RNA–Protein interactions for RNA: ENST00000574428.5

ATPAF1-213, Transcript of ATP synthase mitochondrial F1 complex assembly factor 1, humanhuman

TSL 1 (best) BASIC

Gene ATPAF1, Length 1,760 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATPAF1-213ENST00000574428 HDXQ7Z353 690 aa24.29■■□□□ 1.48
ATPAF1-213ENST00000574428 CHST14Q8NCH0 376 aa24.29■■□□□ 1.48
ATPAF1-213ENST00000574428 ACOX2Q99424 681 aa24.29■■□□□ 1.48
ATPAF1-213ENST00000574428 TDRD1Q9BXT4 1180 aaKnown RBP24.29■■□□□ 1.48
ATPAF1-213ENST00000574428 TXLNGYQ9BZA5 131 aa24.29■■□□□ 1.48
ATPAF1-213ENST00000574428 DUSP12Q9UNI6 340 aa24.29■■□□□ 1.48
ATPAF1-213ENST00000574428 CHKBQ9Y259 395 aa24.29■■□□□ 1.48
ATPAF1-213ENST00000574428 PIGNO95427 931 aa24.28■■□□□ 1.48
ATPAF1-213ENST00000574428 EGFP01133 1207 aa24.28■■□□□ 1.48
ATPAF1-213ENST00000574428 TNFRSF4P43489 277 aa24.28■■□□□ 1.48
ATPAF1-213ENST00000574428 RECQLP46063 649 aaPredicted RBP24.28■■□□□ 1.48
ATPAF1-213ENST00000574428 CDK18Q07002 472 aa24.28■■□□□ 1.48
ATPAF1-213ENST00000574428 SLC44A4Q53GD3 710 aa24.28■■□□□ 1.48
ATPAF1-213ENST00000574428 TMEM196Q5HYL7 178 aa24.28■■□□□ 1.48
ATPAF1-213ENST00000574428 FSTL4Q6MZW2 842 aa24.28■■□□□ 1.48
ATPAF1-213ENST00000574428 CAMK1DQ8IU85 385 aa24.28■■□□□ 1.48
ATPAF1-213ENST00000574428 ANKMY2Q8IV38 441 aa24.28■■□□□ 1.48
ATPAF1-213ENST00000574428 ZBED8Q8IZ13 594 aa24.28■■□□□ 1.48
ATPAF1-213ENST00000574428 MPP5Q8N3R9 675 aa24.28■■□□□ 1.48
ATPAF1-213ENST00000574428 KDM1BQ8NB78 822 aa24.28■■□□□ 1.48
ATPAF1-213ENST00000574428 FEM1CQ96JP0 617 aa24.28■■□□□ 1.48
ATPAF1-213ENST00000574428 WDR83Q9BRX9 315 aaKnown RBP24.28■■□□□ 1.48
ATPAF1-213ENST00000574428 ZDHHC6Q9H6R6 413 aa24.28■■□□□ 1.48
ATPAF1-213ENST00000574428 THAP10Q9P2Z0 257 aaPredicted RBP24.28■■□□□ 1.48
ATPAF1-213ENST00000574428 LOC285095A0A1B0GVY8 99 aa24.27■■□□□ 1.48
ATPAF1-213ENST00000574428 WASH3PC4AMC7 463 aa24.27■■□□□ 1.48
ATPAF1-213ENST00000574428 E7ESA3 106 aa24.27■■□□□ 1.48
ATPAF1-213ENST00000574428 BMP1P13497 986 aa24.27■■□□□ 1.48
ATPAF1-213ENST00000574428 TPH1P17752 444 aa24.27■■□□□ 1.48
ATPAF1-213ENST00000574428 PRKCHP24723 683 aa24.27■■□□□ 1.48
ATPAF1-213ENST00000574428 MGAT1P26572 445 aa24.27■■□□□ 1.48
ATPAF1-213ENST00000574428 IL12RB1P42701 662 aa24.27■■□□□ 1.48
ATPAF1-213ENST00000574428 MAPK8P45983 427 aa24.27■■□□□ 1.48
ATPAF1-213ENST00000574428 CRADDP78560 199 aa24.27■■□□□ 1.48
ATPAF1-213ENST00000574428 CDH17Q12864 832 aa24.27■■□□□ 1.48
ATPAF1-213ENST00000574428 GALNT3Q14435 633 aa24.27■■□□□ 1.48
ATPAF1-213ENST00000574428 SLMAPQ14BN4 828 aa24.27■■□□□ 1.48
ATPAF1-213ENST00000574428 PDCD6IPQ8WUM4 868 aaKnown RBP24.27■■□□□ 1.48
ATPAF1-213ENST00000574428 PTPRN2Q92932 1015 aa24.27■■□□□ 1.48
ATPAF1-213ENST00000574428 VOPP1Q96AW1 172 aa24.27■■□□□ 1.48
ATPAF1-213ENST00000574428 TRIB3Q96RU7 358 aa24.27■■□□□ 1.48
ATPAF1-213ENST00000574428 TMEM245Q9H330 911 aa24.27■■□□□ 1.48
ATPAF1-213ENST00000574428 CACNA2D2Q9NY47 1150 aa24.27■■□□□ 1.48
ATPAF1-213ENST00000574428 STARD13Q9Y3M8 1113 aa24.27■■□□□ 1.48
ATPAF1-213ENST00000574428 ATXN1LP0C7T5 689 aaKnown RBP24.26■■□□□ 1.47
ATPAF1-213ENST00000574428 MAGEA4P43358 317 aa24.26■■□□□ 1.47
ATPAF1-213ENST00000574428 CASP8Q14790 479 aa24.26■■□□□ 1.47
ATPAF1-213ENST00000574428 SLC1A5Q15758 541 aa24.26■■□□□ 1.47
ATPAF1-213ENST00000574428 DNAJC21Q5F1R6 531 aaKnown RBP24.26■■□□□ 1.47
ATPAF1-213ENST00000574428 SIRPB2Q5JXA9 342 aa24.26■■□□□ 1.47
ATPAF1-213ENST00000574428 UBAP2Q5T6F2 1119 aaKnown RBP24.26■■□□□ 1.47
ATPAF1-213ENST00000574428 DENND2CQ68D51 928 aa24.26■■□□□ 1.47
ATPAF1-213ENST00000574428 CEP128Q6ZU80 1094 aa24.26■■□□□ 1.47
ATPAF1-213ENST00000574428 TPRG1Q6ZUI0 275 aa24.26■■□□□ 1.47
ATPAF1-213ENST00000574428 C9orf72Q96LT7 481 aa24.26■■□□□ 1.47
ATPAF1-213ENST00000574428 PHACTR1Q9C0D0 580 aa24.26■■□□□ 1.47
ATPAF1-213ENST00000574428 ATP13A3Q9H7F0 1226 aa24.26■■□□□ 1.47
ATPAF1-213ENST00000574428 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP24.26■■□□□ 1.47
ATPAF1-213ENST00000574428 SHISA7A6NL88 538 aa24.26■■□□□ 1.47
ATPAF1-213ENST00000574428 EIF3HO15372 352 aaKnown RBP eCLIP24.26■■□□□ 1.47
ATPAF1-213ENST00000574428 PDHA1P08559 390 aa24.26■■□□□ 1.47
ATPAF1-213ENST00000574428 GLULP15104 373 aa24.26■■□□□ 1.47
ATPAF1-213ENST00000574428 ELK3P41970 407 aa24.26■■□□□ 1.47
ATPAF1-213ENST00000574428 PMS2P54278 862 aa24.26■■□□□ 1.47
ATPAF1-213ENST00000574428 BCL2L1Q07817 233 aa24.26■■□□□ 1.47
ATPAF1-213ENST00000574428 GRSF1Q12849 480 aaKnown RBP eCLIP24.26■■□□□ 1.47
ATPAF1-213ENST00000574428 HNRNPA1L2Q32P51 320 aaKnown RBP24.26■■□□□ 1.47
ATPAF1-213ENST00000574428 CERCAMQ5T4B2 595 aa24.26■■□□□ 1.47
ATPAF1-213ENST00000574428 IGDCC3Q8IVU1 814 aa24.26■■□□□ 1.47
ATPAF1-213ENST00000574428 PLPP6Q8IY26 295 aa24.26■■□□□ 1.47
ATPAF1-213ENST00000574428 ZNF513Q8N8E2 541 aaPredicted RBP24.26■■□□□ 1.47
ATPAF1-213ENST00000574428 GRIN3AQ8TCU5 1115 aa24.26■■□□□ 1.47
ATPAF1-213ENST00000574428 CDC42EP4Q9H3Q1 356 aaKnown RBP24.26■■□□□ 1.47
ATPAF1-213ENST00000574428 SYBUQ9NX95 663 aa24.26■■□□□ 1.47
ATPAF1-213ENST00000574428 CHMP2BQ9UQN3 213 aa24.26■■□□□ 1.47
ATPAF1-213ENST00000574428 POP4O95707 220 aaKnown RBP24.25■■□□□ 1.47
ATPAF1-213ENST00000574428 PRLP01236 227 aa24.25■■□□□ 1.47
ATPAF1-213ENST00000574428 CD72P21854 359 aa24.25■■□□□ 1.47
ATPAF1-213ENST00000574428 TIE1P35590 1138 aa24.25■■□□□ 1.47
ATPAF1-213ENST00000574428 KIR2DL1P43626 348 aaPredicted RBP24.25■■□□□ 1.47
ATPAF1-213ENST00000574428 FBXO36Q8NEA4 188 aa24.25■■□□□ 1.47
ATPAF1-213ENST00000574428 ERLEC1Q96DZ1 483 aa24.25■■□□□ 1.47
ATPAF1-213ENST00000574428 SIGLEC10Q96LC7 697 aa24.25■■□□□ 1.47
ATPAF1-213ENST00000574428 SEMA4AQ9H3S1 761 aa24.25■■□□□ 1.47
ATPAF1-213ENST00000574428 SORCS3Q9UPU3 1222 aa24.25■■□□□ 1.47
ATPAF1-213ENST00000574428 ANKRD36A6QL64 1941 aa24.25■■□□□ 1.47
ATPAF1-213ENST00000574428 EDDM13A0A1B0GTR0 161 aa24.24■■□□□ 1.47
ATPAF1-213ENST00000574428 C19orf67A6NJJ6 358 aa24.24■■□□□ 1.47
ATPAF1-213ENST00000574428 ALOX15BO15296 676 aa24.24■■□□□ 1.47
ATPAF1-213ENST00000574428 NDST3O95803 873 aa24.24■■□□□ 1.47
ATPAF1-213ENST00000574428 EPOP01588 193 aa24.24■■□□□ 1.47
ATPAF1-213ENST00000574428 CA4P22748 312 aa24.24■■□□□ 1.47
ATPAF1-213ENST00000574428 SERPINA4P29622 427 aa24.24■■□□□ 1.47
ATPAF1-213ENST00000574428 WASP42768 502 aa24.24■■□□□ 1.47
ATPAF1-213ENST00000574428 CHPFQ8IZ52 775 aa24.24■■□□□ 1.47
ATPAF1-213ENST00000574428 KRT222Q8N1A0 295 aa24.24■■□□□ 1.47
ATPAF1-213ENST00000574428 LPCAT1Q8NF37 534 aa24.24■■□□□ 1.47
ATPAF1-213ENST00000574428 FAM3CQ92520 227 aa24.24■■□□□ 1.47
ATPAF1-213ENST00000574428 ARNT2Q9HBZ2 717 aa24.24■■□□□ 1.47
ATPAF1-213ENST00000574428 CA14Q9ULX7 337 aa24.24■■□□□ 1.47
Retrieved 100 of 20,778 RNA–protein pairs in 40.2 ms