RNA–Protein interactions for RNA: ENST00000569252.5

USB1-215, Transcript of U6 snRNA biogenesis phosphodiesterase 1, humanhuman

TSL 4

Gene USB1, Length 573 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USB1-215ENST00000569252 DPY19L3Q6ZPD9 716 aa16.23■□□□□ 0.19
USB1-215ENST00000569252 TMPRSS6Q8IU80 811 aa16.23■□□□□ 0.19
USB1-215ENST00000569252 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP16.23■□□□□ 0.19
USB1-215ENST00000569252 PRELID2Q8N945 189 aa16.23■□□□□ 0.19
USB1-215ENST00000569252 OR2A12Q8NGT7 310 aa16.23■□□□□ 0.19
USB1-215ENST00000569252 GANCQ8TET4 914 aa16.23■□□□□ 0.19
USB1-215ENST00000569252 SIPA1Q96FS4 1042 aa16.23■□□□□ 0.19
USB1-215ENST00000569252 PPP1R16AQ96I34 528 aa16.23■□□□□ 0.19
USB1-215ENST00000569252 TEKT5Q96M29 485 aa16.23■□□□□ 0.19
USB1-215ENST00000569252 NUDCD1Q96RS6 583 aa16.23■□□□□ 0.19
USB1-215ENST00000569252 MGME1Q9BQP7 344 aa16.23■□□□□ 0.19
USB1-215ENST00000569252 CEP41Q9BYV8 373 aa16.23■□□□□ 0.19
USB1-215ENST00000569252 MTG2Q9H4K7 406 aa16.23■□□□□ 0.19
USB1-215ENST00000569252 ZDHHC6Q9H6R6 413 aa16.23■□□□□ 0.19
USB1-215ENST00000569252 ATP13A3Q9H7F0 1226 aa16.23■□□□□ 0.19
USB1-215ENST00000569252 C10orf88Q9H8K7 445 aa16.23■□□□□ 0.19
USB1-215ENST00000569252 GOLGA6AQ9NYA3 693 aa16.23■□□□□ 0.19
USB1-215ENST00000569252 SMARCAL1Q9NZC9 954 aa16.23■□□□□ 0.19
USB1-215ENST00000569252 RSPH14Q9UHP6 348 aa16.23■□□□□ 0.19
USB1-215ENST00000569252 EVLQ9UI08 416 aaPredicted RBP16.23■□□□□ 0.19
USB1-215ENST00000569252 NCKAP1Q9Y2A7 1128 aa16.23■□□□□ 0.19
USB1-215ENST00000569252 ATP8A1Q9Y2Q0 1164 aa16.23■□□□□ 0.19
USB1-215ENST00000569252 ASPMQ8IZT6 3477 aa16.22■□□□□ 0.19
USB1-215ENST00000569252 A0A1W2PQF6 199 aa16.22■□□□□ 0.19
USB1-215ENST00000569252 C5orf60A6NFR6 353 aa16.22■□□□□ 0.19
USB1-215ENST00000569252 AXIN1O15169 862 aa16.22■□□□□ 0.19
USB1-215ENST00000569252 INSIG1O15503 277 aa16.22■□□□□ 0.19
USB1-215ENST00000569252 OPHN1O60890 802 aa16.22■□□□□ 0.19
USB1-215ENST00000569252 GAS8O95995 478 aa16.22■□□□□ 0.19
USB1-215ENST00000569252 ADH1BP00325 375 aa16.22■□□□□ 0.19
USB1-215ENST00000569252 SERPINF2P08697 491 aa16.22■□□□□ 0.19
USB1-215ENST00000569252 VAV1P15498 845 aa16.22■□□□□ 0.19
USB1-215ENST00000569252 SERPINA4P29622 427 aa16.22■□□□□ 0.19
USB1-215ENST00000569252 COILP38432 576 aaPredicted RBP16.22■□□□□ 0.19
USB1-215ENST00000569252 KCNJ1P48048 391 aa16.22■□□□□ 0.19
USB1-215ENST00000569252 FNTAP49354 379 aa16.22■□□□□ 0.19
USB1-215ENST00000569252 MAXP61244 160 aa16.22■□□□□ 0.19
USB1-215ENST00000569252 OASLQ15646 514 aaKnown RBP16.22■□□□□ 0.19
USB1-215ENST00000569252 ANKRD20A2Q5SQ80 823 aa16.22■□□□□ 0.19
USB1-215ENST00000569252 ANKRD20A1Q5TYW2 823 aa16.22■□□□□ 0.19
USB1-215ENST00000569252 ANKRD20A3Q5VUR7 823 aa16.22■□□□□ 0.19
USB1-215ENST00000569252 CCDC70Q6NSX1 233 aa16.22■□□□□ 0.19
USB1-215ENST00000569252 TMEM92Q6UXU6 159 aa16.22■□□□□ 0.19
USB1-215ENST00000569252 MMAAQ8IVH4 418 aaKnown RBP16.22■□□□□ 0.19
USB1-215ENST00000569252 C12orf50Q8NA57 414 aaPredicted RBP16.22■□□□□ 0.19
USB1-215ENST00000569252 TMIEQ8NEW7 156 aa16.22■□□□□ 0.19
USB1-215ENST00000569252 NETO1Q8TDF5 533 aa16.22■□□□□ 0.19
USB1-215ENST00000569252 HMGB4Q8WW32 186 aa16.22■□□□□ 0.19
USB1-215ENST00000569252 TUBGCP5Q96RT8 1024 aa16.22■□□□□ 0.19
USB1-215ENST00000569252 SEMA3CQ99985 751 aa16.22■□□□□ 0.19
USB1-215ENST00000569252 FAM126AQ9BYI3 521 aaPredicted RBP16.22■□□□□ 0.19
USB1-215ENST00000569252 SLC25A51Q9H1U9 297 aa16.22■□□□□ 0.19
USB1-215ENST00000569252 USP29Q9HBJ7 922 aa16.22■□□□□ 0.19
USB1-215ENST00000569252 GLOD4Q9HC38 313 aa16.22■□□□□ 0.19
USB1-215ENST00000569252 LHX3Q9UBR4 397 aa16.22■□□□□ 0.19
USB1-215ENST00000569252 SCML1Q9UN30 329 aa16.22■□□□□ 0.19
USB1-215ENST00000569252 LAMA1P25391 3075 aa16.22■□□□□ 0.19
USB1-215ENST00000569252 A0A1W2PQ67 120 aa16.21■□□□□ 0.19
USB1-215ENST00000569252 KPNA3O00505 521 aaPredicted RBP16.21■□□□□ 0.19
USB1-215ENST00000569252 FANCGO15287 622 aa16.21■□□□□ 0.19
USB1-215ENST00000569252 ZNF821O75541 412 aaPredicted RBP16.21■□□□□ 0.19
USB1-215ENST00000569252 GCATO75600 419 aa16.21■□□□□ 0.19
USB1-215ENST00000569252 HLA-DQB2P05538 268 aa16.21■□□□□ 0.19
USB1-215ENST00000569252 SDHBP21912 280 aa16.21■□□□□ 0.19
USB1-215ENST00000569252 XPAP23025 273 aaPredicted RBP16.21■□□□□ 0.19
USB1-215ENST00000569252 NFKBIAP25963 317 aa16.21■□□□□ 0.19
USB1-215ENST00000569252 LMAN1P49257 510 aa16.21■□□□□ 0.19
USB1-215ENST00000569252 NRLP54845 237 aa16.21■□□□□ 0.19
USB1-215ENST00000569252 POLR2LP62875 67 aaKnown RBP16.21■□□□□ 0.19
USB1-215ENST00000569252 ZBTB16Q05516 673 aa16.21■□□□□ 0.19
USB1-215ENST00000569252 WASHC5Q12768 1159 aa16.21■□□□□ 0.19
USB1-215ENST00000569252 ZBTB17Q13105 803 aa16.21■□□□□ 0.19
USB1-215ENST00000569252 PPP1R7Q15435 360 aa16.21■□□□□ 0.19
USB1-215ENST00000569252 CYP1B1Q16678 543 aa16.21■□□□□ 0.19
USB1-215ENST00000569252 P3H1Q32P28 736 aa16.21■□□□□ 0.19
USB1-215ENST00000569252 TTC31Q49AM3 519 aaPredicted RBP16.21■□□□□ 0.19
USB1-215ENST00000569252 KIAA1211LQ6NV74 962 aa16.21■□□□□ 0.19
USB1-215ENST00000569252 KIAA1324Q6UXG2 1013 aaKnown RBP16.21■□□□□ 0.19
USB1-215ENST00000569252 GDPD4Q6W3E5 623 aa16.21■□□□□ 0.19
USB1-215ENST00000569252 KLHL7Q8IXQ5 586 aa16.21■□□□□ 0.19
USB1-215ENST00000569252 NDUFAF2Q8N183 169 aa16.21■□□□□ 0.19
USB1-215ENST00000569252 ZNF567Q8N184 647 aa16.21■□□□□ 0.19
USB1-215ENST00000569252 OR6K2Q8NGY2 324 aa16.21■□□□□ 0.19
USB1-215ENST00000569252 CCDC110Q8TBZ0 833 aa16.21■□□□□ 0.19
USB1-215ENST00000569252 GRIN3AQ8TCU5 1115 aa16.21■□□□□ 0.19
USB1-215ENST00000569252 ZNF641Q96N77 438 aaPredicted RBP16.21■□□□□ 0.19
USB1-215ENST00000569252 SPATA13Q96N96 652 aa16.21■□□□□ 0.19
USB1-215ENST00000569252 OMDQ99983 421 aa16.21■□□□□ 0.19
USB1-215ENST00000569252 CPEB1Q9BZB8 566 aaKnown RBP16.21■□□□□ 0.19
USB1-215ENST00000569252 RSPH9Q9H1X1 276 aaPredicted RBP16.21■□□□□ 0.19
USB1-215ENST00000569252 ARRDC1-AS1Q9H2J1 176 aa16.21■□□□□ 0.19
USB1-215ENST00000569252 PAK5Q9P286 719 aa16.21■□□□□ 0.19
USB1-215ENST00000569252 AAR2Q9Y312 384 aaKnown RBP16.21■□□□□ 0.19
USB1-215ENST00000569252 EML5Q05BV3 1969 aa16.2■□□□□ 0.18
USB1-215ENST00000569252 LEFTY1O75610 366 aa16.2■□□□□ 0.18
USB1-215ENST00000569252 ANXA9O76027 345 aa16.2■□□□□ 0.18
USB1-215ENST00000569252 ECEL1O95672 775 aa16.2■□□□□ 0.18
USB1-215ENST00000569252 C5AR1P21730 350 aa16.2■□□□□ 0.18
USB1-215ENST00000569252 SLC8A1P32418 973 aa16.2■□□□□ 0.18
USB1-215ENST00000569252 PSMD8P48556 350 aa16.2■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 37.8 ms