RNA–Protein interactions for RNA: ENST00000560055.5

RPL28-209, Transcript of ribosomal protein L28, humanhuman

TSL 3 BASIC

Gene RPL28, Length 670 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPL28-209ENST00000560055 PREBQ9HCU5 417 aa17.02■□□□□ 0.32
RPL28-209ENST00000560055 FADS3Q9Y5Q0 445 aa17.02■□□□□ 0.32
RPL28-209ENST00000560055 TTC24A2A3L6 582 aaPredicted RBP17.01■□□□□ 0.31
RPL28-209ENST00000560055 FAM47DPA6NHR8 397 aa17.01■□□□□ 0.31
RPL28-209ENST00000560055 MEI4A8MW99 385 aa17.01■□□□□ 0.31
RPL28-209ENST00000560055 APOC4-APOC2K7ER74 178 aa17.01■□□□□ 0.31
RPL28-209ENST00000560055 KCNK1O00180 336 aa17.01■□□□□ 0.31
RPL28-209ENST00000560055 TRAFD1O14545 582 aaPredicted RBP17.01■□□□□ 0.31
RPL28-209ENST00000560055 SPINT1O43278 529 aa17.01■□□□□ 0.31
RPL28-209ENST00000560055 LATO43561 262 aa17.01■□□□□ 0.31
RPL28-209ENST00000560055 APOC2P02655 101 aa17.01■□□□□ 0.31
RPL28-209ENST00000560055 ABL2P42684 1182 aa17.01■□□□□ 0.31
RPL28-209ENST00000560055 CCR5P51681 352 aa17.01■□□□□ 0.31
RPL28-209ENST00000560055 MAXP61244 160 aa17.01■□□□□ 0.31
RPL28-209ENST00000560055 PPP2CBP62714 309 aa17.01■□□□□ 0.31
RPL28-209ENST00000560055 PPP2CAP67775 309 aa17.01■□□□□ 0.31
RPL28-209ENST00000560055 SPEM2Q0P670 501 aa17.01■□□□□ 0.31
RPL28-209ENST00000560055 CCDC173Q0VFZ6 552 aa17.01■□□□□ 0.31
RPL28-209ENST00000560055 ZBTB17Q13105 803 aa17.01■□□□□ 0.31
RPL28-209ENST00000560055 KLF1Q13351 362 aaPredicted RBP17.01■□□□□ 0.31
RPL28-209ENST00000560055 ZNF211Q13398 564 aaPredicted RBP17.01■□□□□ 0.31
RPL28-209ENST00000560055 WDR45BQ5MNZ6 344 aa17.01■□□□□ 0.31
RPL28-209ENST00000560055 NEK5Q6P3R8 708 aa17.01■□□□□ 0.31
RPL28-209ENST00000560055 TRIM69Q86WT6 500 aa17.01■□□□□ 0.31
RPL28-209ENST00000560055 CAMK1DQ8IU85 385 aa17.01■□□□□ 0.31
RPL28-209ENST00000560055 PIGKQ92643 395 aa17.01■□□□□ 0.31
RPL28-209ENST00000560055 RAB7BQ96AH8 199 aa17.01■□□□□ 0.31
RPL28-209ENST00000560055 ATP13A3Q9H7F0 1226 aa17.01■□□□□ 0.31
RPL28-209ENST00000560055 NOD2Q9HC29 1040 aa17.01■□□□□ 0.31
RPL28-209ENST00000560055 NT5MQ9NPB1 228 aa17.01■□□□□ 0.31
RPL28-209ENST00000560055 RBM22Q9NW64 420 aaKnown RBP eCLIP17.01■□□□□ 0.31
RPL28-209ENST00000560055 TPX2Q9ULW0 747 aaKnown RBP17.01■□□□□ 0.31
RPL28-209ENST00000560055 ATP8A1Q9Y2Q0 1164 aa17.01■□□□□ 0.31
RPL28-209ENST00000560055 ATXN2Q99700 1313 aaKnown RBP17■□□□□ 0.31
RPL28-209ENST00000560055 AREL1O15033 823 aa17■□□□□ 0.31
RPL28-209ENST00000560055 HLA-DQB2P05538 268 aa17■□□□□ 0.31
RPL28-209ENST00000560055 ZNF806P0C7X5 589 aa17■□□□□ 0.31
RPL28-209ENST00000560055 TIMP2P16035 220 aa17■□□□□ 0.31
RPL28-209ENST00000560055 MAOBP27338 520 aa17■□□□□ 0.31
RPL28-209ENST00000560055 SERPINA4P29622 427 aa17■□□□□ 0.31
RPL28-209ENST00000560055 CETN2P41208 172 aa17■□□□□ 0.31
RPL28-209ENST00000560055 AP1B1Q10567 949 aa17■□□□□ 0.31
RPL28-209ENST00000560055 CACNA1EQ15878 2313 aa17■□□□□ 0.31
RPL28-209ENST00000560055 CCDC6Q16204 474 aa17■□□□□ 0.31
RPL28-209ENST00000560055 CSRP2Q16527 193 aa17■□□□□ 0.31
RPL28-209ENST00000560055 FBXL19Q6PCT2 694 aa17■□□□□ 0.31
RPL28-209ENST00000560055 BRAT1Q6PJG6 821 aa17■□□□□ 0.31
RPL28-209ENST00000560055 ZSWIM9Q86XI8 627 aa17■□□□□ 0.31
RPL28-209ENST00000560055 CNTD1Q8N815 330 aa17■□□□□ 0.31
RPL28-209ENST00000560055 HAUS1Q96CS2 278 aa17■□□□□ 0.31
RPL28-209ENST00000560055 POLR1EQ9GZS1 481 aaKnown RBP17■□□□□ 0.31
RPL28-209ENST00000560055 EBF2Q9HAK2 575 aa17■□□□□ 0.31
RPL28-209ENST00000560055 SCUBE2Q9NQ36 999 aa17■□□□□ 0.31
RPL28-209ENST00000560055 VPS45Q9NRW7 570 aa17■□□□□ 0.31
RPL28-209ENST00000560055 SEMA4GQ9NTN9 838 aa17■□□□□ 0.31
RPL28-209ENST00000560055 EIF2B4Q9UI10 523 aaKnown RBP17■□□□□ 0.31
RPL28-209ENST00000560055 SLCO1B1Q9Y6L6 691 aa17■□□□□ 0.31
RPL28-209ENST00000560055 PI4KAP42356 2102 aa16.99■□□□□ 0.31
RPL28-209ENST00000560055 TBC1D3DA0A087WVF3 549 aa16.99■□□□□ 0.31
RPL28-209ENST00000560055 TBC1D3IA0A087WXS9 549 aa16.99■□□□□ 0.31
RPL28-209ENST00000560055 TBC1D3EA0A087X179 549 aa16.99■□□□□ 0.31
RPL28-209ENST00000560055 TBC1D3KA0A087X1G2 549 aa16.99■□□□□ 0.31
RPL28-209ENST00000560055 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP16.99■□□□□ 0.31
RPL28-209ENST00000560055 TBC1D3FA6NER0 549 aaPredicted RBP16.99■□□□□ 0.31
RPL28-209ENST00000560055 TBC1D3LB9A6J9 549 aa16.99■□□□□ 0.31
RPL28-209ENST00000560055 ZSCAN12O43309 604 aa16.99■□□□□ 0.31
RPL28-209ENST00000560055 HTRA2O43464 458 aaPredicted RBP16.99■□□□□ 0.31
RPL28-209ENST00000560055 SOCS5O75159 536 aa16.99■□□□□ 0.31
RPL28-209ENST00000560055 TJP3O95049 919 aa16.99■□□□□ 0.31
RPL28-209ENST00000560055 FSBPO95073 299 aa16.99■□□□□ 0.31
RPL28-209ENST00000560055 JCHAINP01591 159 aa16.99■□□□□ 0.31
RPL28-209ENST00000560055 TBC1D3HP0C7X1 549 aa16.99■□□□□ 0.31
RPL28-209ENST00000560055 CD27P26842 260 aa16.99■□□□□ 0.31
RPL28-209ENST00000560055 BCL2L1Q07817 233 aa16.99■□□□□ 0.31
RPL28-209ENST00000560055 XRCC4Q13426 336 aa16.99■□□□□ 0.31
RPL28-209ENST00000560055 IHHQ14623 411 aa16.99■□□□□ 0.31
RPL28-209ENST00000560055 NOMO1Q15155 1222 aa16.99■□□□□ 0.31
RPL28-209ENST00000560055 RPS6KA1Q15418 735 aa16.99■□□□□ 0.31
RPL28-209ENST00000560055 TBC1D3GQ6DHY5 549 aa16.99■□□□□ 0.31
RPL28-209ENST00000560055 TBC1D3CQ6IPX1 549 aa16.99■□□□□ 0.31
RPL28-209ENST00000560055 B4GALNT4Q76KP1 1039 aa16.99■□□□□ 0.31
RPL28-209ENST00000560055 RGL4Q8IZJ4 473 aa16.99■□□□□ 0.31
RPL28-209ENST00000560055 TBC1D3Q8IZP1 549 aaPredicted RBP16.99■□□□□ 0.31
RPL28-209ENST00000560055 ARRDC2Q8TBH0 407 aa16.99■□□□□ 0.31
RPL28-209ENST00000560055 ACTL9Q8TC94 416 aa16.99■□□□□ 0.31
RPL28-209ENST00000560055 TFB1MQ8WVM0 346 aaKnown RBP16.99■□□□□ 0.31
RPL28-209ENST00000560055 QKIQ96PU8 341 aaKnown RBP eCLIP16.99■□□□□ 0.31
RPL28-209ENST00000560055 SEMA3CQ99985 751 aa16.99■□□□□ 0.31
RPL28-209ENST00000560055 TLR10Q9BXR5 811 aa16.99■□□□□ 0.31
RPL28-209ENST00000560055 SMOC1Q9H4F8 434 aa16.99■□□□□ 0.31
RPL28-209ENST00000560055 RALGAPA1Q6GYQ0 2036 aa16.98■□□□□ 0.31
RPL28-209ENST00000560055 A0A1W2PPC4 97 aa16.98■□□□□ 0.31
RPL28-209ENST00000560055 UPK3BL1B0FP48 263 aa16.98■□□□□ 0.31
RPL28-209ENST00000560055 HACD1B0YJ81 288 aa16.98■□□□□ 0.31
RPL28-209ENST00000560055 PATE3B3GLJ2 98 aa16.98■□□□□ 0.31
RPL28-209ENST00000560055 UPK3BL2E5RIL1 263 aa16.98■□□□□ 0.31
RPL28-209ENST00000560055 CES1P23141 567 aa16.98■□□□□ 0.31
RPL28-209ENST00000560055 SUOXP51687 545 aa16.98■□□□□ 0.31
RPL28-209ENST00000560055 OTUD4Q01804 1114 aaKnown RBP16.98■□□□□ 0.31
RPL28-209ENST00000560055 NIPAL4Q0D2K0 466 aa16.98■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 18.6 ms