RNA–Protein interactions for RNA: ENST00000580019.1

KPNB1-208, Transcript of karyopherin subunit beta 1, humanhuman

TSL 2

Gene KPNB1, Length 427 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KPNB1-208ENST00000580019 CACNA1IQ9P0X4 2223 aa3.25□□□□□ -1.89
KPNB1-208ENST00000580019 VWDEQ8N2E2 1590 aa3.25□□□□□ -1.89
KPNB1-208ENST00000580019 CLSPNQ9HAW4 1339 aa3.25□□□□□ -1.89
KPNB1-208ENST00000580019 SUPT6HQ7KZ85 1726 aaKnown RBP3.25□□□□□ -1.89
KPNB1-208ENST00000580019 LOC100509620A0A075B734 347 aa3.25□□□□□ -1.89
KPNB1-208ENST00000580019 TBC1D3DA0A087WVF3 549 aa3.25□□□□□ -1.89
KPNB1-208ENST00000580019 TBC1D3IA0A087WXS9 549 aa3.25□□□□□ -1.89
KPNB1-208ENST00000580019 TBC1D3EA0A087X179 549 aa3.25□□□□□ -1.89
KPNB1-208ENST00000580019 TBC1D3KA0A087X1G2 549 aa3.25□□□□□ -1.89
KPNB1-208ENST00000580019 TEX13CA0A0J9YWL9 993 aa3.25□□□□□ -1.89
KPNB1-208ENST00000580019 A0A1W2PQM1 296 aa3.25□□□□□ -1.89
KPNB1-208ENST00000580019 KRT87PA6NCN2 255 aa3.25□□□□□ -1.89
KPNB1-208ENST00000580019 TBC1D3BA6NDS4 549 aa3.25□□□□□ -1.89
KPNB1-208ENST00000580019 TBC1D3FA6NER0 549 aaPredicted RBP3.25□□□□□ -1.89
KPNB1-208ENST00000580019 FAM90A7PA6NKC0 464 aa3.25□□□□□ -1.89
KPNB1-208ENST00000580019 FAM90A22PA8MWA6 464 aa3.25□□□□□ -1.89
KPNB1-208ENST00000580019 FAM90A12PA8MX19 464 aa3.25□□□□□ -1.89
KPNB1-208ENST00000580019 FAM90A23PA8MXZ1 464 aa3.25□□□□□ -1.89
KPNB1-208ENST00000580019 EIF3CLB5ME19 914 aaKnown RBP3.25□□□□□ -1.89
KPNB1-208ENST00000580019 TBC1D3LB9A6J9 549 aa3.25□□□□□ -1.89
KPNB1-208ENST00000580019 LEFTY2O00292 366 aa3.25□□□□□ -1.89
KPNB1-208ENST00000580019 ZNF263O14978 683 aa3.25□□□□□ -1.89
KPNB1-208ENST00000580019 CD3EAPO15446 510 aaKnown RBP3.25□□□□□ -1.89
KPNB1-208ENST00000580019 PJA2O43164 708 aa3.25□□□□□ -1.89
KPNB1-208ENST00000580019 KINO60870 393 aaKnown RBP3.25□□□□□ -1.89
KPNB1-208ENST00000580019 AGFG2O95081 481 aa3.25□□□□□ -1.89
KPNB1-208ENST00000580019 OR2C1O95371 312 aa3.25□□□□□ -1.89
KPNB1-208ENST00000580019 PRKCGP05129 697 aa3.25□□□□□ -1.89
KPNB1-208ENST00000580019 RB1P06400 928 aa3.25□□□□□ -1.89
KPNB1-208ENST00000580019 TBC1D3HP0C7X1 549 aa3.25□□□□□ -1.89
KPNB1-208ENST00000580019 SPATA31D3P0C874 917 aa3.25□□□□□ -1.89
KPNB1-208ENST00000580019 RPS2P15880 293 aaKnown RBP3.25□□□□□ -1.89
KPNB1-208ENST00000580019 ERCC2P18074 760 aa3.25□□□□□ -1.89
KPNB1-208ENST00000580019 IL10P22301 178 aa3.25□□□□□ -1.89
KPNB1-208ENST00000580019 FGFR4P22455 802 aa3.25□□□□□ -1.89
KPNB1-208ENST00000580019 CPT2P23786 658 aa3.25□□□□□ -1.89
KPNB1-208ENST00000580019 HOXC8P31273 242 aa3.25□□□□□ -1.89
KPNB1-208ENST00000580019 SLC6A4P31645 630 aa3.25□□□□□ -1.89
KPNB1-208ENST00000580019 CIITAP33076 1130 aa3.25□□□□□ -1.89
KPNB1-208ENST00000580019 PBX3P40426 434 aa3.25□□□□□ -1.89
KPNB1-208ENST00000580019 SLC15A1P46059 708 aa3.25□□□□□ -1.89
KPNB1-208ENST00000580019 PXNP49023 591 aaPredicted RBP3.25□□□□□ -1.89
KPNB1-208ENST00000580019 GATMP50440 423 aa3.25□□□□□ -1.89
KPNB1-208ENST00000580019 PGDP52209 483 aa3.25□□□□□ -1.89
KPNB1-208ENST00000580019 AKAP17AQ02040 695 aaKnown RBP3.25□□□□□ -1.89
KPNB1-208ENST00000580019 PIGFQ07326 219 aa3.25□□□□□ -1.89
KPNB1-208ENST00000580019 NIPAL4Q0D2K0 466 aa3.25□□□□□ -1.89
KPNB1-208ENST00000580019 LRRC74AQ0VAA2 488 aa3.25□□□□□ -1.89
KPNB1-208ENST00000580019 RPA4Q13156 261 aa3.25□□□□□ -1.89
KPNB1-208ENST00000580019 SNTB1Q13884 538 aaKnown RBP3.25□□□□□ -1.89
KPNB1-208ENST00000580019 RABEP1Q15276 862 aa3.25□□□□□ -1.89
KPNB1-208ENST00000580019 GSTA3Q16772 222 aa3.25□□□□□ -1.89
KPNB1-208ENST00000580019 BMT2Q1RMZ1 405 aa3.25□□□□□ -1.89
KPNB1-208ENST00000580019 C15orf59Q2T9L4 293 aaPredicted RBP3.25□□□□□ -1.89
KPNB1-208ENST00000580019 DPCR1Q3MIW9 517 aa3.25□□□□□ -1.89
KPNB1-208ENST00000580019 SLC9B1Q4ZJI4 515 aa3.25□□□□□ -1.89
KPNB1-208ENST00000580019 RUNDC3AQ59EK9 446 aa3.25□□□□□ -1.89
KPNB1-208ENST00000580019 TOR1AIP1Q5JTV8 583 aa3.25□□□□□ -1.89
KPNB1-208ENST00000580019 GLRA4Q5JXX5 417 aa3.25□□□□□ -1.89
KPNB1-208ENST00000580019 CST9LP1Q5W188 147 aa3.25□□□□□ -1.89
KPNB1-208ENST00000580019 TBC1D3GQ6DHY5 549 aa3.25□□□□□ -1.89
KPNB1-208ENST00000580019 TBC1D3CQ6IPX1 549 aa3.25□□□□□ -1.89
KPNB1-208ENST00000580019 ARMC6Q6NXE6 501 aa3.25□□□□□ -1.89
KPNB1-208ENST00000580019 MSANTD2Q6P1R3 559 aa3.25□□□□□ -1.89
KPNB1-208ENST00000580019 TRAT1Q6PIZ9 186 aa3.25□□□□□ -1.89
KPNB1-208ENST00000580019 KDELC1Q6UW63 502 aa3.25□□□□□ -1.89
KPNB1-208ENST00000580019 Q6ZTC4 211 aa3.25□□□□□ -1.89
KPNB1-208ENST00000580019 SPATA31D4Q6ZUB0 917 aa3.25□□□□□ -1.89
KPNB1-208ENST00000580019 PIK3AP1Q6ZUJ8 805 aa3.25□□□□□ -1.89
KPNB1-208ENST00000580019 ERN2Q76MJ5 926 aaKnown RBP3.25□□□□□ -1.89
KPNB1-208ENST00000580019 GSTA5Q7RTV2 222 aa3.25□□□□□ -1.89
KPNB1-208ENST00000580019 PLPPR4Q7Z2D5 763 aa3.25□□□□□ -1.89
KPNB1-208ENST00000580019 UBE3BQ7Z3V4 1068 aa3.25□□□□□ -1.89
KPNB1-208ENST00000580019 KRT27Q7Z3Y8 459 aa3.25□□□□□ -1.89
KPNB1-208ENST00000580019 ZNF280BQ86YH2 543 aa3.25□□□□□ -1.89
KPNB1-208ENST00000580019 LINC00346Q8IVM7 164 aa3.25□□□□□ -1.89
KPNB1-208ENST00000580019 ARHGAP12Q8IWW6 846 aa3.25□□□□□ -1.89
KPNB1-208ENST00000580019 TBC1D3Q8IZP1 549 aaPredicted RBP3.25□□□□□ -1.89
KPNB1-208ENST00000580019 FSTL5Q8N475 847 aaPredicted RBP3.25□□□□□ -1.89
KPNB1-208ENST00000580019 TMEM116Q8NCL8 245 aa3.25□□□□□ -1.89
KPNB1-208ENST00000580019 SUN3Q8TAQ9 357 aa3.25□□□□□ -1.89
KPNB1-208ENST00000580019 SPATA20Q8TB22 786 aa3.25□□□□□ -1.89
KPNB1-208ENST00000580019 FBXO30Q8TB52 745 aa3.25□□□□□ -1.89
KPNB1-208ENST00000580019 OVCA2Q8WZ82 227 aa3.25□□□□□ -1.89
KPNB1-208ENST00000580019 ARRDC3Q96B67 414 aa3.25□□□□□ -1.89
KPNB1-208ENST00000580019 KLHL29Q96CT2 875 aa3.25□□□□□ -1.89
KPNB1-208ENST00000580019 CEP95Q96GE4 821 aa3.25□□□□□ -1.89
KPNB1-208ENST00000580019 RBM18Q96H35 190 aaKnown RBP3.25□□□□□ -1.89
KPNB1-208ENST00000580019 PPP1R13BQ96KQ4 1090 aa3.25□□□□□ -1.89
KPNB1-208ENST00000580019 Q96MF0 132 aa3.25□□□□□ -1.89
KPNB1-208ENST00000580019 CFAP57Q96MR6 1250 aa3.25□□□□□ -1.89
KPNB1-208ENST00000580019 UROC1Q96N76 676 aa3.25□□□□□ -1.89
KPNB1-208ENST00000580019 DACH2Q96NX9 599 aa3.25□□□□□ -1.89
KPNB1-208ENST00000580019 FAM118BQ9BPY3 351 aa3.25□□□□□ -1.89
KPNB1-208ENST00000580019 NAA11Q9BSU3 229 aaPredicted RBP3.25□□□□□ -1.89
KPNB1-208ENST00000580019 EPC1Q9H2F5 836 aa3.25□□□□□ -1.89
KPNB1-208ENST00000580019 SLC32A1Q9H598 525 aa3.25□□□□□ -1.89
KPNB1-208ENST00000580019 TASP1Q9H6P5 420 aa3.25□□□□□ -1.89
KPNB1-208ENST00000580019 PDE11AQ9HCR9 933 aa3.25□□□□□ -1.89
KPNB1-208ENST00000580019 IL1RAPL2Q9NP60 686 aa3.25□□□□□ -1.89
Retrieved 100 of 20,778 RNA–protein pairs in 110.8 ms