RNA–Protein interactions for RNA: ENST00000569243.5

UBR1-209, Transcript of ubiquitin protein ligase E3 component n-recognin 1, humanhuman

TSL 3

Gene UBR1, Length 702 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR1-209ENST00000569243 NPIPB11E5RHQ5 1161 aa3.46□□□□□ -1.86
UBR1-209ENST00000569243 LMX1BO60663 402 aa3.46□□□□□ -1.86
UBR1-209ENST00000569243 SERPINC1P01008 464 aa3.46□□□□□ -1.86
UBR1-209ENST00000569243 IL1AP01583 271 aa3.46□□□□□ -1.86
UBR1-209ENST00000569243 BYSLQ13895 437 aaKnown RBP3.46□□□□□ -1.86
UBR1-209ENST00000569243 SETMARQ53H47 684 aaPredicted RBP3.46□□□□□ -1.86
UBR1-209ENST00000569243 STPG1Q5TH74 334 aa3.46□□□□□ -1.86
UBR1-209ENST00000569243 GJB7Q6PEY0 223 aa3.46□□□□□ -1.86
UBR1-209ENST00000569243 SPICE1Q8N0Z3 855 aa3.46□□□□□ -1.86
UBR1-209ENST00000569243 ATG16L2Q8NAA4 619 aa3.46□□□□□ -1.86
UBR1-209ENST00000569243 SETD9Q8NE22 299 aa3.46□□□□□ -1.86
UBR1-209ENST00000569243 TMEM170AQ8WVE7 144 aa3.46□□□□□ -1.86
UBR1-209ENST00000569243 CD101Q93033 1021 aa3.46□□□□□ -1.86
UBR1-209ENST00000569243 RNF183Q96D59 192 aa3.46□□□□□ -1.86
UBR1-209ENST00000569243 MTBPQ96DY7 904 aa3.46□□□□□ -1.86
UBR1-209ENST00000569243 KTI12Q96EK9 354 aaPredicted RBP3.46□□□□□ -1.86
UBR1-209ENST00000569243 PGLYRP2Q96PD5 576 aa3.46□□□□□ -1.86
UBR1-209ENST00000569243 OR1F2PQ96R84 312 aa3.46□□□□□ -1.86
UBR1-209ENST00000569243 TWSG1Q9GZX9 223 aa3.46□□□□□ -1.86
UBR1-209ENST00000569243 ACAD9Q9H845 621 aa3.46□□□□□ -1.86
UBR1-209ENST00000569243 WDR6Q9NNW5 1121 aaKnown RBP3.46□□□□□ -1.86
UBR1-209ENST00000569243 SPATS2LQ9NUQ6 558 aaKnown RBP3.46□□□□□ -1.86
UBR1-209ENST00000569243 MALT1Q9UDY8 824 aa3.46□□□□□ -1.86
UBR1-209ENST00000569243 KCND3Q9UK17 655 aa3.46□□□□□ -1.86
UBR1-209ENST00000569243 H0Y3Z8 333 aa3.45□□□□□ -1.86
UBR1-209ENST00000569243 TIMM23O14925 209 aa3.45□□□□□ -1.86
UBR1-209ENST00000569243 HBP1O60381 514 aa3.45□□□□□ -1.86
UBR1-209ENST00000569243 PMS2P2O95744 297 aa3.45□□□□□ -1.86
UBR1-209ENST00000569243 HMGB1P09429 215 aaKnown RBP3.45□□□□□ -1.86
UBR1-209ENST00000569243 CTPS1P17812 591 aa3.45□□□□□ -1.86
UBR1-209ENST00000569243 ARHGAP8P85298 464 aa3.45□□□□□ -1.86
UBR1-209ENST00000569243 SLC18A2Q05940 514 aa3.45□□□□□ -1.86
UBR1-209ENST00000569243 DHX34Q14147 1143 aaKnown RBP3.45□□□□□ -1.86
UBR1-209ENST00000569243 KRTAP13-3Q3SY46 172 aa3.45□□□□□ -1.86
UBR1-209ENST00000569243 SULT6B1Q6IMI4 303 aa3.45□□□□□ -1.86
UBR1-209ENST00000569243 GGT6Q6P531 493 aa3.45□□□□□ -1.86
UBR1-209ENST00000569243 GDPD4Q6W3E5 623 aa3.45□□□□□ -1.86
UBR1-209ENST00000569243 FOXL2NBQ6ZUU3 175 aa3.45□□□□□ -1.86
UBR1-209ENST00000569243 SPATA20Q8TB22 786 aa3.45□□□□□ -1.86
UBR1-209ENST00000569243 THAP4Q8WY91 577 aa3.45□□□□□ -1.86
UBR1-209ENST00000569243 ATOH1Q92858 354 aaPredicted RBP3.45□□□□□ -1.86
UBR1-209ENST00000569243 LTV1Q96GA3 475 aaPredicted RBP3.45□□□□□ -1.86
UBR1-209ENST00000569243 NPLQ9BXD5 320 aaPredicted RBP3.45□□□□□ -1.86
UBR1-209ENST00000569243 SEPSECSQ9HD40 501 aaKnown RBP3.45□□□□□ -1.86
UBR1-209ENST00000569243 SAYSD1Q9NPB0 183 aa3.45□□□□□ -1.86
UBR1-209ENST00000569243 OR6C3Q9NZP0 311 aa3.45□□□□□ -1.86
UBR1-209ENST00000569243 CD207Q9UJ71 328 aa3.45□□□□□ -1.86
UBR1-209ENST00000569243 TCF19Q9Y242 345 aa3.45□□□□□ -1.86
UBR1-209ENST00000569243 E7EVH7 732 aa3.44□□□□□ -1.86
UBR1-209ENST00000569243 EBAG9O00559 213 aa3.44□□□□□ -1.86
UBR1-209ENST00000569243 TIPRLO75663 272 aa3.44□□□□□ -1.86
UBR1-209ENST00000569243 FAM155BO75949 473 aa3.44□□□□□ -1.86
UBR1-209ENST00000569243 PAK4O96013 591 aaPredicted RBP3.44□□□□□ -1.86
UBR1-209ENST00000569243 RNF224P0DH78 156 aa3.44□□□□□ -1.86
UBR1-209ENST00000569243 MCM3P25205 808 aa3.44□□□□□ -1.86
UBR1-209ENST00000569243 TTKP33981 857 aa3.44□□□□□ -1.86
UBR1-209ENST00000569243 LIFRP42702 1097 aa3.44□□□□□ -1.86
UBR1-209ENST00000569243 CRIP2P52943 208 aaPredicted RBP3.44□□□□□ -1.86
UBR1-209ENST00000569243 IL13RA2Q14627 380 aa3.44□□□□□ -1.86
UBR1-209ENST00000569243 BRD3Q15059 726 aa3.44□□□□□ -1.86
UBR1-209ENST00000569243 SYT16Q17RD7 645 aa3.44□□□□□ -1.86
UBR1-209ENST00000569243 LRRC24Q50LG9 513 aa3.44□□□□□ -1.86
UBR1-209ENST00000569243 PLEKHA7Q6IQ23 1121 aa3.44□□□□□ -1.86
UBR1-209ENST00000569243 C1orf228Q6PIY5 440 aa3.44□□□□□ -1.86
UBR1-209ENST00000569243 SFTPA2Q8IWL1 248 aa3.44□□□□□ -1.86
UBR1-209ENST00000569243 MB21D2Q8IYB1 491 aaPredicted RBP3.44□□□□□ -1.86
UBR1-209ENST00000569243 MAB21L3Q8N8X9 362 aa3.44□□□□□ -1.86
UBR1-209ENST00000569243 LNX1Q8TBB1 728 aaPredicted RBP3.44□□□□□ -1.86
UBR1-209ENST00000569243 SH3KBP1Q96B97 665 aa3.44□□□□□ -1.86
UBR1-209ENST00000569243 PLEKHA2Q9HB19 425 aa3.44□□□□□ -1.86
UBR1-209ENST00000569243 NLKQ9UBE8 527 aa3.44□□□□□ -1.86
UBR1-209ENST00000569243 PCDHAC2Q9Y5I4 1007 aa3.44□□□□□ -1.86
UBR1-209ENST00000569243 GREB1LQ9C091 1923 aaPredicted RBP3.44□□□□□ -1.86
UBR1-209ENST00000569243 FAM72CH0Y354 149 aa3.43□□□□□ -1.86
UBR1-209ENST00000569243 CBX6O95503 412 aa3.43□□□□□ -1.86
UBR1-209ENST00000569243 VEGFAP15692 232 aaPredicted RBP3.43□□□□□ -1.86
UBR1-209ENST00000569243 PHEXP78562 749 aa3.43□□□□□ -1.86
UBR1-209ENST00000569243 GOLGA8FQ08AF8 430 aa3.43□□□□□ -1.86
UBR1-209ENST00000569243 DMP1Q13316 513 aaPredicted RBP3.43□□□□□ -1.86
UBR1-209ENST00000569243 CCDC38Q502W7 563 aa3.43□□□□□ -1.86
UBR1-209ENST00000569243 FAM72AQ5TYM5 149 aa3.43□□□□□ -1.86
UBR1-209ENST00000569243 FAM72DQ6L9T8 149 aa3.43□□□□□ -1.86
UBR1-209ENST00000569243 TRMT1LQ7Z2T5 733 aaKnown RBP3.43□□□□□ -1.86
UBR1-209ENST00000569243 FAM72BQ86X60 149 aa3.43□□□□□ -1.86
UBR1-209ENST00000569243 CCDC105Q8IYK2 499 aa3.43□□□□□ -1.86
UBR1-209ENST00000569243 WDSUB1Q8N9V3 476 aa3.43□□□□□ -1.86
UBR1-209ENST00000569243 RASSF8Q8NHQ8 419 aa3.43□□□□□ -1.86
UBR1-209ENST00000569243 SECTM1Q8WVN6 248 aa3.43□□□□□ -1.86
UBR1-209ENST00000569243 POF1BQ8WVV4 589 aa3.43□□□□□ -1.86
UBR1-209ENST00000569243 MASTLQ96GX5 879 aa3.43□□□□□ -1.86
UBR1-209ENST00000569243 CXorf56Q9H5V9 222 aa3.43□□□□□ -1.86
UBR1-209ENST00000569243 ZNF224Q9NZL3 707 aa3.43□□□□□ -1.86
UBR1-209ENST00000569243 IFT80Q9P2H3 777 aaPredicted RBP3.43□□□□□ -1.86
UBR1-209ENST00000569243 SRP68Q9UHB9 627 aaKnown RBP3.43□□□□□ -1.86
UBR1-209ENST00000569243 SLCO3A1Q9UIG8 710 aa3.43□□□□□ -1.86
UBR1-209ENST00000569243 CNPY2Q9Y2B0 182 aa3.43□□□□□ -1.86
UBR1-209ENST00000569243 F5H423 210 aaPredicted RBP3.42□□□□□ -1.86
UBR1-209ENST00000569243 J3KR12 359 aa3.42□□□□□ -1.86
UBR1-209ENST00000569243 GPTP24298 496 aa3.42□□□□□ -1.86
UBR1-209ENST00000569243 CDKN1AP38936 164 aa3.42□□□□□ -1.86
Retrieved 100 of 20,778 RNA–protein pairs in 61 ms