RNA–Protein interactions for RNA: ENST00000580218.5

DHX40-208, Transcript of DEAH-box helicase 40, human

TSL 5

Gene DHX40, Length 814 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

Download Table

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
DHX40-208	ENST00000580218	TRAF2	Q12933	501 aa		13.57	□□□□□ -0.24
DHX40-208	ENST00000580218	HNRNPD	Q14103	355 aa	Known RBP	13.57	□□□□□ -0.24
DHX40-208	ENST00000580218	IFI16	Q16666	785 aa	Known RBP	13.57	□□□□□ -0.24
DHX40-208	ENST00000580218	TRIM61	Q5EBN2	209 aa		13.57	□□□□□ -0.24
DHX40-208	ENST00000580218	TFDP3	Q5H9I0	405 aa		13.57	□□□□□ -0.24
DHX40-208	ENST00000580218	SEL1L3	Q68CR1	1132 aa		13.57	□□□□□ -0.24
DHX40-208	ENST00000580218	BBS12	Q6ZW61	710 aa		13.57	□□□□□ -0.24
DHX40-208	ENST00000580218	B4GALNT4	Q76KP1	1039 aa		13.57	□□□□□ -0.24
DHX40-208	ENST00000580218	SRL	Q86TD4	932 aa		13.57	□□□□□ -0.24
DHX40-208	ENST00000580218	TMEM145	Q8NBT3	493 aa		13.57	□□□□□ -0.24
DHX40-208	ENST00000580218	KIAA1524	Q8TCG1	905 aa		13.57	□□□□□ -0.24
DHX40-208	ENST00000580218	GANC	Q8TET4	914 aa		13.57	□□□□□ -0.24
DHX40-208	ENST00000580218	SLC6A18	Q96N87	628 aa		13.57	□□□□□ -0.24
DHX40-208	ENST00000580218	NUDCD1	Q96RS6	583 aa		13.57	□□□□□ -0.24
DHX40-208	ENST00000580218	TUBGCP5	Q96RT8	1024 aa		13.57	□□□□□ -0.24
DHX40-208	ENST00000580218	IL12RB2	Q99665	862 aa		13.57	□□□□□ -0.24
DHX40-208	ENST00000580218	HINFP	Q9BQA5	517 aa		13.57	□□□□□ -0.24
DHX40-208	ENST00000580218	NOD2	Q9HC29	1040 aa		13.57	□□□□□ -0.24
DHX40-208	ENST00000580218	PREB	Q9HCU5	417 aa		13.57	□□□□□ -0.24
DHX40-208	ENST00000580218	CNOT1	A5YKK6	2376 aa	Known RBP	13.56	□□□□□ -0.24
DHX40-208	ENST00000580218	CCDC66	A2RUB6	948 aa		13.56	□□□□□ -0.24
DHX40-208	ENST00000580218	FAM47DP	A6NHR8	397 aa		13.56	□□□□□ -0.24
DHX40-208	ENST00000580218	LRRC72	A6NJI9	287 aa		13.56	□□□□□ -0.24
DHX40-208	ENST00000580218	KCNK1	O00180	336 aa		13.56	□□□□□ -0.24
DHX40-208	ENST00000580218	FZD6	O60353	706 aa		13.56	□□□□□ -0.24
DHX40-208	ENST00000580218	CST8	O60676	142 aa		13.56	□□□□□ -0.24
DHX40-208	ENST00000580218	ZRANB2	O95218	330 aa	Known RBP eCLIP	13.56	□□□□□ -0.24
DHX40-208	ENST00000580218	MMP2	P08253	660 aa		13.56	□□□□□ -0.24
DHX40-208	ENST00000580218	SERPINF2	P08697	491 aa		13.56	□□□□□ -0.24
DHX40-208	ENST00000580218	GM2A	P17900	193 aa		13.56	□□□□□ -0.24
DHX40-208	ENST00000580218	MMP13	P45452	471 aa		13.56	□□□□□ -0.24
DHX40-208	ENST00000580218	AP1S1	P61966	158 aa		13.56	□□□□□ -0.24
DHX40-208	ENST00000580218	NIPAL4	Q0D2K0	466 aa		13.56	□□□□□ -0.24
DHX40-208	ENST00000580218	RALGDS	Q12967	914 aa		13.56	□□□□□ -0.24
DHX40-208	ENST00000580218	KLF1	Q13351	362 aa	Predicted RBP	13.56	□□□□□ -0.24
DHX40-208	ENST00000580218	WDR45B	Q5MNZ6	344 aa		13.56	□□□□□ -0.24
DHX40-208	ENST00000580218	KDM7A	Q6ZMT4	941 aa		13.56	□□□□□ -0.24
DHX40-208	ENST00000580218	RFX6	Q8HWS3	928 aa		13.56	□□□□□ -0.24
DHX40-208	ENST00000580218	RYBP	Q8N488	228 aa	Predicted RBP	13.56	□□□□□ -0.24
DHX40-208	ENST00000580218	RNF10	Q8N5U6	811 aa	Known RBP	13.56	□□□□□ -0.24
DHX40-208	ENST00000580218	OR2I1P	Q8NGU4	316 aa		13.56	□□□□□ -0.24
DHX40-208	ENST00000580218	PPP1R16A	Q96I34	528 aa		13.56	□□□□□ -0.24
DHX40-208	ENST00000580218	KLF6	Q99612	283 aa	Predicted RBP	13.56	□□□□□ -0.24
DHX40-208	ENST00000580218	ATP8A1	Q9Y2Q0	1164 aa		13.56	□□□□□ -0.24
DHX40-208	ENST00000580218	PPP2R2C	Q9Y2T4	447 aa		13.56	□□□□□ -0.24
DHX40-208	ENST00000580218	HEY1	Q9Y5J3	304 aa		13.56	□□□□□ -0.24
DHX40-208	ENST00000580218	MYLK	Q15746	1914 aa		13.55	□□□□□ -0.24
DHX40-208	ENST00000580218		A0A1W2PQU0	124 aa		13.55	□□□□□ -0.24
DHX40-208	ENST00000580218	TM4SF5	O14894	197 aa		13.55	□□□□□ -0.24
DHX40-208	ENST00000580218	RAD51B	O15315	384 aa		13.55	□□□□□ -0.24
DHX40-208	ENST00000580218	BCAT2	O15382	392 aa	Predicted RBP	13.55	□□□□□ -0.24
DHX40-208	ENST00000580218	RNGTT	O60942	597 aa	Known RBP	13.55	□□□□□ -0.24
DHX40-208	ENST00000580218	CCDC175	P0C221	793 aa		13.55	□□□□□ -0.24
DHX40-208	ENST00000580218	ENG	P17813	658 aa		13.55	□□□□□ -0.24
DHX40-208	ENST00000580218	TGM2	P21980	687 aa		13.55	□□□□□ -0.24
DHX40-208	ENST00000580218	HSPA9	P38646	679 aa	Known RBP	13.55	□□□□□ -0.24
DHX40-208	ENST00000580218	MMP12	P39900	470 aa		13.55	□□□□□ -0.24
DHX40-208	ENST00000580218	LIMK1	P53667	647 aa		13.55	□□□□□ -0.24
DHX40-208	ENST00000580218	DSC2	Q02487	901 aa		13.55	□□□□□ -0.24
DHX40-208	ENST00000580218	WASHC5	Q12768	1159 aa		13.55	□□□□□ -0.24
DHX40-208	ENST00000580218	GRIK2	Q13002	908 aa		13.55	□□□□□ -0.24
DHX40-208	ENST00000580218	ZNF235	Q14590	738 aa		13.55	□□□□□ -0.24
DHX40-208	ENST00000580218	DUOXA1	Q1HG43	343 aa		13.55	□□□□□ -0.24
DHX40-208	ENST00000580218	MARC1	Q5VT66	337 aa		13.55	□□□□□ -0.24
DHX40-208	ENST00000580218	HORMAD1	Q86X24	394 aa		13.55	□□□□□ -0.24
DHX40-208	ENST00000580218	CCDC13	Q8IYE1	715 aa		13.55	□□□□□ -0.24
DHX40-208	ENST00000580218	RCOR2	Q8IZ40	523 aa		13.55	□□□□□ -0.24
DHX40-208	ENST00000580218	GPR161	Q8N6U8	529 aa	Known RBP	13.55	□□□□□ -0.24
DHX40-208	ENST00000580218	HCAR2	Q8TDS4	363 aa		13.55	□□□□□ -0.24
DHX40-208	ENST00000580218	TADA1	Q96BN2	335 aa		13.55	□□□□□ -0.24
DHX40-208	ENST00000580218	RBM41	Q96IZ5	413 aa	Known RBP	13.55	□□□□□ -0.24
DHX40-208	ENST00000580218	ZNF641	Q96N77	438 aa	Predicted RBP	13.55	□□□□□ -0.24
DHX40-208	ENST00000580218	EDEM2	Q9BV94	578 aa		13.55	□□□□□ -0.24
DHX40-208	ENST00000580218	HEMGN	Q9BXL5	484 aa		13.55	□□□□□ -0.24
DHX40-208	ENST00000580218	CEP41	Q9BYV8	373 aa		13.55	□□□□□ -0.24
DHX40-208	ENST00000580218	SUV39H2	Q9H5I1	410 aa		13.55	□□□□□ -0.24
DHX40-208	ENST00000580218	NT5M	Q9NPB1	228 aa		13.55	□□□□□ -0.24
DHX40-208	ENST00000580218	GPR27	Q9NS67	375 aa		13.55	□□□□□ -0.24
DHX40-208	ENST00000580218	CA5B	Q9Y2D0	317 aa		13.55	□□□□□ -0.24
DHX40-208	ENST00000580218	CABIN1	Q9Y6J0	2220 aa		13.55	□□□□□ -0.24
DHX40-208	ENST00000580218		A0A1B0GTW7	788 aa		13.54	□□□□□ -0.24
DHX40-208	ENST00000580218	TCRBV7S2A1N4T	A0A589	114 aa		13.54	□□□□□ -0.24
DHX40-208	ENST00000580218	UPK3BL1	B0FP48	263 aa		13.54	□□□□□ -0.24
DHX40-208	ENST00000580218	UPK3BL2	E5RIL1	263 aa		13.54	□□□□□ -0.24
DHX40-208	ENST00000580218	APOC4-APOC2	K7ER74	178 aa		13.54	□□□□□ -0.24
DHX40-208	ENST00000580218	PRL	P01236	227 aa		13.54	□□□□□ -0.24
DHX40-208	ENST00000580218	APOC2	P02655	101 aa		13.54	□□□□□ -0.24
DHX40-208	ENST00000580218	PRKCG	P05129	697 aa		13.54	□□□□□ -0.24
DHX40-208	ENST00000580218	CCNB1	P14635	433 aa		13.54	□□□□□ -0.24
DHX40-208	ENST00000580218	PRLR	P16471	622 aa		13.54	□□□□□ -0.24
DHX40-208	ENST00000580218	MX2	P20592	715 aa		13.54	□□□□□ -0.24
DHX40-208	ENST00000580218	MAT2A	P31153	395 aa	Known RBP	13.54	□□□□□ -0.24
DHX40-208	ENST00000580218	DPP6	P42658	865 aa		13.54	□□□□□ -0.24
DHX40-208	ENST00000580218	GRIA4	P48058	902 aa		13.54	□□□□□ -0.24
DHX40-208	ENST00000580218	SCNN1B	P51168	640 aa		13.54	□□□□□ -0.24
DHX40-208	ENST00000580218	COPS2	P61201	443 aa		13.54	□□□□□ -0.24
DHX40-208	ENST00000580218	LMNB2	Q03252	620 aa		13.54	□□□□□ -0.24
DHX40-208	ENST00000580218	SFSWAP	Q12872	951 aa	Known RBP	13.54	□□□□□ -0.24
DHX40-208	ENST00000580218	ZNF211	Q13398	564 aa	Predicted RBP	13.54	□□□□□ -0.24
DHX40-208	ENST00000580218	NOMO1	Q15155	1222 aa		13.54	□□□□□ -0.24

Retrieved 100 of 20,778 RNA–protein pairs in 54.3 ms