RNA–Protein interactions for RNA: ENST00000562702.2

HDGFL3-202, Transcript of HDGF like 3, humanhuman

TSL 5

Gene HDGFL3, Length 449 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDGFL3-202ENST00000562702 TARSL2A2RTX5 802 aaKnown RBP3.29□□□□□ -1.88
HDGFL3-202ENST00000562702 DDTLA6NHG4 134 aaPredicted RBP3.29□□□□□ -1.88
HDGFL3-202ENST00000562702 EYA2O00167 538 aa3.29□□□□□ -1.88
HDGFL3-202ENST00000562702 HSPB6O14558 160 aa3.29□□□□□ -1.88
HDGFL3-202ENST00000562702 SERPINC1P01008 464 aa3.29□□□□□ -1.88
HDGFL3-202ENST00000562702 LCATP04180 440 aa3.29□□□□□ -1.88
HDGFL3-202ENST00000562702 CHRM4P08173 479 aa3.29□□□□□ -1.88
HDGFL3-202ENST00000562702 PPP3CCP48454 512 aa3.29□□□□□ -1.88
HDGFL3-202ENST00000562702 PDLIM4P50479 330 aa3.29□□□□□ -1.88
HDGFL3-202ENST00000562702 UBE3AQ05086 875 aa3.29□□□□□ -1.88
HDGFL3-202ENST00000562702 TROAPQ12815 778 aa3.29□□□□□ -1.88
HDGFL3-202ENST00000562702 DHX8Q14562 1220 aaKnown RBP3.29□□□□□ -1.88
HDGFL3-202ENST00000562702 TAF12Q16514 161 aa3.29□□□□□ -1.88
HDGFL3-202ENST00000562702 RPE65Q16518 533 aa3.29□□□□□ -1.88
HDGFL3-202ENST00000562702 FSCBQ5H9T9 825 aa3.29□□□□□ -1.88
HDGFL3-202ENST00000562702 C8orf82Q6P1X6 216 aaPredicted RBP3.29□□□□□ -1.88
HDGFL3-202ENST00000562702 TRIM74Q86UV6 250 aa3.29□□□□□ -1.88
HDGFL3-202ENST00000562702 TRIM73Q86UV7 250 aa3.29□□□□□ -1.88
HDGFL3-202ENST00000562702 DNAAF1Q8NEP3 725 aa3.29□□□□□ -1.88
HDGFL3-202ENST00000562702 GFM1Q96RP9 751 aaKnown RBP3.29□□□□□ -1.88
HDGFL3-202ENST00000562702 CXorf56Q9H5V9 222 aa3.29□□□□□ -1.88
HDGFL3-202ENST00000562702 ATP8A2Q9NTI2 1148 aa3.29□□□□□ -1.88
HDGFL3-202ENST00000562702 ALKBH4Q9NXW9 302 aa3.29□□□□□ -1.88
HDGFL3-202ENST00000562702 IFT80Q9P2H3 777 aaPredicted RBP3.29□□□□□ -1.88
HDGFL3-202ENST00000562702 HDAC6Q9UBN7 1215 aa3.29□□□□□ -1.88
HDGFL3-202ENST00000562702 FAM157AC9JC47 383 aa3.28□□□□□ -1.88
HDGFL3-202ENST00000562702 EIF3FO00303 357 aaPredicted RBP3.28□□□□□ -1.88
HDGFL3-202ENST00000562702 ASAP2O43150 1006 aa3.28□□□□□ -1.88
HDGFL3-202ENST00000562702 LIASO43766 372 aa3.28□□□□□ -1.88
HDGFL3-202ENST00000562702 CLDN7O95471 211 aa3.28□□□□□ -1.88
HDGFL3-202ENST00000562702 ADAP00813 363 aa3.28□□□□□ -1.88
HDGFL3-202ENST00000562702 DAOP14920 347 aa3.28□□□□□ -1.88
HDGFL3-202ENST00000562702 GNLYP22749 145 aa3.28□□□□□ -1.88
HDGFL3-202ENST00000562702 PTPN9P43378 593 aa3.28□□□□□ -1.88
HDGFL3-202ENST00000562702 PPM1FP49593 454 aaPredicted RBP3.28□□□□□ -1.88
HDGFL3-202ENST00000562702 ABATP80404 500 aa3.28□□□□□ -1.88
HDGFL3-202ENST00000562702 BIRC3Q13489 604 aa3.28□□□□□ -1.88
HDGFL3-202ENST00000562702 ME3Q16798 604 aa3.28□□□□□ -1.88
HDGFL3-202ENST00000562702 ATG16L1Q676U5 607 aa3.28□□□□□ -1.88
HDGFL3-202ENST00000562702 Q6ZSV7 163 aa3.28□□□□□ -1.88
HDGFL3-202ENST00000562702 PATL1Q86TB9 770 aaKnown RBP3.28□□□□□ -1.88
HDGFL3-202ENST00000562702 LRRTM4Q86VH4 590 aa3.28□□□□□ -1.88
HDGFL3-202ENST00000562702 LMNTD1Q8N9Z9 388 aa3.28□□□□□ -1.88
HDGFL3-202ENST00000562702 ZMIZ2Q8NF64 920 aa3.28□□□□□ -1.88
HDGFL3-202ENST00000562702 CTCFLQ8NI51 663 aaPredicted RBP3.28□□□□□ -1.88
HDGFL3-202ENST00000562702 NOC3LQ8WTT2 800 aaKnown RBP3.28□□□□□ -1.88
HDGFL3-202ENST00000562702 TBC1D22AQ8WUA7 517 aa3.28□□□□□ -1.88
HDGFL3-202ENST00000562702 RAB40AQ8WXH6 277 aa3.28□□□□□ -1.88
HDGFL3-202ENST00000562702 HSPH1Q92598 858 aa3.28□□□□□ -1.88
HDGFL3-202ENST00000562702 CNOT9Q92600 299 aaKnown RBP3.28□□□□□ -1.88
HDGFL3-202ENST00000562702 STAMQ92783 540 aa3.28□□□□□ -1.88
HDGFL3-202ENST00000562702 TAF15Q92804 592 aaKnown RBP eCLIP3.28□□□□□ -1.88
HDGFL3-202ENST00000562702 ATOH1Q92858 354 aaPredicted RBP3.28□□□□□ -1.88
HDGFL3-202ENST00000562702 APOLD1Q96LR9 279 aa3.28□□□□□ -1.88
HDGFL3-202ENST00000562702 REEP2Q9BRK0 252 aa3.28□□□□□ -1.88
HDGFL3-202ENST00000562702 LHPPQ9H008 270 aa3.28□□□□□ -1.88
HDGFL3-202ENST00000562702 RIC8AQ9NPQ8 531 aa3.28□□□□□ -1.88
HDGFL3-202ENST00000562702 NLKQ9UBE8 527 aa3.28□□□□□ -1.88
HDGFL3-202ENST00000562702 IL36RNQ9UBH0 155 aa3.28□□□□□ -1.88
HDGFL3-202ENST00000562702 NESP48681 1621 aa3.27□□□□□ -1.89
HDGFL3-202ENST00000562702 A0A1B0GVY2 172 aa3.27□□□□□ -1.89
HDGFL3-202ENST00000562702 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP3.27□□□□□ -1.89
HDGFL3-202ENST00000562702 FAM90A7PA6NKC0 464 aa3.27□□□□□ -1.89
HDGFL3-202ENST00000562702 SH2D7A6NKC9 451 aaPredicted RBP3.27□□□□□ -1.89
HDGFL3-202ENST00000562702 FAM90A22PA8MWA6 464 aa3.27□□□□□ -1.89
HDGFL3-202ENST00000562702 FAM90A12PA8MX19 464 aa3.27□□□□□ -1.89
HDGFL3-202ENST00000562702 FAM90A23PA8MXZ1 464 aa3.27□□□□□ -1.89
HDGFL3-202ENST00000562702 I6L893 689 aaPredicted RBP3.27□□□□□ -1.89
HDGFL3-202ENST00000562702 BMPR1BO00238 502 aa3.27□□□□□ -1.89
HDGFL3-202ENST00000562702 TPD52L2O43399 206 aaKnown RBP3.27□□□□□ -1.89
HDGFL3-202ENST00000562702 LDB2O43679 373 aa3.27□□□□□ -1.89
HDGFL3-202ENST00000562702 GUCY1B2O75343 617 aa3.27□□□□□ -1.89
HDGFL3-202ENST00000562702 LDLRP01130 860 aa3.27□□□□□ -1.89
HDGFL3-202ENST00000562702 GPD2P43304 727 aa3.27□□□□□ -1.89
HDGFL3-202ENST00000562702 BLKP51451 505 aa3.27□□□□□ -1.89
HDGFL3-202ENST00000562702 ARSFP54793 590 aa3.27□□□□□ -1.89
HDGFL3-202ENST00000562702 TRAF1Q13077 416 aa3.27□□□□□ -1.89
HDGFL3-202ENST00000562702 SLC18A3Q16572 532 aa3.27□□□□□ -1.89
HDGFL3-202ENST00000562702 WDR45BQ5MNZ6 344 aa3.27□□□□□ -1.89
HDGFL3-202ENST00000562702 NAPEPLDQ6IQ20 393 aa3.27□□□□□ -1.89
HDGFL3-202ENST00000562702 IL20RBQ6UXL0 311 aa3.27□□□□□ -1.89
HDGFL3-202ENST00000562702 BBS12Q6ZW61 710 aa3.27□□□□□ -1.89
HDGFL3-202ENST00000562702 MON1BQ7L1V2 547 aa3.27□□□□□ -1.89
HDGFL3-202ENST00000562702 ZNF367Q7RTV3 350 aa3.27□□□□□ -1.89
HDGFL3-202ENST00000562702 FJX1Q86VR8 437 aa3.27□□□□□ -1.89
HDGFL3-202ENST00000562702 RBFAQ8N0V3 343 aa3.27□□□□□ -1.89
HDGFL3-202ENST00000562702 CPXCR1Q8N123 301 aa3.27□□□□□ -1.89
HDGFL3-202ENST00000562702 CLIP4Q8N3C7 705 aa3.27□□□□□ -1.89
HDGFL3-202ENST00000562702 TEX45Q8NA69 505 aa3.27□□□□□ -1.89
HDGFL3-202ENST00000562702 OR4N2Q8NGD1 307 aa3.27□□□□□ -1.89
HDGFL3-202ENST00000562702 OR14A16Q8NHC5 309 aa3.27□□□□□ -1.89
HDGFL3-202ENST00000562702 RFWD2Q8NHY2 731 aa3.27□□□□□ -1.89
HDGFL3-202ENST00000562702 FAM216AQ8WUB2 273 aa3.27□□□□□ -1.89
HDGFL3-202ENST00000562702 HERVK_113Q902F9 699 aa3.27□□□□□ -1.89
HDGFL3-202ENST00000562702 TMEM18Q96B42 140 aa3.27□□□□□ -1.89
HDGFL3-202ENST00000562702 TAOK3Q9H2K8 898 aa3.27□□□□□ -1.89
HDGFL3-202ENST00000562702 MROH8Q9H579 483 aa3.27□□□□□ -1.89
HDGFL3-202ENST00000562702 EPHX3Q9H6B9 360 aa3.27□□□□□ -1.89
HDGFL3-202ENST00000562702 PCDHAC2Q9Y5I4 1007 aa3.27□□□□□ -1.89
HDGFL3-202ENST00000562702 RAI2Q9Y5P3 530 aa3.27□□□□□ -1.89
Retrieved 100 of 20,778 RNA–protein pairs in 54.5 ms