RNA–Protein interactions for RNA: ENST00000567704.5

CSPG4P13-202, Transcript of chondroitin sulfate proteoglycan 4 pseudogene 13, humanhuman

BASIC

Gene CSPG4P13, Length 4,801 nt, Biotype transcribed unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSPG4P13-202ENST00000567704 BHMTQ93088 406 aa12.5□□□□□ -0.41
CSPG4P13-202ENST00000567704 FBXL8Q96CD0 374 aa12.5□□□□□ -0.41
CSPG4P13-202ENST00000567704 REXO5Q96IC2 774 aaKnown RBP12.5□□□□□ -0.41
CSPG4P13-202ENST00000567704 PMF1-BGLAPU3KQ54 211 aa12.5□□□□□ -0.41
CSPG4P13-202ENST00000567704 PCP4L1A6NKN8 68 aa12.49□□□□□ -0.41
CSPG4P13-202ENST00000567704 G3V2T6 193 aa12.49□□□□□ -0.41
CSPG4P13-202ENST00000567704 ZBTB24O43167 697 aaPredicted RBP12.49□□□□□ -0.41
CSPG4P13-202ENST00000567704 FADS2O95864 444 aaKnown RBP12.49□□□□□ -0.41
CSPG4P13-202ENST00000567704 GNA12Q03113 381 aa12.49□□□□□ -0.41
CSPG4P13-202ENST00000567704 FCHO2Q0JRZ9 810 aa12.49□□□□□ -0.41
CSPG4P13-202ENST00000567704 PTP4A2Q12974 167 aa12.49□□□□□ -0.41
CSPG4P13-202ENST00000567704 PHKG1Q16816 387 aa12.49□□□□□ -0.41
CSPG4P13-202ENST00000567704 PTPN20Q4JDL3 420 aa12.49□□□□□ -0.41
CSPG4P13-202ENST00000567704 PAN2Q504Q3 1202 aaKnown RBP12.49□□□□□ -0.41
CSPG4P13-202ENST00000567704 NIPA1Q7RTP0 329 aa12.49□□□□□ -0.41
CSPG4P13-202ENST00000567704 CYP4Z1Q86W10 505 aa12.49□□□□□ -0.41
CSPG4P13-202ENST00000567704 SAMD3Q8N6K7 520 aa12.49□□□□□ -0.41
CSPG4P13-202ENST00000567704 HOPXQ9BPY8 73 aaPredicted RBP12.49□□□□□ -0.41
CSPG4P13-202ENST00000567704 GATA5Q9BWX5 397 aaPredicted RBP12.49□□□□□ -0.41
CSPG4P13-202ENST00000567704 UNC93B1Q9H1C4 597 aa12.49□□□□□ -0.41
CSPG4P13-202ENST00000567704 FBXO5Q9UKT4 447 aa12.49□□□□□ -0.41
CSPG4P13-202ENST00000567704 EFR3BQ9Y2G0 817 aa12.49□□□□□ -0.41
CSPG4P13-202ENST00000567704 PSMD11O00231 422 aa12.49□□□□□ -0.41
CSPG4P13-202ENST00000567704 BTN3A3O00478 584 aa12.49□□□□□ -0.41
CSPG4P13-202ENST00000567704 AZIN1O14977 448 aa12.49□□□□□ -0.41
CSPG4P13-202ENST00000567704 LRCH4O75427 683 aa12.49□□□□□ -0.41
CSPG4P13-202ENST00000567704 ALDH4A1P30038 563 aa12.49□□□□□ -0.41
CSPG4P13-202ENST00000567704 COPZ1P61923 177 aa12.49□□□□□ -0.41
CSPG4P13-202ENST00000567704 TRIM71Q2Q1W2 868 aaKnown RBP12.49□□□□□ -0.41
CSPG4P13-202ENST00000567704 MON1BQ7L1V2 547 aa12.49□□□□□ -0.41
CSPG4P13-202ENST00000567704 STAG3L4Q8TBR4 150 aa12.49□□□□□ -0.41
CSPG4P13-202ENST00000567704 MRPL39Q9NYK5 338 aaKnown RBP12.49□□□□□ -0.41
CSPG4P13-202ENST00000567704 NOCTQ9UK39 431 aaKnown RBP12.49□□□□□ -0.41
CSPG4P13-202ENST00000567704 TIMM13Q9Y5L4 95 aaPredicted RBP12.49□□□□□ -0.41
CSPG4P13-202ENST00000567704 C9JVG2 144 aa12.49□□□□□ -0.41
CSPG4P13-202ENST00000567704 ACKR2O00590 384 aa12.49□□□□□ -0.41
CSPG4P13-202ENST00000567704 IL1R1P14778 569 aa12.49□□□□□ -0.41
CSPG4P13-202ENST00000567704 MYL12AP19105 171 aa12.49□□□□□ -0.41
CSPG4P13-202ENST00000567704 PRDX6P30041 224 aa12.49□□□□□ -0.41
CSPG4P13-202ENST00000567704 TNFSF9P41273 254 aa12.49□□□□□ -0.41
CSPG4P13-202ENST00000567704 DLG2Q15700 870 aa12.49□□□□□ -0.41
CSPG4P13-202ENST00000567704 KIAA0408Q6ZU52 694 aa12.49□□□□□ -0.41
CSPG4P13-202ENST00000567704 GPSM1Q86YR5 675 aa12.49□□□□□ -0.41
CSPG4P13-202ENST00000567704 PDPRQ8NCN5 879 aa12.49□□□□□ -0.41
CSPG4P13-202ENST00000567704 TRAPPC12Q8WVT3 735 aa12.49□□□□□ -0.41
CSPG4P13-202ENST00000567704 MYDGFQ969H8 173 aa12.49□□□□□ -0.41
CSPG4P13-202ENST00000567704 MFSD14AQ96MC6 490 aa12.49□□□□□ -0.41
CSPG4P13-202ENST00000567704 ASB7Q9H672 318 aa12.49□□□□□ -0.41
CSPG4P13-202ENST00000567704 PCDH18Q9HCL0 1135 aa12.49□□□□□ -0.41
CSPG4P13-202ENST00000567704 PRR23AA6NEV1 266 aa12.49□□□□□ -0.41
CSPG4P13-202ENST00000567704 MTA2O94776 668 aa12.49□□□□□ -0.41
CSPG4P13-202ENST00000567704 SERPINF2P08697 491 aa12.49□□□□□ -0.41
CSPG4P13-202ENST00000567704 CD48P09326 243 aa12.49□□□□□ -0.41
CSPG4P13-202ENST00000567704 ERCC2P18074 760 aa12.49□□□□□ -0.41
CSPG4P13-202ENST00000567704 SIM2Q14190 667 aaPredicted RBP12.49□□□□□ -0.41
CSPG4P13-202ENST00000567704 HIST2H2ACQ16777 129 aaPredicted RBP12.49□□□□□ -0.41
CSPG4P13-202ENST00000567704 HIST2H2AA3Q6FI13 130 aa12.49□□□□□ -0.41
CSPG4P13-202ENST00000567704 CDYL2Q8N8U2 506 aa12.49□□□□□ -0.41
CSPG4P13-202ENST00000567704 C19orf60Q96EN9 201 aa12.49□□□□□ -0.41
CSPG4P13-202ENST00000567704 KATNAL1Q9BW62 490 aa12.49□□□□□ -0.41
CSPG4P13-202ENST00000567704 SENP6Q9GZR1 1112 aaPredicted RBP12.49□□□□□ -0.41
CSPG4P13-202ENST00000567704 SNTG2Q9NY99 539 aa12.49□□□□□ -0.41
CSPG4P13-202ENST00000567704 PCDHGC3Q9UN70 934 aa12.49□□□□□ -0.41
CSPG4P13-202ENST00000567704 GPC1P35052 558 aa12.48□□□□□ -0.41
CSPG4P13-202ENST00000567704 TUBP50607 506 aa12.48□□□□□ -0.41
CSPG4P13-202ENST00000567704 CDK9P50750 372 aaKnown RBP12.48□□□□□ -0.41
CSPG4P13-202ENST00000567704 GDF10P55107 478 aa12.48□□□□□ -0.41
CSPG4P13-202ENST00000567704 RAB15P59190 212 aa12.48□□□□□ -0.41
CSPG4P13-202ENST00000567704 MPP2Q14168 576 aa12.48□□□□□ -0.41
CSPG4P13-202ENST00000567704 FAM187BQ17R55 369 aa12.48□□□□□ -0.41
CSPG4P13-202ENST00000567704 PYDC2Q56P42 97 aa12.48□□□□□ -0.41
CSPG4P13-202ENST00000567704 PITRM1Q5JRX3 1037 aa12.48□□□□□ -0.41
CSPG4P13-202ENST00000567704 OLFM1Q99784 485 aa12.48□□□□□ -0.41
CSPG4P13-202ENST00000567704 PCDHAC1Q9H158 963 aa12.48□□□□□ -0.41
CSPG4P13-202ENST00000567704 SETD4Q9NVD3 440 aa12.48□□□□□ -0.41
CSPG4P13-202ENST00000567704 UBA2Q9UBT2 640 aaPredicted RBP12.48□□□□□ -0.41
CSPG4P13-202ENST00000567704 KLQ9UEF7 1012 aa12.48□□□□□ -0.41
CSPG4P13-202ENST00000567704 VAV3Q9UKW4 847 aa12.48□□□□□ -0.41
CSPG4P13-202ENST00000567704 RGS14O43566 566 aa12.48□□□□□ -0.41
CSPG4P13-202ENST00000567704 NTRK1P04629 796 aa12.48□□□□□ -0.41
CSPG4P13-202ENST00000567704 FEN1P39748 380 aaKnown RBP12.48□□□□□ -0.41
CSPG4P13-202ENST00000567704 CERCAMQ5T4B2 595 aa12.48□□□□□ -0.41
CSPG4P13-202ENST00000567704 TRMT10BQ6PF06 316 aaKnown RBP12.48□□□□□ -0.41
CSPG4P13-202ENST00000567704 PDSS2Q86YH6 399 aa12.48□□□□□ -0.41
CSPG4P13-202ENST00000567704 APOBEC3FQ8IUX4 373 aaKnown RBP12.48□□□□□ -0.41
CSPG4P13-202ENST00000567704 TCAIMQ8N3R3 496 aa12.48□□□□□ -0.41
CSPG4P13-202ENST00000567704 SCAIQ8N9R8 606 aa12.48□□□□□ -0.41
CSPG4P13-202ENST00000567704 NACC2Q96BF6 587 aa12.48□□□□□ -0.41
CSPG4P13-202ENST00000567704 P2RY11Q96G91 374 aa12.48□□□□□ -0.41
CSPG4P13-202ENST00000567704 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP12.48□□□□□ -0.41
CSPG4P13-202ENST00000567704 SH3BGRLO75368 114 aa12.48□□□□□ -0.41
CSPG4P13-202ENST00000567704 XRCC1P18887 633 aaPredicted RBP12.48□□□□□ -0.41
CSPG4P13-202ENST00000567704 HARS2P49590 506 aaKnown RBP12.48□□□□□ -0.41
CSPG4P13-202ENST00000567704 EFEMP1Q12805 493 aa12.48□□□□□ -0.41
CSPG4P13-202ENST00000567704 FSCN1Q16658 493 aaKnown RBP12.48□□□□□ -0.41
CSPG4P13-202ENST00000567704 VPS26BQ4G0F5 336 aa12.48□□□□□ -0.41
CSPG4P13-202ENST00000567704 THOC7Q6I9Y2 204 aaKnown RBP12.48□□□□□ -0.41
CSPG4P13-202ENST00000567704 GLYATQ6IB77 296 aa12.48□□□□□ -0.41
CSPG4P13-202ENST00000567704 XKR5Q6UX68 686 aa12.48□□□□□ -0.41
CSPG4P13-202ENST00000567704 C12orf56Q8IXR9 622 aa12.48□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 37.9 ms