RNA–Protein interactions for RNA: ENST00000560371.5

TRAF3-208, Transcript of TNF receptor associated factor 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRAF3, Length 7,640 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF3-208ENST00000560371 CLCNKBP51801 687 aa13.56□□□□□ -0.24
TRAF3-208ENST00000560371 IL17AQ16552 155 aa13.56□□□□□ -0.24
TRAF3-208ENST00000560371 C16orf46Q6P387 395 aa13.56□□□□□ -0.24
TRAF3-208ENST00000560371 FAM151BQ6UXP7 276 aa13.56□□□□□ -0.24
TRAF3-208ENST00000560371 STRADAQ7RTN6 431 aa13.56□□□□□ -0.24
TRAF3-208ENST00000560371 POLNQ7Z5Q5 900 aa13.56□□□□□ -0.24
TRAF3-208ENST00000560371 PHYKPLQ8IUZ5 450 aa13.56□□□□□ -0.24
TRAF3-208ENST00000560371 ACTRT2Q8TDY3 377 aa13.56□□□□□ -0.24
TRAF3-208ENST00000560371 GLMNQ92990 594 aa13.56□□□□□ -0.24
TRAF3-208ENST00000560371 NDNQ99608 321 aa13.56□□□□□ -0.24
TRAF3-208ENST00000560371 BCL2L14Q9BZR8 327 aa13.56□□□□□ -0.24
TRAF3-208ENST00000560371 FANCEQ9HB96 536 aa13.56□□□□□ -0.24
TRAF3-208ENST00000560371 MYO7AQ13402 2215 aa13.56□□□□□ -0.24
TRAF3-208ENST00000560371 ZNF24P17028 368 aa13.56□□□□□ -0.24
TRAF3-208ENST00000560371 STX4Q12846 297 aa13.56□□□□□ -0.24
TRAF3-208ENST00000560371 AADACL2Q6P093 401 aa13.56□□□□□ -0.24
TRAF3-208ENST00000560371 MTMR14Q8NCE2 650 aa13.56□□□□□ -0.24
TRAF3-208ENST00000560371 LGMNQ99538 433 aa13.56□□□□□ -0.24
TRAF3-208ENST00000560371 GMIPQ9P107 970 aa13.56□□□□□ -0.24
TRAF3-208ENST00000560371 SLC12A4Q9UP95 1085 aa13.56□□□□□ -0.24
TRAF3-208ENST00000560371 LYPLA2O95372 231 aa13.56□□□□□ -0.24
TRAF3-208ENST00000560371 ACADSP16219 412 aa13.56□□□□□ -0.24
TRAF3-208ENST00000560371 TALDO1P37837 337 aa13.56□□□□□ -0.24
TRAF3-208ENST00000560371 XKR6Q5GH73 641 aa13.56□□□□□ -0.24
TRAF3-208ENST00000560371 EPHX4Q8IUS5 362 aa13.56□□□□□ -0.24
TRAF3-208ENST00000560371 ZFP28Q8NHY6 868 aa13.56□□□□□ -0.24
TRAF3-208ENST00000560371 MAF1Q9H063 256 aa13.56□□□□□ -0.24
TRAF3-208ENST00000560371 SLC40A1Q9NP59 571 aa13.56□□□□□ -0.24
TRAF3-208ENST00000560371 N6AMT1Q9Y5N5 214 aa13.56□□□□□ -0.24
TRAF3-208ENST00000560371 ULK1O75385 1050 aa13.56□□□□□ -0.24
TRAF3-208ENST00000560371 ERVK-21P61565 698 aa13.56□□□□□ -0.24
TRAF3-208ENST00000560371 ATP13A4Q4VNC1 1196 aa13.56□□□□□ -0.24
TRAF3-208ENST00000560371 TCHHL1Q5QJ38 904 aaPredicted RBP13.56□□□□□ -0.24
TRAF3-208ENST00000560371 INTS11Q5TA45 600 aaKnown RBP13.56□□□□□ -0.24
TRAF3-208ENST00000560371 PSRC1Q6PGN9 363 aaPredicted RBP13.56□□□□□ -0.24
TRAF3-208ENST00000560371 TBCDQ9BTW9 1192 aa13.56□□□□□ -0.24
TRAF3-208ENST00000560371 FKBP6O75344 327 aa13.56□□□□□ -0.24
TRAF3-208ENST00000560371 AVILO75366 819 aa13.56□□□□□ -0.24
TRAF3-208ENST00000560371 MYL12AP19105 171 aa13.56□□□□□ -0.24
TRAF3-208ENST00000560371 TFEBP19484 476 aa13.56□□□□□ -0.24
TRAF3-208ENST00000560371 AIF1P55008 147 aa13.56□□□□□ -0.24
TRAF3-208ENST00000560371 NOMO3P69849 1222 aa13.56□□□□□ -0.24
TRAF3-208ENST00000560371 SNAP47Q5SQN1 464 aa13.56□□□□□ -0.24
TRAF3-208ENST00000560371 ZNF75CPQ92670 426 aaPredicted RBP13.56□□□□□ -0.24
TRAF3-208ENST00000560371 RNFT2Q96EX2 444 aa13.56□□□□□ -0.24
TRAF3-208ENST00000560371 RNF145Q96MT1 663 aa13.56□□□□□ -0.24
TRAF3-208ENST00000560371 KLHL4Q9C0H6 718 aa13.56□□□□□ -0.24
TRAF3-208ENST00000560371 INTS7Q9NVH2 962 aaKnown RBP13.56□□□□□ -0.24
TRAF3-208ENST00000560371 CLIC5Q9NZA1 410 aa13.56□□□□□ -0.24
TRAF3-208ENST00000560371 DLGAP2Q9P1A6 1054 aa13.56□□□□□ -0.24
TRAF3-208ENST00000560371 CLUHO75153 1309 aa13.55□□□□□ -0.24
TRAF3-208ENST00000560371 ST3GAL1Q11201 340 aa13.55□□□□□ -0.24
TRAF3-208ENST00000560371 ARSHQ5FYA8 562 aa13.55□□□□□ -0.24
TRAF3-208ENST00000560371 GPR141Q7Z602 305 aa13.55□□□□□ -0.24
TRAF3-208ENST00000560371 FAM20CQ8IXL6 584 aa13.55□□□□□ -0.24
TRAF3-208ENST00000560371 TTLL2Q9BWV7 592 aa13.55□□□□□ -0.24
TRAF3-208ENST00000560371 CEP44Q9C0F1 390 aa13.55□□□□□ -0.24
TRAF3-208ENST00000560371 VPS45Q9NRW7 570 aa13.55□□□□□ -0.24
TRAF3-208ENST00000560371 LIASO43766 372 aa13.55□□□□□ -0.24
TRAF3-208ENST00000560371 ERBB2P04626 1255 aa13.55□□□□□ -0.24
TRAF3-208ENST00000560371 ZFP14Q9HCL3 533 aa13.55□□□□□ -0.24
TRAF3-208ENST00000560371 GPN3Q9UHW5 284 aaPredicted RBP13.55□□□□□ -0.24
TRAF3-208ENST00000560371 KNTC1P50748 2209 aa13.55□□□□□ -0.24
TRAF3-208ENST00000560371 RNASEH2AO75792 299 aaKnown RBP13.55□□□□□ -0.24
TRAF3-208ENST00000560371 KCNH1O95259 989 aa13.55□□□□□ -0.24
TRAF3-208ENST00000560371 RPL3P39023 403 aaKnown RBP13.55□□□□□ -0.24
TRAF3-208ENST00000560371 CRATP43155 626 aa13.55□□□□□ -0.24
TRAF3-208ENST00000560371 TCF25Q9BQ70 676 aa13.55□□□□□ -0.24
TRAF3-208ENST00000560371 SLC4A5Q9BY07 1137 aa13.55□□□□□ -0.24
TRAF3-208ENST00000560371 B3GNT5Q9BYG0 378 aa13.55□□□□□ -0.24
TRAF3-208ENST00000560371 RSPH9Q9H1X1 276 aaPredicted RBP13.55□□□□□ -0.24
TRAF3-208ENST00000560371 FFAR3O14843 346 aa13.55□□□□□ -0.24
TRAF3-208ENST00000560371 GPR42O15529 346 aa13.55□□□□□ -0.24
TRAF3-208ENST00000560371 PRKCZQ05513 592 aa13.55□□□□□ -0.24
TRAF3-208ENST00000560371 LRRC55Q6ZSA7 311 aa13.55□□□□□ -0.24
TRAF3-208ENST00000560371 DHFR2Q86XF0 187 aa13.55□□□□□ -0.24
TRAF3-208ENST00000560371 OR4L1Q8NH43 312 aa13.55□□□□□ -0.24
TRAF3-208ENST00000560371 IMP3Q9NV31 184 aaKnown RBP13.55□□□□□ -0.24
TRAF3-208ENST00000560371 VAV3Q9UKW4 847 aa13.55□□□□□ -0.24
TRAF3-208ENST00000560371 DUSP12Q9UNI6 340 aa13.55□□□□□ -0.24
TRAF3-208ENST00000560371 ARIH1Q9Y4X5 557 aaPredicted RBP13.55□□□□□ -0.24
TRAF3-208ENST00000560371 A0A0G2JLL6 359 aaPredicted RBP13.55□□□□□ -0.24
TRAF3-208ENST00000560371 CD3EAPO15446 510 aaKnown RBP13.55□□□□□ -0.24
TRAF3-208ENST00000560371 AP5B1Q2VPB7 878 aa13.55□□□□□ -0.24
TRAF3-208ENST00000560371 PRRT2Q7Z6L0 340 aaPredicted RBP13.55□□□□□ -0.24
TRAF3-208ENST00000560371 TMPRSS6Q8IU80 811 aa13.55□□□□□ -0.24
TRAF3-208ENST00000560371 NPAS4Q8IUM7 802 aa13.55□□□□□ -0.24
TRAF3-208ENST00000560371 MRPS17Q9Y2R5 130 aaKnown RBP13.55□□□□□ -0.24
TRAF3-208ENST00000560371 A0A1B0GW55 424 aa13.55□□□□□ -0.24
TRAF3-208ENST00000560371 ARL5CA6NH57 179 aa13.55□□□□□ -0.24
TRAF3-208ENST00000560371 UBOX5O94941 541 aa13.55□□□□□ -0.24
TRAF3-208ENST00000560371 DUX4L2P0CJ85 424 aa13.55□□□□□ -0.24
TRAF3-208ENST00000560371 DUX4L3P0CJ86 424 aa13.55□□□□□ -0.24
TRAF3-208ENST00000560371 DUX4L4P0CJ87 422 aa13.55□□□□□ -0.24
TRAF3-208ENST00000560371 DUX4L5P0CJ88 424 aa13.55□□□□□ -0.24
TRAF3-208ENST00000560371 DUX4L6P0CJ89 424 aa13.55□□□□□ -0.24
TRAF3-208ENST00000560371 DUX4L7P0CJ90 424 aa13.55□□□□□ -0.24
TRAF3-208ENST00000560371 SERPINB1P30740 379 aa13.55□□□□□ -0.24
TRAF3-208ENST00000560371 SCTRP47872 440 aa13.55□□□□□ -0.24
TRAF3-208ENST00000560371 GSSP48637 474 aa13.55□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 96.4 ms