBP12.7□□□□□ -0.38
CBX1-206ENST00000581003 SUV39H2Q9H5I1 410 aa12.7□□□□□ -0.38
CBX1-206ENST00000581003 GPR27Q9NS67 375 aa12.7□□□□□ -0.38
CBX1-206ENST00000581003 ZNHIT6Q9NWK9 470 aaKnown RBP12.7□□□□□ -0.38
CBX1-206ENST00000581003 UVRAGQ9P2Y5 699 aa12.7□□□□□ -0.38
CBX1-206ENST00000581003 FAM149AA5PLN7 773 aa12.69□□□□□ -0.38
CBX1-206ENST00000581003 A6NNZ2 444 aa12.69□□□□□ -0.38
CBX1-206ENST00000581003 FFAR2O15552 330 aa12.69□□□□□ -0.38
CBX1-206ENST00000581003 TPM1P09493 284 aa12.69□□□□□ -0.38
CBX1-206ENST00000581003 GIMD1P0DJR0 217 aa12.69□□□□□ -0.38
CBX1-206ENST00000581003 C6P13671 934 aa12.69□□□□□ -0.38
CBX1-206ENST00000581003 TNNT1P13805 278 aa12.69□□□□□ -0.38
CBX1-206ENST00000581003 MMP12P39900 470 aa12.69□□□□□ -0.38
CBX1-206ENST00000581003 SCNN1BP51168 640 aa12.69□□□□□ -0.38
CBX1-206ENST00000581003 SLC10A2Q12908 348 aaPredicted RBP12.69□□□□□ -0.38
CBX1-206ENST00000581003 RALGDSQ12967 914 aa12.69□□□□□ -0.38
CBX1-206ENST00000581003 IRF4Q15306 451 aa12.69□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 34.6 ms