RNA–Protein interactions for RNA: ENST00000576940.1

NPLOC4-220, Transcript of NPL4 homolog, ubiquitin recognition factor, humanhuman

TSL 5

Gene NPLOC4, Length 216 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPLOC4-220ENST00000576940 GEMIN8Q9NWZ8 242 aaKnown RBP10.26□□□□□ -0.77
NPLOC4-220ENST00000576940 ZNF212Q9UDV6 495 aa10.26□□□□□ -0.77
NPLOC4-220ENST00000576940 GPR34Q9UPC5 381 aa10.26□□□□□ -0.77
NPLOC4-220ENST00000576940 PCDHB11Q9Y5F2 797 aa10.26□□□□□ -0.77
NPLOC4-220ENST00000576940 ZFC3H1O60293 1989 aaKnown RBP10.25□□□□□ -0.77
NPLOC4-220ENST00000576940 SCN8AQ9UQD0 1980 aa10.25□□□□□ -0.77
NPLOC4-220ENST00000576940 IGLV3-10A0A075B6K4 115 aa10.25□□□□□ -0.77
NPLOC4-220ENST00000576940 KRIT1O00522 736 aa10.25□□□□□ -0.77
NPLOC4-220ENST00000576940 AREL1O15033 823 aa10.25□□□□□ -0.77
NPLOC4-220ENST00000576940 DAB1O75553 588 aa10.25□□□□□ -0.77
NPLOC4-220ENST00000576940 TM7SF2O76062 418 aa10.25□□□□□ -0.77
NPLOC4-220ENST00000576940 NTRK1P04629 796 aa10.25□□□□□ -0.77
NPLOC4-220ENST00000576940 UGT2B4P06133 528 aa10.25□□□□□ -0.77
NPLOC4-220ENST00000576940 GP1BBP13224 206 aa10.25□□□□□ -0.77
NPLOC4-220ENST00000576940 GNA12Q03113 381 aa10.25□□□□□ -0.77
NPLOC4-220ENST00000576940 DEUP1Q05D60 604 aa10.25□□□□□ -0.77
NPLOC4-220ENST00000576940 ZFP36L1Q07352 338 aaKnown RBP10.25□□□□□ -0.77
NPLOC4-220ENST00000576940 ELOCQ15369 112 aa10.25□□□□□ -0.77
NPLOC4-220ENST00000576940 KLHL40Q2TBA0 621 aa10.25□□□□□ -0.77
NPLOC4-220ENST00000576940 PTPN20Q4JDL3 420 aa10.25□□□□□ -0.77
NPLOC4-220ENST00000576940 BRMS1LQ5PSV4 323 aa10.25□□□□□ -0.77
NPLOC4-220ENST00000576940 KCTD16Q68DU8 428 aa10.25□□□□□ -0.77
NPLOC4-220ENST00000576940 KLHL10Q6JEL2 608 aa10.25□□□□□ -0.77
NPLOC4-220ENST00000576940 LVRNQ6Q4G3 990 aa10.25□□□□□ -0.77
NPLOC4-220ENST00000576940 MACC1Q6ZN28 852 aa10.25□□□□□ -0.77
NPLOC4-220ENST00000576940 TMPRSS9Q7Z410 1059 aa10.25□□□□□ -0.77
NPLOC4-220ENST00000576940 ZSCAN30Q86W11 494 aa10.25□□□□□ -0.77
NPLOC4-220ENST00000576940 HSCBQ8IWL3 235 aa10.25□□□□□ -0.77
NPLOC4-220ENST00000576940 DRC7Q8IY82 874 aa10.25□□□□□ -0.77
NPLOC4-220ENST00000576940 FSTL5Q8N475 847 aaPredicted RBP10.25□□□□□ -0.77
NPLOC4-220ENST00000576940 NETO2Q8NC67 525 aa10.25□□□□□ -0.77
NPLOC4-220ENST00000576940 DHTKD1Q96HY7 919 aaPredicted RBP10.25□□□□□ -0.77
NPLOC4-220ENST00000576940 TBCBQ99426 244 aa10.25□□□□□ -0.77
NPLOC4-220ENST00000576940 EPAS1Q99814 870 aa10.25□□□□□ -0.77
NPLOC4-220ENST00000576940 CRACR2AQ9BSW2 395 aa10.25□□□□□ -0.77
NPLOC4-220ENST00000576940 FUCA2Q9BTY2 467 aa10.25□□□□□ -0.77
NPLOC4-220ENST00000576940 WRAP53Q9BUR4 548 aaKnown RBP10.25□□□□□ -0.77
NPLOC4-220ENST00000576940 SRRTQ9BXP5 876 aaKnown RBP10.25□□□□□ -0.77
NPLOC4-220ENST00000576940 EPN3Q9H201 632 aa10.25□□□□□ -0.77
NPLOC4-220ENST00000576940 PLCB1Q9NQ66 1216 aa10.25□□□□□ -0.77
NPLOC4-220ENST00000576940 NDFIP2Q9NV92 336 aa10.25□□□□□ -0.77
NPLOC4-220ENST00000576940 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP10.25□□□□□ -0.77
NPLOC4-220ENST00000576940 COQ6Q9Y2Z9 468 aa10.25□□□□□ -0.77
NPLOC4-220ENST00000576940 RNF215Q9Y6U7 377 aa10.25□□□□□ -0.77
NPLOC4-220ENST00000576940 SPENQ96T58 3664 aaKnown RBP10.25□□□□□ -0.77
NPLOC4-220ENST00000576940 PSMA7O14818 248 aa10.24□□□□□ -0.77
NPLOC4-220ENST00000576940 ALPIP09923 528 aa10.24□□□□□ -0.77
NPLOC4-220ENST00000576940 CCL4P13236 92 aa10.24□□□□□ -0.77
NPLOC4-220ENST00000576940 SLC9A1P19634 815 aa10.24□□□□□ -0.77
NPLOC4-220ENST00000576940 CR2P20023 1033 aa10.24□□□□□ -0.77
NPLOC4-220ENST00000576940 BLKP51451 505 aa10.24□□□□□ -0.77
NPLOC4-220ENST00000576940 STX17P56962 302 aa10.24□□□□□ -0.77
NPLOC4-220ENST00000576940 MORC3Q14149 939 aa10.24□□□□□ -0.77
NPLOC4-220ENST00000576940 IRF4Q15306 451 aa10.24□□□□□ -0.77
NPLOC4-220ENST00000576940 ALG11Q2TAA5 492 aa10.24□□□□□ -0.77
NPLOC4-220ENST00000576940 MYLK3Q32MK0 819 aa10.24□□□□□ -0.77
NPLOC4-220ENST00000576940 ATXN7L2Q5T6C5 722 aaPredicted RBP10.24□□□□□ -0.77
NPLOC4-220ENST00000576940 TTI2Q6NXR4 508 aa10.24□□□□□ -0.77
NPLOC4-220ENST00000576940 ZNF783Q6ZMS7 281 aa10.24□□□□□ -0.77
NPLOC4-220ENST00000576940 SLC26A9Q7LBE3 791 aa10.24□□□□□ -0.77
NPLOC4-220ENST00000576940 TRIM59Q8IWR1 403 aa10.24□□□□□ -0.77
NPLOC4-220ENST00000576940 PLPP6Q8IY26 295 aa10.24□□□□□ -0.77
NPLOC4-220ENST00000576940 FMR1NBQ8N0W7 255 aaPredicted RBP10.24□□□□□ -0.77
NPLOC4-220ENST00000576940 ZNF397Q8NF99 534 aaPredicted RBP10.24□□□□□ -0.77
NPLOC4-220ENST00000576940 GPR156Q8NFN8 814 aa10.24□□□□□ -0.77
NPLOC4-220ENST00000576940 SPATA20Q8TB22 786 aa10.24□□□□□ -0.77
NPLOC4-220ENST00000576940 CXorf40AQ8TE69 158 aa10.24□□□□□ -0.77
NPLOC4-220ENST00000576940 SMARCE1Q969G3 411 aa10.24□□□□□ -0.77
NPLOC4-220ENST00000576940 NT5C3BQ969T7 300 aa10.24□□□□□ -0.77
NPLOC4-220ENST00000576940 CCDC34Q96HJ3 373 aa10.24□□□□□ -0.77
NPLOC4-220ENST00000576940 ZYG11BQ9C0D3 744 aa10.24□□□□□ -0.77
NPLOC4-220ENST00000576940 SCAND2PQ9GZW5 306 aaPredicted RBP10.24□□□□□ -0.77
NPLOC4-220ENST00000576940 SEMA6CQ9H3T2 930 aa10.24□□□□□ -0.77
NPLOC4-220ENST00000576940 SYNCQ9H7C4 482 aa10.24□□□□□ -0.77
NPLOC4-220ENST00000576940 PCDHGC3Q9UN70 934 aa10.24□□□□□ -0.77
NPLOC4-220ENST00000576940 TEX15Q9BXT5 2789 aa10.24□□□□□ -0.77
NPLOC4-220ENST00000576940 NBASA2RRP1 2371 aa10.23□□□□□ -0.77
NPLOC4-220ENST00000576940 A0A1W2PQC6 194 aa10.23□□□□□ -0.77
NPLOC4-220ENST00000576940 PPP1R3GB7ZBB8 358 aa10.23□□□□□ -0.77
NPLOC4-220ENST00000576940 SMC2O95347 1197 aa10.23□□□□□ -0.77
NPLOC4-220ENST00000576940 POP4O95707 220 aaKnown RBP10.23□□□□□ -0.77
NPLOC4-220ENST00000576940 F9P00740 461 aa10.23□□□□□ -0.77
NPLOC4-220ENST00000576940 TIMP2P16035 220 aa10.23□□□□□ -0.77
NPLOC4-220ENST00000576940 SRP54P61011 504 aaKnown RBP10.23□□□□□ -0.77
NPLOC4-220ENST00000576940 SNRPD1P62314 119 aaKnown RBP10.23□□□□□ -0.77
NPLOC4-220ENST00000576940 STIM1Q13586 685 aa10.23□□□□□ -0.77
NPLOC4-220ENST00000576940 INPP5AQ14642 412 aa10.23□□□□□ -0.77
NPLOC4-220ENST00000576940 C16orf72Q14CZ0 275 aa10.23□□□□□ -0.77
NPLOC4-220ENST00000576940 WSCD2Q2TBF2 565 aa10.23□□□□□ -0.77
NPLOC4-220ENST00000576940 PHF19Q5T6S3 580 aa10.23□□□□□ -0.77
NPLOC4-220ENST00000576940 GDPD4Q6W3E5 623 aa10.23□□□□□ -0.77
NPLOC4-220ENST00000576940 GKN2Q86XP6 184 aa10.23□□□□□ -0.77
NPLOC4-220ENST00000576940 CCNJLQ8IV13 435 aa10.23□□□□□ -0.77
NPLOC4-220ENST00000576940 OR2AP1Q8NGE2 309 aa10.23□□□□□ -0.77
NPLOC4-220ENST00000576940 ZNF564Q8TBZ8 553 aaPredicted RBP10.23□□□□□ -0.77
NPLOC4-220ENST00000576940 NELFBQ8WX92 580 aa10.23□□□□□ -0.77
NPLOC4-220ENST00000576940 ARHGEF2Q92974 986 aaKnown RBP10.23□□□□□ -0.77
NPLOC4-220ENST00000576940 ISG20Q96AZ6 181 aaKnown RBP10.23□□□□□ -0.77
NPLOC4-220ENST00000576940 ARHGEF26Q96DR7 871 aa10.23□□□□□ -0.77
NPLOC4-220ENST00000576940 PGAP3Q96FM1 320 aaPredicted RBP10.23□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 77.4 ms