RNA–Protein interactions for RNA: ENST00000560175.5

SMAD3-213, Transcript of SMAD family member 3, humanhuman

TSL 4

Gene SMAD3, Length 542 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD3-213ENST00000560175 DKK1O94907 266 aa13.37□□□□□ -0.27
SMAD3-213ENST00000560175 PCDH8O95206 1070 aa13.37□□□□□ -0.27
SMAD3-213ENST00000560175 KRT7P08729 469 aa13.37□□□□□ -0.27
SMAD3-213ENST00000560175 HNRNPA2B1P22626 353 aaKnown RBP13.37□□□□□ -0.27
SMAD3-213ENST00000560175 RGRP47804 291 aa13.37□□□□□ -0.27
SMAD3-213ENST00000560175 CDH6P55285 790 aa13.37□□□□□ -0.27
SMAD3-213ENST00000560175 C21orf59P57076 290 aa13.37□□□□□ -0.27
SMAD3-213ENST00000560175 FAM193AP78312 1265 aa13.37□□□□□ -0.27
SMAD3-213ENST00000560175 STAT4Q14765 748 aa13.37□□□□□ -0.27
SMAD3-213ENST00000560175 SUZ12Q15022 739 aaKnown RBP13.37□□□□□ -0.27
SMAD3-213ENST00000560175 SLC45A4Q5BKX6 768 aa13.37□□□□□ -0.27
SMAD3-213ENST00000560175 KANSL1Q7Z3B3 1105 aa13.37□□□□□ -0.27
SMAD3-213ENST00000560175 ADAT2Q7Z6V5 191 aaKnown RBP13.37□□□□□ -0.27
SMAD3-213ENST00000560175 SRLQ86TD4 932 aa13.37□□□□□ -0.27
SMAD3-213ENST00000560175 NAXDQ8IW45 347 aa13.37□□□□□ -0.27
SMAD3-213ENST00000560175 CCDC170Q8IYT3 715 aa13.37□□□□□ -0.27
SMAD3-213ENST00000560175 NETO2Q8NC67 525 aa13.37□□□□□ -0.27
SMAD3-213ENST00000560175 PCDH19Q8TAB3 1148 aa13.37□□□□□ -0.27
SMAD3-213ENST00000560175 RFFLQ8WZ73 363 aa13.37□□□□□ -0.27
SMAD3-213ENST00000560175 FATE1Q969F0 183 aa13.37□□□□□ -0.27
SMAD3-213ENST00000560175 BMFQ96LC9 184 aa13.37□□□□□ -0.27
SMAD3-213ENST00000560175 PANX2Q96RD6 677 aa13.37□□□□□ -0.27
SMAD3-213ENST00000560175 ZNF670Q9BS34 389 aa13.37□□□□□ -0.27
SMAD3-213ENST00000560175 AASDHPPTQ9NRN7 309 aa13.37□□□□□ -0.27
SMAD3-213ENST00000560175 TPRP12270 2363 aaKnown RBP13.36□□□□□ -0.27
SMAD3-213ENST00000560175 DFFAO00273 331 aa13.36□□□□□ -0.27
SMAD3-213ENST00000560175 TRAFD1O14545 582 aaPredicted RBP13.36□□□□□ -0.27
SMAD3-213ENST00000560175 MUSKO15146 869 aa13.36□□□□□ -0.27
SMAD3-213ENST00000560175 SLC31A1O15431 190 aa13.36□□□□□ -0.27
SMAD3-213ENST00000560175 FLRT2O43155 660 aa13.36□□□□□ -0.27
SMAD3-213ENST00000560175 PAK4O96013 591 aaPredicted RBP13.36□□□□□ -0.27
SMAD3-213ENST00000560175 SERPINB6P35237 376 aa13.36□□□□□ -0.27
SMAD3-213ENST00000560175 SLC10A7Q0GE19 358 aa13.36□□□□□ -0.27
SMAD3-213ENST00000560175 MMRN1Q13201 1228 aa13.36□□□□□ -0.27
SMAD3-213ENST00000560175 LBRQ14739 615 aaKnown RBP13.36□□□□□ -0.27
SMAD3-213ENST00000560175 AGERQ15109 404 aa13.36□□□□□ -0.27
SMAD3-213ENST00000560175 TMEM52BQ4KMG9 183 aa13.36□□□□□ -0.27
SMAD3-213ENST00000560175 ANKRD20A8PQ5CZ79 823 aa13.36□□□□□ -0.27
SMAD3-213ENST00000560175 LRRC38Q5VT99 294 aa13.36□□□□□ -0.27
SMAD3-213ENST00000560175 SEL1L3Q68CR1 1132 aa13.36□□□□□ -0.27
SMAD3-213ENST00000560175 BRAT1Q6PJG6 821 aa13.36□□□□□ -0.27
SMAD3-213ENST00000560175 TTC7BQ86TV6 843 aa13.36□□□□□ -0.27
SMAD3-213ENST00000560175 MAP7D3Q8IWC1 876 aa13.36□□□□□ -0.27
SMAD3-213ENST00000560175 RYBPQ8N488 228 aaPredicted RBP13.36□□□□□ -0.27
SMAD3-213ENST00000560175 OXR1Q8N573 874 aa13.36□□□□□ -0.27
SMAD3-213ENST00000560175 TEX26Q8N6G2 289 aa13.36□□□□□ -0.27
SMAD3-213ENST00000560175 SAP25Q8TEE9 199 aa13.36□□□□□ -0.27
SMAD3-213ENST00000560175 CENPTQ96BT3 561 aa13.36□□□□□ -0.27
SMAD3-213ENST00000560175 CAMK1GQ96NX5 476 aa13.36□□□□□ -0.27
SMAD3-213ENST00000560175 TSGA13Q96PP4 275 aa13.36□□□□□ -0.27
SMAD3-213ENST00000560175 SP110Q9HB58 689 aa13.36□□□□□ -0.27
SMAD3-213ENST00000560175 GDF3Q9NR23 364 aa13.36□□□□□ -0.27
SMAD3-213ENST00000560175 SEPT3Q9UH03 358 aa13.36□□□□□ -0.27
SMAD3-213ENST00000560175 CFAP69A5D8W1 941 aa13.35□□□□□ -0.27
SMAD3-213ENST00000560175 FAM221BA6H8Z2 402 aa13.35□□□□□ -0.27
SMAD3-213ENST00000560175 C3orf70A6NLC5 250 aaPredicted RBP13.35□□□□□ -0.27
SMAD3-213ENST00000560175 YKT6O15498 198 aa13.35□□□□□ -0.27
SMAD3-213ENST00000560175 KDELR1P24390 212 aa13.35□□□□□ -0.27
SMAD3-213ENST00000560175 AKT2P31751 481 aa13.35□□□□□ -0.27
SMAD3-213ENST00000560175 HSPA9P38646 679 aaKnown RBP13.35□□□□□ -0.27
SMAD3-213ENST00000560175 SLC1A1P43005 524 aa13.35□□□□□ -0.27
SMAD3-213ENST00000560175 CCT8P50990 548 aa13.35□□□□□ -0.27
SMAD3-213ENST00000560175 RENBPP51606 427 aa13.35□□□□□ -0.27
SMAD3-213ENST00000560175 GALNT2Q10471 571 aa13.35□□□□□ -0.27
SMAD3-213ENST00000560175 MESDQ14696 234 aa13.35□□□□□ -0.27
SMAD3-213ENST00000560175 TRIP6Q15654 476 aaKnown RBP13.35□□□□□ -0.27
SMAD3-213ENST00000560175 UGP2Q16851 508 aa13.35□□□□□ -0.27
SMAD3-213ENST00000560175 RALGPS1Q5JS13 557 aa13.35□□□□□ -0.27
SMAD3-213ENST00000560175 NCBP2-AS2Q69YL0 99 aa13.35□□□□□ -0.27
SMAD3-213ENST00000560175 GCNT7Q6ZNI0 430 aa13.35□□□□□ -0.27
SMAD3-213ENST00000560175 DCP2Q8IU60 420 aaKnown RBP13.35□□□□□ -0.27
SMAD3-213ENST00000560175 PQLC3Q8N755 202 aa13.35□□□□□ -0.27
SMAD3-213ENST00000560175 KCTD6Q8NC69 237 aa13.35□□□□□ -0.27
SMAD3-213ENST00000560175 DENND6BQ8NEG7 585 aa13.35□□□□□ -0.27
SMAD3-213ENST00000560175 MAML1Q92585 1016 aa13.35□□□□□ -0.27
SMAD3-213ENST00000560175 KLK6Q92876 244 aa13.35□□□□□ -0.27
SMAD3-213ENST00000560175 IFT43Q96FT9 208 aa13.35□□□□□ -0.27
SMAD3-213ENST00000560175 KLHDC7BQ96G42 594 aa13.35□□□□□ -0.27
SMAD3-213ENST00000560175 EXOC2Q96KP1 924 aa13.35□□□□□ -0.27
SMAD3-213ENST00000560175 RNF157Q96PX1 679 aa13.35□□□□□ -0.27
SMAD3-213ENST00000560175 GGT7Q9UJ14 662 aa13.35□□□□□ -0.27
SMAD3-213ENST00000560175 TDRD6O60522 2096 aaKnown RBP13.35□□□□□ -0.27
SMAD3-213ENST00000560175 ACACBO00763 2458 aa13.34□□□□□ -0.27
SMAD3-213ENST00000560175 A0A0A6YYK5 440 aaPredicted RBP13.34□□□□□ -0.27
SMAD3-213ENST00000560175 POM121BA6NF01 834 aa13.34□□□□□ -0.27
SMAD3-213ENST00000560175 IGLON5A6NGN9 336 aa13.34□□□□□ -0.27
SMAD3-213ENST00000560175 RIOK3O14730 519 aaKnown RBP13.34□□□□□ -0.27
SMAD3-213ENST00000560175 RAD51BO15315 384 aa13.34□□□□□ -0.27
SMAD3-213ENST00000560175 HTRA2O43464 458 aaPredicted RBP13.34□□□□□ -0.27
SMAD3-213ENST00000560175 PIGNO95427 931 aa13.34□□□□□ -0.27
SMAD3-213ENST00000560175 PRLRP16471 622 aa13.34□□□□□ -0.27
SMAD3-213ENST00000560175 GARSP41250 739 aaKnown RBP13.34□□□□□ -0.27
SMAD3-213ENST00000560175 MAGEA1P43355 309 aa13.34□□□□□ -0.27
SMAD3-213ENST00000560175 AP1S1P61966 158 aa13.34□□□□□ -0.27
SMAD3-213ENST00000560175 SLC10A2Q12908 348 aaPredicted RBP13.34□□□□□ -0.27
SMAD3-213ENST00000560175 KRT81Q14533 505 aa13.34□□□□□ -0.27
SMAD3-213ENST00000560175 TAZQ16635 292 aa13.34□□□□□ -0.27
SMAD3-213ENST00000560175 ALG1LQ6GMV1 187 aa13.34□□□□□ -0.27
SMAD3-213ENST00000560175 ZSWIM9Q86XI8 627 aa13.34□□□□□ -0.27
SMAD3-213ENST00000560175 CAMK1DQ8IU85 385 aa13.34□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms