RNA–Protein interactions for RNA: ENST00000563404.1

HDGFL3-203, Transcript of HDGF like 3, humanhuman

TSL 5

Gene HDGFL3, Length 448 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDGFL3-203ENST00000563404 PRRT3Q5FWE3 981 aa17.02■□□□□ 0.32
HDGFL3-203ENST00000563404 ARHGAP40Q5TG30 622 aa17.02■□□□□ 0.32
HDGFL3-203ENST00000563404 IGF2-ASQ6U949 168 aa17.02■□□□□ 0.32
HDGFL3-203ENST00000563404 GDPD4Q6W3E5 623 aa17.02■□□□□ 0.32
HDGFL3-203ENST00000563404 TTC7BQ86TV6 843 aa17.02■□□□□ 0.32
HDGFL3-203ENST00000563404 PHACTR4Q8IZ21 702 aa17.02■□□□□ 0.32
HDGFL3-203ENST00000563404 TP53I13Q8NBR0 393 aaPredicted RBP17.02■□□□□ 0.32
HDGFL3-203ENST00000563404 FAM172AQ8WUF8 416 aa17.02■□□□□ 0.32
HDGFL3-203ENST00000563404 KCNE4Q8WWG9 221 aa17.02■□□□□ 0.32
HDGFL3-203ENST00000563404 GBP4Q96PP9 640 aa17.02■□□□□ 0.32
HDGFL3-203ENST00000563404 IL12RB2Q99665 862 aa17.02■□□□□ 0.32
HDGFL3-203ENST00000563404 OSBPL1AQ9BXW6 950 aa17.02■□□□□ 0.32
HDGFL3-203ENST00000563404 NCKIPSDQ9NZQ3 722 aa17.02■□□□□ 0.32
HDGFL3-203ENST00000563404 SPASTQ9UBP0 616 aa17.02■□□□□ 0.32
HDGFL3-203ENST00000563404 APOBEC3BQ9UH17 382 aaKnown RBP17.02■□□□□ 0.32
HDGFL3-203ENST00000563404 HPCAL4Q9UM19 191 aa17.02■□□□□ 0.32
HDGFL3-203ENST00000563404 SSUH2Q9Y2M2 353 aa17.02■□□□□ 0.32
HDGFL3-203ENST00000563404 RP1P56715 2156 aa17.01■□□□□ 0.31
HDGFL3-203ENST00000563404 INSIG1O15503 277 aa17.01■□□□□ 0.31
HDGFL3-203ENST00000563404 BUB1O43683 1085 aa17.01■□□□□ 0.31
HDGFL3-203ENST00000563404 PLA2G2AP14555 144 aa17.01■□□□□ 0.31
HDGFL3-203ENST00000563404 EEF1GP26641 437 aaKnown RBP17.01■□□□□ 0.31
HDGFL3-203ENST00000563404 RFC1P35251 1148 aaPredicted RBP17.01■□□□□ 0.31
HDGFL3-203ENST00000563404 SOX5P35711 763 aa17.01■□□□□ 0.31
HDGFL3-203ENST00000563404 PDX1P52945 283 aa17.01■□□□□ 0.31
HDGFL3-203ENST00000563404 TMPRSS3P57727 454 aa17.01■□□□□ 0.31
HDGFL3-203ENST00000563404 POLR2FP61218 127 aaKnown RBP17.01■□□□□ 0.31
HDGFL3-203ENST00000563404 SKOR1P84550 965 aa17.01■□□□□ 0.31
HDGFL3-203ENST00000563404 NYAP1Q6ZVC0 841 aa17.01■□□□□ 0.31
HDGFL3-203ENST00000563404 BTN2A2Q8WVV5 523 aa17.01■□□□□ 0.31
HDGFL3-203ENST00000563404 NTAN1Q96AB6 310 aa17.01■□□□□ 0.31
HDGFL3-203ENST00000563404 SLC46A1Q96NT5 459 aa17.01■□□□□ 0.31
HDGFL3-203ENST00000563404 TTYH3Q9C0H2 523 aa17.01■□□□□ 0.31
HDGFL3-203ENST00000563404 VPS16Q9H269 839 aa17.01■□□□□ 0.31
HDGFL3-203ENST00000563404 NLRC4Q9NPP4 1024 aa17.01■□□□□ 0.31
HDGFL3-203ENST00000563404 THSD1Q9NS62 852 aa17.01■□□□□ 0.31
HDGFL3-203ENST00000563404 DACH1Q9UI36 760 aa17.01■□□□□ 0.31
HDGFL3-203ENST00000563404 LMO7DNF2Z398 122 aa17■□□□□ 0.31
HDGFL3-203ENST00000563404 ERVH48-1M5A8F1 160 aa17■□□□□ 0.31
HDGFL3-203ENST00000563404 YY2O15391 372 aa17■□□□□ 0.31
HDGFL3-203ENST00000563404 KLK10O43240 276 aa17■□□□□ 0.31
HDGFL3-203ENST00000563404 TM7SF2O76062 418 aa17■□□□□ 0.31
HDGFL3-203ENST00000563404 KRT3P12035 628 aa17■□□□□ 0.31
HDGFL3-203ENST00000563404 TSHRP16473 764 aa17■□□□□ 0.31
HDGFL3-203ENST00000563404 EIF4A3P38919 411 aaKnown RBP17■□□□□ 0.31
HDGFL3-203ENST00000563404 THOP1P52888 689 aa17■□□□□ 0.31
HDGFL3-203ENST00000563404 GSCP56915 257 aaPredicted RBP17■□□□□ 0.31
HDGFL3-203ENST00000563404 YPEL5P62699 121 aa17■□□□□ 0.31
HDGFL3-203ENST00000563404 CFHR1Q03591 330 aa17■□□□□ 0.31
HDGFL3-203ENST00000563404 PTK2BQ14289 1009 aa17■□□□□ 0.31
HDGFL3-203ENST00000563404 KLHL40Q2TBA0 621 aa17■□□□□ 0.31
HDGFL3-203ENST00000563404 C6orf132Q5T0Z8 1188 aa17■□□□□ 0.31
HDGFL3-203ENST00000563404 BROXQ5VW32 411 aa17■□□□□ 0.31
HDGFL3-203ENST00000563404 TENM4Q6N022 2769 aa17■□□□□ 0.31
HDGFL3-203ENST00000563404 WDR59Q6PJI9 974 aa17■□□□□ 0.31
HDGFL3-203ENST00000563404 MACC1Q6ZN28 852 aa17■□□□□ 0.31
HDGFL3-203ENST00000563404 RBM44Q6ZP01 1051 aaKnown RBP17■□□□□ 0.31
HDGFL3-203ENST00000563404 ARHGEF26Q96DR7 871 aa17■□□□□ 0.31
HDGFL3-203ENST00000563404 TBATAQ96M53 351 aa17■□□□□ 0.31
HDGFL3-203ENST00000563404 GDAP1L1Q96MZ0 367 aa17■□□□□ 0.31
HDGFL3-203ENST00000563404 EPAS1Q99814 870 aa17■□□□□ 0.31
HDGFL3-203ENST00000563404 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP17■□□□□ 0.31
HDGFL3-203ENST00000563404 WRAP53Q9BUR4 548 aaKnown RBP17■□□□□ 0.31
HDGFL3-203ENST00000563404 FAM207AQ9NSI2 230 aaPredicted RBP17■□□□□ 0.31
HDGFL3-203ENST00000563404 COQ6Q9Y2Z9 468 aa17■□□□□ 0.31
HDGFL3-203ENST00000563404 ASH1LQ9NR48 2969 aaKnown RBP16.99■□□□□ 0.31
HDGFL3-203ENST00000563404 UCNP55089 124 aa16.99■□□□□ 0.31
HDGFL3-203ENST00000563404 IRF4Q15306 451 aa16.99■□□□□ 0.31
HDGFL3-203ENST00000563404 KRT31Q15323 416 aa16.99■□□□□ 0.31
HDGFL3-203ENST00000563404 CYTH1Q15438 398 aa16.99■□□□□ 0.31
HDGFL3-203ENST00000563404 FAXCQ5TGI0 409 aa16.99■□□□□ 0.31
HDGFL3-203ENST00000563404 CDKAL1Q5VV42 579 aa16.99■□□□□ 0.31
HDGFL3-203ENST00000563404 RTL3Q8N8U3 475 aaKnown RBP16.99■□□□□ 0.31
HDGFL3-203ENST00000563404 TPCN2Q8NHX9 752 aa16.99■□□□□ 0.31
HDGFL3-203ENST00000563404 CXorf40AQ8TE69 158 aa16.99■□□□□ 0.31
HDGFL3-203ENST00000563404 HMCESQ96FZ2 354 aa16.99■□□□□ 0.31
HDGFL3-203ENST00000563404 CCDC3Q9BQI4 270 aa16.99■□□□□ 0.31
HDGFL3-203ENST00000563404 DPH1Q9BZG8 443 aa16.99■□□□□ 0.31
HDGFL3-203ENST00000563404 SEMA4CQ9C0C4 833 aa16.99■□□□□ 0.31
HDGFL3-203ENST00000563404 ADAM22Q9P0K1 906 aa16.99■□□□□ 0.31
HDGFL3-203ENST00000563404 DKK3Q9UBP4 350 aa16.99■□□□□ 0.31
HDGFL3-203ENST00000563404 LHX3Q9UBR4 397 aa16.99■□□□□ 0.31
HDGFL3-203ENST00000563404 SIK3Q9Y2K2 1263 aa16.99■□□□□ 0.31
HDGFL3-203ENST00000563404 MFHAS1Q9Y4C4 1052 aa16.99■□□□□ 0.31
HDGFL3-203ENST00000563404 PCDHGA8Q9Y5G5 932 aa16.99■□□□□ 0.31
HDGFL3-203ENST00000563404 KIF26BQ2KJY2 2108 aa16.99■□□□□ 0.31
HDGFL3-203ENST00000563404 FLNBO75369 2602 aaKnown RBP16.98■□□□□ 0.31
HDGFL3-203ENST00000563404 TCRBV5S1A1TA0A578 114 aa16.98■□□□□ 0.31
HDGFL3-203ENST00000563404 ZSCAN5CA6NGD5 496 aaPredicted RBP16.98■□□□□ 0.31
HDGFL3-203ENST00000563404 CDRT15L2A8MXV6 281 aa16.98■□□□□ 0.31
HDGFL3-203ENST00000563404 RASA4BC9J798 803 aa16.98■□□□□ 0.31
HDGFL3-203ENST00000563404 RIOK3O14730 519 aaKnown RBP16.98■□□□□ 0.31
HDGFL3-203ENST00000563404 CCP110O43303 1012 aa16.98■□□□□ 0.31
HDGFL3-203ENST00000563404 RASA4O43374 803 aa16.98■□□□□ 0.31
HDGFL3-203ENST00000563404 TCEA3O75764 348 aa16.98■□□□□ 0.31
HDGFL3-203ENST00000563404 PIGNO95427 931 aa16.98■□□□□ 0.31
HDGFL3-203ENST00000563404 IGSF6O95976 241 aa16.98■□□□□ 0.31
HDGFL3-203ENST00000563404 ANXA6P08133 673 aa16.98■□□□□ 0.31
HDGFL3-203ENST00000563404 GPD1P21695 349 aa16.98■□□□□ 0.31
HDGFL3-203ENST00000563404 EPHB2P29323 1055 aa16.98■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms