RNA–Protein interactions for RNA: ENST00000580127.5

MKS1-209, Transcript of Meckel syndrome, type 1, humanhuman

TSL 5

Gene MKS1, Length 843 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MKS1-209ENST00000580127 PTPN9P43378 593 aa18.13■□□□□ 0.49
MKS1-209ENST00000580127 NOMO3P69849 1222 aa18.13■□□□□ 0.49
MKS1-209ENST00000580127 ELP6Q0PNE2 266 aa18.13■□□□□ 0.49
MKS1-209ENST00000580127 GRM3Q14832 879 aa18.13■□□□□ 0.49
MKS1-209ENST00000580127 CT47A1Q5JQC4 288 aaPredicted RBP18.13■□□□□ 0.49
MKS1-209ENST00000580127 MIIPQ5JXC2 388 aa18.13■□□□□ 0.49
MKS1-209ENST00000580127 TRIM72Q6ZMU5 477 aa18.13■□□□□ 0.49
MKS1-209ENST00000580127 MACC1Q6ZN28 852 aa18.13■□□□□ 0.49
MKS1-209ENST00000580127 NOP9Q86U38 636 aaKnown RBP18.13■□□□□ 0.49
MKS1-209ENST00000580127 EMC1Q8N766 993 aa18.13■□□□□ 0.49
MKS1-209ENST00000580127 HCAR2Q8TDS4 363 aa18.13■□□□□ 0.49
MKS1-209ENST00000580127 NAA15Q9BXJ9 866 aaKnown RBP18.13■□□□□ 0.49
MKS1-209ENST00000580127 SYNDIG1Q9H7V2 258 aa18.13■□□□□ 0.49
MKS1-209ENST00000580127 DKK3Q9UBP4 350 aa18.13■□□□□ 0.49
MKS1-209ENST00000580127 GULP1Q9UBP9 304 aa18.13■□□□□ 0.49
MKS1-209ENST00000580127 SETXQ7Z333 2677 aaKnown RBP18.12■□□□□ 0.49
MKS1-209ENST00000580127 F8VZ95 297 aa18.12■□□□□ 0.49
MKS1-209ENST00000580127 YY2O15391 372 aa18.12■□□□□ 0.49
MKS1-209ENST00000580127 GCATO75600 419 aa18.12■□□□□ 0.49
MKS1-209ENST00000580127 KRT3P12035 628 aa18.12■□□□□ 0.49
MKS1-209ENST00000580127 C6P13671 934 aa18.12■□□□□ 0.49
MKS1-209ENST00000580127 MMP8P22894 467 aa18.12■□□□□ 0.49
MKS1-209ENST00000580127 EEF1GP26641 437 aaKnown RBP18.12■□□□□ 0.49
MKS1-209ENST00000580127 GKP32189 559 aa18.12■□□□□ 0.49
MKS1-209ENST00000580127 ABL2P42684 1182 aa18.12■□□□□ 0.49
MKS1-209ENST00000580127 YBEYP58557 167 aaPredicted RBP18.12■□□□□ 0.49
MKS1-209ENST00000580127 RHOAP61586 193 aa18.12■□□□□ 0.49
MKS1-209ENST00000580127 CDR2Q01850 454 aa18.12■□□□□ 0.49
MKS1-209ENST00000580127 EIF3IQ13347 325 aaKnown RBP18.12■□□□□ 0.49
MKS1-209ENST00000580127 C1orf61Q13536 156 aa18.12■□□□□ 0.49
MKS1-209ENST00000580127 LRRC14Q15048 493 aa18.12■□□□□ 0.49
MKS1-209ENST00000580127 CCDC14Q49A88 953 aa18.12■□□□□ 0.49
MKS1-209ENST00000580127 SLFN11Q7Z7L1 901 aa18.12■□□□□ 0.49
MKS1-209ENST00000580127 NLRP14Q86W24 1093 aa18.12■□□□□ 0.49
MKS1-209ENST00000580127 GKN2Q86XP6 184 aa18.12■□□□□ 0.49
MKS1-209ENST00000580127 NCAPGQ9BPX3 1015 aa18.12■□□□□ 0.49
MKS1-209ENST00000580127 CCDC3Q9BQI4 270 aa18.12■□□□□ 0.49
MKS1-209ENST00000580127 CPEB1Q9BZB8 566 aaKnown RBP18.12■□□□□ 0.49
MKS1-209ENST00000580127 MFHAS1Q9Y4C4 1052 aa18.12■□□□□ 0.49
MKS1-209ENST00000580127 ZNF462Q96JM2 2506 aa18.12■□□□□ 0.49
MKS1-209ENST00000580127 SMG1Q96Q15 3661 aaKnown RBP18.12■□□□□ 0.49
MKS1-209ENST00000580127 LRIG2O94898 1065 aa18.11■□□□□ 0.49
MKS1-209ENST00000580127 RASGRP1O95267 797 aa18.11■□□□□ 0.49
MKS1-209ENST00000580127 TSHRP16473 764 aa18.11■□□□□ 0.49
MKS1-209ENST00000580127 SYCP1Q15431 976 aa18.11■□□□□ 0.49
MKS1-209ENST00000580127 CFAP58Q5T655 872 aa18.11■□□□□ 0.49
MKS1-209ENST00000580127 MANEALQ5VSG8 457 aa18.11■□□□□ 0.49
MKS1-209ENST00000580127 TRNP1Q6NT89 227 aa18.11■□□□□ 0.49
MKS1-209ENST00000580127 DPY19L2P1Q6NXN4 242 aa18.11■□□□□ 0.49
MKS1-209ENST00000580127 ERAP2Q6P179 960 aa18.11■□□□□ 0.49
MKS1-209ENST00000580127 SLC35F3Q8IY50 421 aa18.11■□□□□ 0.49
MKS1-209ENST00000580127 RBFAQ8N0V3 343 aa18.11■□□□□ 0.49
MKS1-209ENST00000580127 EPS8L1Q8TE68 723 aa18.11■□□□□ 0.49
MKS1-209ENST00000580127 MED8Q96G25 268 aa18.11■□□□□ 0.49
MKS1-209ENST00000580127 EPAS1Q99814 870 aa18.11■□□□□ 0.49
MKS1-209ENST00000580127 ITM2BQ9Y287 266 aa18.11■□□□□ 0.49
MKS1-209ENST00000580127 SSUH2Q9Y2M2 353 aa18.11■□□□□ 0.49
MKS1-209ENST00000580127 DAAM1Q9Y4D1 1078 aa18.11■□□□□ 0.49
MKS1-209ENST00000580127 ACTL7AQ9Y615 435 aa18.11■□□□□ 0.49
MKS1-209ENST00000580127 CHD5Q8TDI0 1954 aa18.1■□□□□ 0.49
MKS1-209ENST00000580127 FAM170AA1A519 330 aa18.1■□□□□ 0.49
MKS1-209ENST00000580127 CDRT15L2A8MXV6 281 aa18.1■□□□□ 0.49
MKS1-209ENST00000580127 B8ZZF3 427 aa18.1■□□□□ 0.49
MKS1-209ENST00000580127 K7ENP7 123 aa18.1■□□□□ 0.49
MKS1-209ENST00000580127 GJB6O95452 261 aa18.1■□□□□ 0.49
MKS1-209ENST00000580127 ITGA2BP08514 1039 aa18.1■□□□□ 0.49
MKS1-209ENST00000580127 NSFP46459 744 aaKnown RBP18.1■□□□□ 0.49
MKS1-209ENST00000580127 HK3P52790 923 aa18.1■□□□□ 0.49
MKS1-209ENST00000580127 C15orf59Q2T9L4 293 aaPredicted RBP18.1■□□□□ 0.49
MKS1-209ENST00000580127 KLHL40Q2TBA0 621 aa18.1■□□□□ 0.49
MKS1-209ENST00000580127 HSP90AA4PQ58FG1 418 aa18.1■□□□□ 0.49
MKS1-209ENST00000580127 EFHC2Q5JST6 749 aa18.1■□□□□ 0.49
MKS1-209ENST00000580127 PERM1Q5SV97 790 aa18.1■□□□□ 0.49
MKS1-209ENST00000580127 ARTNQ5T4W7 220 aa18.1■□□□□ 0.49
MKS1-209ENST00000580127 ATXN7L2Q5T6C5 722 aaPredicted RBP18.1■□□□□ 0.49
MKS1-209ENST00000580127 INO80CQ6PI98 192 aaPredicted RBP18.1■□□□□ 0.49
MKS1-209ENST00000580127 CRTC1Q6UUV9 634 aa18.1■□□□□ 0.49
MKS1-209ENST00000580127 PCSK4Q6UW60 755 aa18.1■□□□□ 0.49
MKS1-209ENST00000580127 XKR5Q6UX68 686 aa18.1■□□□□ 0.49
MKS1-209ENST00000580127 LEKR1Q6ZMV7 388 aa18.1■□□□□ 0.49
MKS1-209ENST00000580127 HID1Q8IV36 788 aa18.1■□□□□ 0.49
MKS1-209ENST00000580127 ARL10Q8N8L6 244 aa18.1■□□□□ 0.49
MKS1-209ENST00000580127 GPT2Q8TD30 523 aa18.1■□□□□ 0.49
MKS1-209ENST00000580127 CENPIQ92674 756 aaPredicted RBP18.1■□□□□ 0.49
MKS1-209ENST00000580127 NTAN1Q96AB6 310 aa18.1■□□□□ 0.49
MKS1-209ENST00000580127 GFM1Q96RP9 751 aaKnown RBP18.1■□□□□ 0.49
MKS1-209ENST00000580127 CCNL2Q96S94 520 aaPredicted RBP18.1■□□□□ 0.49
MKS1-209ENST00000580127 WRAP53Q9BUR4 548 aaKnown RBP18.1■□□□□ 0.49
MKS1-209ENST00000580127 LRRC61Q9BV99 259 aa18.1■□□□□ 0.49
MKS1-209ENST00000580127 SELENOOQ9BVL4 669 aa18.1■□□□□ 0.49
MKS1-209ENST00000580127 CATSPERBQ9H7T0 1116 aa18.1■□□□□ 0.49
MKS1-209ENST00000580127 CAAP1Q9H8G2 361 aa18.1■□□□□ 0.49
MKS1-209ENST00000580127 NDFIP2Q9NV92 336 aa18.1■□□□□ 0.49
MKS1-209ENST00000580127 WDR70Q9NW82 654 aa18.1■□□□□ 0.49
MKS1-209ENST00000580127 GGT7Q9UJ14 662 aa18.1■□□□□ 0.49
MKS1-209ENST00000580127 MGAQ8IWI9 3026 aa18.1■□□□□ 0.49
MKS1-209ENST00000580127 C2CD4BA6NLJ0 364 aa18.09■□□□□ 0.49
MKS1-209ENST00000580127 GFPT2O94808 682 aa18.09■□□□□ 0.49
MKS1-209ENST00000580127 TMCC1O94876 653 aa18.09■□□□□ 0.49
MKS1-209ENST00000580127 CYP1A1P04798 512 aaPredicted RBP18.09■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms