RNA–Protein interactions for RNA: ENST00000564096.1

CLK3-214, Transcript of CDC like kinase 3, humanhuman

TSL 2

Gene CLK3, Length 805 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK3-214ENST00000564096 OR8D1Q8WZ84 308 aa12.95□□□□□ -0.34
CLK3-214ENST00000564096 FAM3CQ92520 227 aa12.95□□□□□ -0.34
CLK3-214ENST00000564096 ZNF641Q96N77 438 aaPredicted RBP12.95□□□□□ -0.34
CLK3-214ENST00000564096 HEPHQ9BQS7 1158 aa12.95□□□□□ -0.34
CLK3-214ENST00000564096 NAT9Q9BTE0 207 aa12.95□□□□□ -0.34
CLK3-214ENST00000564096 IL22Q9GZX6 179 aa12.95□□□□□ -0.34
CLK3-214ENST00000564096 SAYSD1Q9NPB0 183 aa12.95□□□□□ -0.34
CLK3-214ENST00000564096 CASS4Q9NQ75 786 aa12.95□□□□□ -0.34
CLK3-214ENST00000564096 ARHGEF3Q9NR81 526 aa12.95□□□□□ -0.34
CLK3-214ENST00000564096 SUN2Q9UH99 717 aa12.95□□□□□ -0.34
CLK3-214ENST00000564096 EVLQ9UI08 416 aaPredicted RBP12.95□□□□□ -0.34
CLK3-214ENST00000564096 SLCO3A1Q9UIG8 710 aa12.95□□□□□ -0.34
CLK3-214ENST00000564096 FBXL21Q9UKT6 434 aa12.95□□□□□ -0.34
CLK3-214ENST00000564096 RPL26L1Q9UNX3 145 aaKnown RBP12.95□□□□□ -0.34
CLK3-214ENST00000564096 MRPS17Q9Y2R5 130 aaKnown RBP12.95□□□□□ -0.34
CLK3-214ENST00000564096 TICRRQ7Z2Z1 1910 aa12.95□□□□□ -0.34
CLK3-214ENST00000564096 WASH3PC4AMC7 463 aa12.94□□□□□ -0.34
CLK3-214ENST00000564096 E7ESA3 106 aa12.94□□□□□ -0.34
CLK3-214ENST00000564096 SYNCRIPO60506 623 aaKnown RBP12.94□□□□□ -0.34
CLK3-214ENST00000564096 USP12O75317 370 aa12.94□□□□□ -0.34
CLK3-214ENST00000564096 NDST3O95803 873 aa12.94□□□□□ -0.34
CLK3-214ENST00000564096 PRNPP04156 253 aa12.94□□□□□ -0.34
CLK3-214ENST00000564096 HNRNPLP14866 589 aaKnown RBP eCLIP12.94□□□□□ -0.34
CLK3-214ENST00000564096 ADRA1AP35348 466 aa12.94□□□□□ -0.34
CLK3-214ENST00000564096 MAGEA3P43357 314 aa12.94□□□□□ -0.34
CLK3-214ENST00000564096 GRIA4P48058 902 aa12.94□□□□□ -0.34
CLK3-214ENST00000564096 PMS2P54278 862 aa12.94□□□□□ -0.34
CLK3-214ENST00000564096 SESN2P58004 480 aaPredicted RBP12.94□□□□□ -0.34
CLK3-214ENST00000564096 MESP2Q0VG99 397 aa12.94□□□□□ -0.34
CLK3-214ENST00000564096 SLC1A5Q15758 541 aa12.94□□□□□ -0.34
CLK3-214ENST00000564096 MYLK3Q32MK0 819 aa12.94□□□□□ -0.34
CLK3-214ENST00000564096 HSF5Q4G112 596 aaPredicted RBP12.94□□□□□ -0.34
CLK3-214ENST00000564096 CCDC38Q502W7 563 aa12.94□□□□□ -0.34
CLK3-214ENST00000564096 SLC44A4Q53GD3 710 aa12.94□□□□□ -0.34
CLK3-214ENST00000564096 SPDYCQ5MJ68 293 aa12.94□□□□□ -0.34
CLK3-214ENST00000564096 FAM182AQ5T1J6 154 aa12.94□□□□□ -0.34
CLK3-214ENST00000564096 EGFLAMQ63HQ2 1017 aa12.94□□□□□ -0.34
CLK3-214ENST00000564096 CASC4Q6P4E1 433 aa12.94□□□□□ -0.34
CLK3-214ENST00000564096 TXNDC11Q6PKC3 985 aa12.94□□□□□ -0.34
CLK3-214ENST00000564096 ZNF852Q6ZMS4 543 aa12.94□□□□□ -0.34
CLK3-214ENST00000564096 DPY19L3Q6ZPD9 716 aa12.94□□□□□ -0.34
CLK3-214ENST00000564096 ZNF534Q76KX8 674 aa12.94□□□□□ -0.34
CLK3-214ENST00000564096 TRMT10CQ7L0Y3 403 aaKnown RBP12.94□□□□□ -0.34
CLK3-214ENST00000564096 MREGQ8N565 214 aa12.94□□□□□ -0.34
CLK3-214ENST00000564096 PPHLN1Q8NEY8 458 aaKnown RBP12.94□□□□□ -0.34
CLK3-214ENST00000564096 LPCAT1Q8NF37 534 aa12.94□□□□□ -0.34
CLK3-214ENST00000564096 OR52K1Q8NGK4 314 aa12.94□□□□□ -0.34
CLK3-214ENST00000564096 OR2A12Q8NGT7 310 aa12.94□□□□□ -0.34
CLK3-214ENST00000564096 OR6K2Q8NGY2 324 aa12.94□□□□□ -0.34
CLK3-214ENST00000564096 FRS2Q8WU20 508 aa12.94□□□□□ -0.34
CLK3-214ENST00000564096 PDCD6IPQ8WUM4 868 aaKnown RBP12.94□□□□□ -0.34
CLK3-214ENST00000564096 RMDN1Q96DB5 314 aa12.94□□□□□ -0.34
CLK3-214ENST00000564096 PPP1R16AQ96I34 528 aa12.94□□□□□ -0.34
CLK3-214ENST00000564096 SHDQ96IW2 340 aa12.94□□□□□ -0.34
CLK3-214ENST00000564096 SRPK1Q96SB4 655 aaKnown RBP12.94□□□□□ -0.34
CLK3-214ENST00000564096 APOL2Q9BQE5 337 aa12.94□□□□□ -0.34
CLK3-214ENST00000564096 CPEB1Q9BZB8 566 aaKnown RBP12.94□□□□□ -0.34
CLK3-214ENST00000564096 FBRSQ9HAH7 460 aa12.94□□□□□ -0.34
CLK3-214ENST00000564096 IL36AQ9UHA7 158 aa12.94□□□□□ -0.34
CLK3-214ENST00000564096 MUC22E2RYF6 1773 aaPredicted RBP12.94□□□□□ -0.34
CLK3-214ENST00000564096 LOC285095A0A1B0GVY8 99 aa12.93□□□□□ -0.34
CLK3-214ENST00000564096 TTC24A2A3L6 582 aaPredicted RBP12.93□□□□□ -0.34
CLK3-214ENST00000564096 C19orf67A6NJJ6 358 aa12.93□□□□□ -0.34
CLK3-214ENST00000564096 SDR42E2A6NKP2 422 aa12.93□□□□□ -0.34
CLK3-214ENST00000564096 C1QTNF3-AMACRE9PGA6 284 aa12.93□□□□□ -0.34
CLK3-214ENST00000564096 ZNF821O75541 412 aaPredicted RBP12.93□□□□□ -0.34
CLK3-214ENST00000564096 SPAG6O75602 509 aa12.93□□□□□ -0.34
CLK3-214ENST00000564096 GJB3O75712 270 aa12.93□□□□□ -0.34
CLK3-214ENST00000564096 PGLSO95336 258 aa12.93□□□□□ -0.34
CLK3-214ENST00000564096 EPHX1P07099 455 aa12.93□□□□□ -0.34
CLK3-214ENST00000564096 ALADP13716 330 aa12.93□□□□□ -0.34
CLK3-214ENST00000564096 TSHRP16473 764 aa12.93□□□□□ -0.34
CLK3-214ENST00000564096 PGAM1P18669 254 aa12.93□□□□□ -0.34
CLK3-214ENST00000564096 PHBP35232 272 aa12.93□□□□□ -0.34
CLK3-214ENST00000564096 IL12RB1P42701 662 aa12.93□□□□□ -0.34
CLK3-214ENST00000564096 MAGEA4P43358 317 aa12.93□□□□□ -0.34
CLK3-214ENST00000564096 NPY2RP49146 381 aa12.93□□□□□ -0.34
CLK3-214ENST00000564096 SEC13P55735 322 aa12.93□□□□□ -0.34
CLK3-214ENST00000564096 MRPS21P82921 87 aaKnown RBP12.93□□□□□ -0.34
CLK3-214ENST00000564096 TRAF2Q12933 501 aa12.93□□□□□ -0.34
CLK3-214ENST00000564096 LRRC32Q14392 662 aa12.93□□□□□ -0.34
CLK3-214ENST00000564096 FSTL4Q6MZW2 842 aa12.93□□□□□ -0.34
CLK3-214ENST00000564096 BRAT1Q6PJG6 821 aa12.93□□□□□ -0.34
CLK3-214ENST00000564096 CAND1Q86VP6 1230 aaKnown RBP12.93□□□□□ -0.34
CLK3-214ENST00000564096 SLC25A41Q8N5S1 370 aa12.93□□□□□ -0.34
CLK3-214ENST00000564096 GRIN3AQ8TCU5 1115 aa12.93□□□□□ -0.34
CLK3-214ENST00000564096 PYROXD1Q8WU10 500 aa12.93□□□□□ -0.34
CLK3-214ENST00000564096 PTCD2Q8WV60 388 aaKnown RBP12.93□□□□□ -0.34
CLK3-214ENST00000564096 UBLCP1Q8WVY7 318 aaPredicted RBP12.93□□□□□ -0.34
CLK3-214ENST00000564096 ANKRD7Q92527 254 aa12.93□□□□□ -0.34
CLK3-214ENST00000564096 STAMBPL1Q96FJ0 436 aa12.93□□□□□ -0.34
CLK3-214ENST00000564096 TMEM245Q9H330 911 aa12.93□□□□□ -0.34
CLK3-214ENST00000564096 ARNT2Q9HBZ2 717 aa12.93□□□□□ -0.34
CLK3-214ENST00000564096 CACNA2D2Q9NY47 1150 aa12.93□□□□□ -0.34
CLK3-214ENST00000564096 MAD1L1Q9Y6D9 718 aa12.93□□□□□ -0.34
CLK3-214ENST00000564096 STON1Q9Y6Q2 735 aa12.93□□□□□ -0.34
CLK3-214ENST00000564096 NUP205Q92621 2012 aa12.93□□□□□ -0.34
CLK3-214ENST00000564096 REV3LO60673 3130 aa12.92□□□□□ -0.34
CLK3-214ENST00000564096 HEATR9A2RTY3 570 aa12.92□□□□□ -0.34
CLK3-214ENST00000564096 HTRA2O43464 458 aaPredicted RBP12.92□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms