RNA–Protein interactions for RNA: ENST00000573577.5

RPAIN-213, Transcript of RPA interacting protein, humanhuman

TSL 2

Gene RPAIN, Length 1,282 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPAIN-213ENST00000573577 CDX4O14627 284 aaPredicted RBP13.71□□□□□ -0.21
RPAIN-213ENST00000573577 MATN3O15232 486 aa13.71□□□□□ -0.21
RPAIN-213ENST00000573577 BCAT2O15382 392 aaPredicted RBP13.71□□□□□ -0.21
RPAIN-213ENST00000573577 SLC7A4O43246 635 aa13.71□□□□□ -0.21
RPAIN-213ENST00000573577 KIF5CO60282 957 aa13.71□□□□□ -0.21
RPAIN-213ENST00000573577 LEFTY1O75610 366 aa13.71□□□□□ -0.21
RPAIN-213ENST00000573577 MAP3K6O95382 1288 aa13.71□□□□□ -0.21
RPAIN-213ENST00000573577 APOC2P02655 101 aa13.71□□□□□ -0.21
RPAIN-213ENST00000573577 IGHV4-34P06331 123 aa13.71□□□□□ -0.21
RPAIN-213ENST00000573577 PYGMP11217 842 aa13.71□□□□□ -0.21
RPAIN-213ENST00000573577 MMP13P45452 471 aa13.71□□□□□ -0.21
RPAIN-213ENST00000573577 CSNK1DP48730 415 aa13.71□□□□□ -0.21
RPAIN-213ENST00000573577 PPIDQ08752 370 aaKnown RBP13.71□□□□□ -0.21
RPAIN-213ENST00000573577 SLC10A7Q0GE19 358 aa13.71□□□□□ -0.21
RPAIN-213ENST00000573577 CNTN1Q12860 1018 aa13.71□□□□□ -0.21
RPAIN-213ENST00000573577 SLC10A2Q12908 348 aaPredicted RBP13.71□□□□□ -0.21
RPAIN-213ENST00000573577 LLGL1Q15334 1064 aa13.71□□□□□ -0.21
RPAIN-213ENST00000573577 ARSIQ5FYB1 569 aa13.71□□□□□ -0.21
RPAIN-213ENST00000573577 ATXN7L2Q5T6C5 722 aaPredicted RBP13.71□□□□□ -0.21
RPAIN-213ENST00000573577 AGBL4Q5VU57 503 aa13.71□□□□□ -0.21
RPAIN-213ENST00000573577 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP13.71□□□□□ -0.21
RPAIN-213ENST00000573577 DGLUCYQ7Z3D6 616 aa13.71□□□□□ -0.21
RPAIN-213ENST00000573577 REXO1L1PQ8IX06 675 aa13.71□□□□□ -0.21
RPAIN-213ENST00000573577 CCDC13Q8IYE1 715 aa13.71□□□□□ -0.21
RPAIN-213ENST00000573577 OR14C36Q8NHC7 312 aa13.71□□□□□ -0.21
RPAIN-213ENST00000573577 C1orf216Q8TAB5 229 aa13.71□□□□□ -0.21
RPAIN-213ENST00000573577 OLFM3Q96PB7 478 aa13.71□□□□□ -0.21
RPAIN-213ENST00000573577 FERMT1Q9BQL6 677 aa13.71□□□□□ -0.21
RPAIN-213ENST00000573577 HEMGNQ9BXL5 484 aa13.71□□□□□ -0.21
RPAIN-213ENST00000573577 FSCN3Q9NQT6 498 aa13.71□□□□□ -0.21
RPAIN-213ENST00000573577 TRMT1Q9NXH9 659 aaKnown RBP13.71□□□□□ -0.21
RPAIN-213ENST00000573577 LHX3Q9UBR4 397 aa13.71□□□□□ -0.21
RPAIN-213ENST00000573577 AMACRQ9UHK6 382 aa13.71□□□□□ -0.21
RPAIN-213ENST00000573577 GON4LQ3T8J9 2241 aa13.7□□□□□ -0.22
RPAIN-213ENST00000573577 C4orf47A7E2U8 309 aa13.7□□□□□ -0.22
RPAIN-213ENST00000573577 C10orf142B7Z368 130 aa13.7□□□□□ -0.22
RPAIN-213ENST00000573577 ARHGAP33O14559 1287 aa13.7□□□□□ -0.22
RPAIN-213ENST00000573577 PLRG1O43660 514 aaKnown RBP13.7□□□□□ -0.22
RPAIN-213ENST00000573577 ZNF189O75820 626 aaPredicted RBP13.7□□□□□ -0.22
RPAIN-213ENST00000573577 PEX11BO96011 259 aa13.7□□□□□ -0.22
RPAIN-213ENST00000573577 SYPP08247 313 aa13.7□□□□□ -0.22
RPAIN-213ENST00000573577 CCNB1P14635 433 aa13.7□□□□□ -0.22
RPAIN-213ENST00000573577 CD27P26842 260 aa13.7□□□□□ -0.22
RPAIN-213ENST00000573577 AFF3P51826 1226 aaKnown RBP13.7□□□□□ -0.22
RPAIN-213ENST00000573577 AP1S1P61966 158 aa13.7□□□□□ -0.22
RPAIN-213ENST00000573577 AP1B1Q10567 949 aa13.7□□□□□ -0.22
RPAIN-213ENST00000573577 RALGPS1Q5JS13 557 aa13.7□□□□□ -0.22
RPAIN-213ENST00000573577 NPNTQ6UXI9 565 aa13.7□□□□□ -0.22
RPAIN-213ENST00000573577 ERMP1Q7Z2K6 904 aa13.7□□□□□ -0.22
RPAIN-213ENST00000573577 TTC13Q8NBP0 860 aa13.7□□□□□ -0.22
RPAIN-213ENST00000573577 TSEN2Q8NCE0 465 aaKnown RBP13.7□□□□□ -0.22
RPAIN-213ENST00000573577 TFB1MQ8WVM0 346 aaKnown RBP13.7□□□□□ -0.22
RPAIN-213ENST00000573577 MAML1Q92585 1016 aa13.7□□□□□ -0.22
RPAIN-213ENST00000573577 EXOC2Q96KP1 924 aa13.7□□□□□ -0.22
RPAIN-213ENST00000573577 TUBGCP5Q96RT8 1024 aa13.7□□□□□ -0.22
RPAIN-213ENST00000573577 GTPBP2Q9BX10 602 aaKnown RBP13.7□□□□□ -0.22
RPAIN-213ENST00000573577 CPEB1Q9BZB8 566 aaKnown RBP13.7□□□□□ -0.22
RPAIN-213ENST00000573577 KDM4CQ9H3R0 1056 aa13.7□□□□□ -0.22
RPAIN-213ENST00000573577 TPX2Q9ULW0 747 aaKnown RBP13.7□□□□□ -0.22
RPAIN-213ENST00000573577 SLCO1B1Q9Y6L6 691 aa13.7□□□□□ -0.22
RPAIN-213ENST00000573577 WASF2Q9Y6W5 498 aa13.7□□□□□ -0.22
RPAIN-213ENST00000573577 NUMA1Q14980 2115 aa13.7□□□□□ -0.22
RPAIN-213ENST00000573577 TBC1D3DA0A087WVF3 549 aa13.69□□□□□ -0.22
RPAIN-213ENST00000573577 TBC1D3IA0A087WXS9 549 aa13.69□□□□□ -0.22
RPAIN-213ENST00000573577 TBC1D3EA0A087X179 549 aa13.69□□□□□ -0.22
RPAIN-213ENST00000573577 TBC1D3KA0A087X1G2 549 aa13.69□□□□□ -0.22
RPAIN-213ENST00000573577 DCDC2BA2VCK2 349 aa13.69□□□□□ -0.22
RPAIN-213ENST00000573577 TBC1D3FA6NER0 549 aaPredicted RBP13.69□□□□□ -0.22
RPAIN-213ENST00000573577 HACD1B0YJ81 288 aa13.69□□□□□ -0.22
RPAIN-213ENST00000573577 TBC1D3LB9A6J9 549 aa13.69□□□□□ -0.22
RPAIN-213ENST00000573577 RNF103O00237 685 aa13.69□□□□□ -0.22
RPAIN-213ENST00000573577 TM4SF5O14894 197 aa13.69□□□□□ -0.22
RPAIN-213ENST00000573577 MTSS1O43312 755 aa13.69□□□□□ -0.22
RPAIN-213ENST00000573577 TBC1D3HP0C7X1 549 aa13.69□□□□□ -0.22
RPAIN-213ENST00000573577 CES1P23141 567 aa13.69□□□□□ -0.22
RPAIN-213ENST00000573577 ITGB7P26010 798 aa13.69□□□□□ -0.22
RPAIN-213ENST00000573577 SCNN1BP51168 640 aa13.69□□□□□ -0.22
RPAIN-213ENST00000573577 CCR5P51681 352 aa13.69□□□□□ -0.22
RPAIN-213ENST00000573577 ATXN3P54252 364 aaPredicted RBP13.69□□□□□ -0.22
RPAIN-213ENST00000573577 ZNF211Q13398 564 aaPredicted RBP13.69□□□□□ -0.22
RPAIN-213ENST00000573577 XRCC4Q13426 336 aa13.69□□□□□ -0.22
RPAIN-213ENST00000573577 ZNF805Q5CZA5 627 aa13.69□□□□□ -0.22
RPAIN-213ENST00000573577 CFAP58Q5T655 872 aa13.69□□□□□ -0.22
RPAIN-213ENST00000573577 PIP5KL1Q5T9C9 394 aa13.69□□□□□ -0.22
RPAIN-213ENST00000573577 TBC1D3GQ6DHY5 549 aa13.69□□□□□ -0.22
RPAIN-213ENST00000573577 TBC1D3CQ6IPX1 549 aa13.69□□□□□ -0.22
RPAIN-213ENST00000573577 SRLQ86TD4 932 aa13.69□□□□□ -0.22
RPAIN-213ENST00000573577 TBC1D3Q8IZP1 549 aaPredicted RBP13.69□□□□□ -0.22
RPAIN-213ENST00000573577 TEX26Q8N6G2 289 aa13.69□□□□□ -0.22
RPAIN-213ENST00000573577 OR6K2Q8NGY2 324 aa13.69□□□□□ -0.22
RPAIN-213ENST00000573577 ARRDC3Q96B67 414 aa13.69□□□□□ -0.22
RPAIN-213ENST00000573577 HAUS1Q96CS2 278 aa13.69□□□□□ -0.22
RPAIN-213ENST00000573577 ZNF641Q96N77 438 aaPredicted RBP13.69□□□□□ -0.22
RPAIN-213ENST00000573577 LGMNQ99538 433 aa13.69□□□□□ -0.22
RPAIN-213ENST00000573577 MGME1Q9BQP7 344 aa13.69□□□□□ -0.22
RPAIN-213ENST00000573577 ORAI3Q9BRQ5 295 aa13.69□□□□□ -0.22
RPAIN-213ENST00000573577 HDAC8Q9BY41 377 aa13.69□□□□□ -0.22
RPAIN-213ENST00000573577 ZDHHC5Q9C0B5 715 aa13.69□□□□□ -0.22
RPAIN-213ENST00000573577 POLR1EQ9GZS1 481 aaKnown RBP13.69□□□□□ -0.22
RPAIN-213ENST00000573577 CARD9Q9H257 536 aa13.69□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 39.8 ms