RNA–Protein interactions for RNA: ENST00000561960.5

NSMCE1-202, Transcript of NSE1 homolog, SMC5-SMC6 complex component, humanhuman

TSL 3

Gene NSMCE1, Length 609 nt, Biotype retained intron, Subcellular localisation Cytosol, Exosome, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NSMCE1-202ENST00000561960 PCDH20Q8N6Y1 951 aaKnown RBP11.85□□□□□ -0.51
NSMCE1-202ENST00000561960 SNRNP27Q8WVK2 155 aaKnown RBP11.85□□□□□ -0.51
NSMCE1-202ENST00000561960 VOPP1Q96AW1 172 aa11.85□□□□□ -0.51
NSMCE1-202ENST00000561960 CENPTQ96BT3 561 aa11.85□□□□□ -0.51
NSMCE1-202ENST00000561960 KLC2Q9H0B6 622 aa11.85□□□□□ -0.51
NSMCE1-202ENST00000561960 PDCL3Q9H2J4 239 aa11.85□□□□□ -0.51
NSMCE1-202ENST00000561960 USP29Q9HBJ7 922 aa11.85□□□□□ -0.51
NSMCE1-202ENST00000561960 SIX2Q9NPC8 291 aa11.85□□□□□ -0.51
NSMCE1-202ENST00000561960 ASNSD1Q9NWL6 643 aa11.85□□□□□ -0.51
NSMCE1-202ENST00000561960 SALL4Q9UJQ4 1053 aa11.85□□□□□ -0.51
NSMCE1-202ENST00000561960 GPR34Q9UPC5 381 aa11.85□□□□□ -0.51
NSMCE1-202ENST00000561960 CSNK1G3Q9Y6M4 447 aa11.85□□□□□ -0.51
NSMCE1-202ENST00000561960 D6RAR5 112 aa11.84□□□□□ -0.51
NSMCE1-202ENST00000561960 LMO7DNF2Z398 122 aa11.84□□□□□ -0.51
NSMCE1-202ENST00000561960 ITGA2BP08514 1039 aa11.84□□□□□ -0.51
NSMCE1-202ENST00000561960 JMJD7P0C870 316 aa11.84□□□□□ -0.51
NSMCE1-202ENST00000561960 RPIAP49247 311 aa11.84□□□□□ -0.51
NSMCE1-202ENST00000561960 CSRP3P50461 194 aa11.84□□□□□ -0.51
NSMCE1-202ENST00000561960 CLCN6P51797 869 aa11.84□□□□□ -0.51
NSMCE1-202ENST00000561960 INHBCP55103 352 aa11.84□□□□□ -0.51
NSMCE1-202ENST00000561960 PPARDQ03181 441 aa11.84□□□□□ -0.51
NSMCE1-202ENST00000561960 CLCA4Q14CN2 919 aa11.84□□□□□ -0.51
NSMCE1-202ENST00000561960 ALG11Q2TAA5 492 aa11.84□□□□□ -0.51
NSMCE1-202ENST00000561960 ZNF805Q5CZA5 627 aa11.84□□□□□ -0.51
NSMCE1-202ENST00000561960 BRMS1LQ5PSV4 323 aa11.84□□□□□ -0.51
NSMCE1-202ENST00000561960 RETSATQ6NUM9 610 aa11.84□□□□□ -0.51
NSMCE1-202ENST00000561960 ESRP1Q6NXG1 681 aaKnown RBP11.84□□□□□ -0.51
NSMCE1-202ENST00000561960 ENPP7Q6UWV6 458 aa11.84□□□□□ -0.51
NSMCE1-202ENST00000561960 TTC7BQ86TV6 843 aa11.84□□□□□ -0.51
NSMCE1-202ENST00000561960 XYLT1Q86Y38 959 aa11.84□□□□□ -0.51
NSMCE1-202ENST00000561960 TP53I13Q8NBR0 393 aaPredicted RBP11.84□□□□□ -0.51
NSMCE1-202ENST00000561960 CXorf40AQ8TE69 158 aa11.84□□□□□ -0.51
NSMCE1-202ENST00000561960 HTR3CQ8WXA8 447 aa11.84□□□□□ -0.51
NSMCE1-202ENST00000561960 CPA5Q8WXQ8 436 aa11.84□□□□□ -0.51
NSMCE1-202ENST00000561960 SHC3Q92529 594 aa11.84□□□□□ -0.51
NSMCE1-202ENST00000561960 PMEPA1Q969W9 287 aa11.84□□□□□ -0.51
NSMCE1-202ENST00000561960 CCDC97Q96F63 343 aaPredicted RBP11.84□□□□□ -0.51
NSMCE1-202ENST00000561960 PDXPQ96GD0 296 aa11.84□□□□□ -0.51
NSMCE1-202ENST00000561960 ZYG11BQ9C0D3 744 aa11.84□□□□□ -0.51
NSMCE1-202ENST00000561960 MRPL40Q9NQ50 206 aaKnown RBP11.84□□□□□ -0.51
NSMCE1-202ENST00000561960 METTL5Q9NRN9 209 aaKnown RBP11.84□□□□□ -0.51
NSMCE1-202ENST00000561960 APEX2Q9UBZ4 518 aa11.84□□□□□ -0.51
NSMCE1-202ENST00000561960 DNAJC12Q9UKB3 198 aa11.84□□□□□ -0.51
NSMCE1-202ENST00000561960 PCDHGC3Q9UN70 934 aa11.84□□□□□ -0.51
NSMCE1-202ENST00000561960 LOXL2Q9Y4K0 774 aa11.84□□□□□ -0.51
NSMCE1-202ENST00000561960 IGLV3-10A0A075B6K4 115 aa11.83□□□□□ -0.52
NSMCE1-202ENST00000561960 BICDL2A1A5D9 508 aa11.83□□□□□ -0.52
NSMCE1-202ENST00000561960 ILVBLA1L0T0 632 aa11.83□□□□□ -0.52
NSMCE1-202ENST00000561960 B4DGG1 531 aa11.83□□□□□ -0.52
NSMCE1-202ENST00000561960 NTN3O00634 580 aaPredicted RBP11.83□□□□□ -0.52
NSMCE1-202ENST00000561960 AP1G1O43747 822 aa11.83□□□□□ -0.52
NSMCE1-202ENST00000561960 GADD45BO75293 160 aaPredicted RBP11.83□□□□□ -0.52
NSMCE1-202ENST00000561960 TCEA3O75764 348 aa11.83□□□□□ -0.52
NSMCE1-202ENST00000561960 CTSEP14091 401 aa11.83□□□□□ -0.52
NSMCE1-202ENST00000561960 ITGB6P18564 788 aa11.83□□□□□ -0.52
NSMCE1-202ENST00000561960 PON1P27169 355 aa11.83□□□□□ -0.52
NSMCE1-202ENST00000561960 RAPGEF1Q13905 1077 aa11.83□□□□□ -0.52
NSMCE1-202ENST00000561960 MORC3Q14149 939 aa11.83□□□□□ -0.52
NSMCE1-202ENST00000561960 TBR1Q16650 682 aa11.83□□□□□ -0.52
NSMCE1-202ENST00000561960 PHF19Q5T6S3 580 aa11.83□□□□□ -0.52
NSMCE1-202ENST00000561960 IGF2-ASQ6U949 168 aa11.83□□□□□ -0.52
NSMCE1-202ENST00000561960 MACC1Q6ZN28 852 aa11.83□□□□□ -0.52
NSMCE1-202ENST00000561960 GBP6Q6ZN66 633 aa11.83□□□□□ -0.52
NSMCE1-202ENST00000561960 PLA2G15Q8NCC3 412 aa11.83□□□□□ -0.52
NSMCE1-202ENST00000561960 RCBTB1Q8NDN9 531 aa11.83□□□□□ -0.52
NSMCE1-202ENST00000561960 GLMNQ92990 594 aa11.83□□□□□ -0.52
NSMCE1-202ENST00000561960 USP7Q93009 1102 aa11.83□□□□□ -0.52
NSMCE1-202ENST00000561960 NAT6Q93015 286 aa11.83□□□□□ -0.52
NSMCE1-202ENST00000561960 SGF29Q96ES7 293 aa11.83□□□□□ -0.52
NSMCE1-202ENST00000561960 LENG8Q96PV6 779 aaPredicted RBP11.83□□□□□ -0.52
NSMCE1-202ENST00000561960 STAP1Q9ULZ2 295 aa11.83□□□□□ -0.52
NSMCE1-202ENST00000561960 DAAM1Q9Y4D1 1078 aa11.83□□□□□ -0.52
NSMCE1-202ENST00000561960 PCDHGA4Q9Y5G9 962 aa11.83□□□□□ -0.52
NSMCE1-202ENST00000561960 LRRK2Q5S007 2527 aa11.83□□□□□ -0.52
NSMCE1-202ENST00000561960 A8MX80 341 aa11.82□□□□□ -0.52
NSMCE1-202ENST00000561960 TERTO14746 1132 aaKnown RBP11.82□□□□□ -0.52
NSMCE1-202ENST00000561960 TPP1O14773 563 aa11.82□□□□□ -0.52
NSMCE1-202ENST00000561960 TSPAN6O43657 245 aa11.82□□□□□ -0.52
NSMCE1-202ENST00000561960 BUB1O43683 1085 aa11.82□□□□□ -0.52
NSMCE1-202ENST00000561960 LZTS3O60299 673 aaPredicted RBP11.82□□□□□ -0.52
NSMCE1-202ENST00000561960 TM7SF2O76062 418 aa11.82□□□□□ -0.52
NSMCE1-202ENST00000561960 TMCC1O94876 653 aa11.82□□□□□ -0.52
NSMCE1-202ENST00000561960 PTK2Q05397 1052 aa11.82□□□□□ -0.52
NSMCE1-202ENST00000561960 SRSF1Q07955 248 aaKnown RBP eCLIP11.82□□□□□ -0.52
NSMCE1-202ENST00000561960 PTK2BQ14289 1009 aa11.82□□□□□ -0.52
NSMCE1-202ENST00000561960 INPP5AQ14642 412 aa11.82□□□□□ -0.52
NSMCE1-202ENST00000561960 MEA1Q16626 185 aa11.82□□□□□ -0.52
NSMCE1-202ENST00000561960 EXOC3L4Q17RC7 722 aa11.82□□□□□ -0.52
NSMCE1-202ENST00000561960 SKIDA1Q1XH10 827 aa11.82□□□□□ -0.52
NSMCE1-202ENST00000561960 MYLK3Q32MK0 819 aa11.82□□□□□ -0.52
NSMCE1-202ENST00000561960 SLC25A52Q3SY17 297 aa11.82□□□□□ -0.52
NSMCE1-202ENST00000561960 AMZ1Q400G9 498 aa11.82□□□□□ -0.52
NSMCE1-202ENST00000561960 MANEAQ5SRI9 462 aa11.82□□□□□ -0.52
NSMCE1-202ENST00000561960 GDPD4Q6W3E5 623 aa11.82□□□□□ -0.52
NSMCE1-202ENST00000561960 PYROXD2Q8N2H3 581 aa11.82□□□□□ -0.52
NSMCE1-202ENST00000561960 CCDC185Q8N715 623 aa11.82□□□□□ -0.52
NSMCE1-202ENST00000561960 ARL10Q8N8L6 244 aa11.82□□□□□ -0.52
NSMCE1-202ENST00000561960 OR2AP1Q8NGE2 309 aa11.82□□□□□ -0.52
NSMCE1-202ENST00000561960 CCL4L1Q8NHW4 92 aa11.82□□□□□ -0.52
NSMCE1-202ENST00000561960 BTN2A2Q8WVV5 523 aa11.82□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms