RNA–Protein interactions for RNA: ENST00000559399.5

LRRC28-213, Transcript of leucine rich repeat containing 28, humanhuman

TSL 3

Gene LRRC28, Length 892 nt, Biotype processed transcript, Subcellular localisation Cytosol, Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC28-213ENST00000559399 MCOLN2Q8IZK6 566 aa15.12■□□□□ 0.01
LRRC28-213ENST00000559399 UMODL1-AS1Q8N2C9 162 aa15.12■□□□□ 0.01
LRRC28-213ENST00000559399 NETO2Q8NC67 525 aa15.12■□□□□ 0.01
LRRC28-213ENST00000559399 IFI44Q8TCB0 444 aa15.12■□□□□ 0.01
LRRC28-213ENST00000559399 MAPK15Q8TD08 544 aa15.12■□□□□ 0.01
LRRC28-213ENST00000559399 LMX1AQ8TE12 382 aa15.12■□□□□ 0.01
LRRC28-213ENST00000559399 FGF11Q92914 225 aa15.12■□□□□ 0.01
LRRC28-213ENST00000559399 CENPTQ96BT3 561 aa15.12■□□□□ 0.01
LRRC28-213ENST00000559399 NCAPGQ9BPX3 1015 aa15.12■□□□□ 0.01
LRRC28-213ENST00000559399 DONSONQ9NYP3 566 aa15.12■□□□□ 0.01
LRRC28-213ENST00000559399 UBA2Q9UBT2 640 aaPredicted RBP15.12■□□□□ 0.01
LRRC28-213ENST00000559399 APOBEC3BQ9UH17 382 aaKnown RBP15.12■□□□□ 0.01
LRRC28-213ENST00000559399 KLF15Q9UIH9 416 aa15.12■□□□□ 0.01
LRRC28-213ENST00000559399 PCDHB1Q9Y5F3 818 aa15.12■□□□□ 0.01
LRRC28-213ENST00000559399 LOC400499M0QZD8 3231 aa15.12■□□□□ 0.01
LRRC28-213ENST00000559399 NBEAQ8NFP9 2946 aa15.12■□□□□ 0.01
LRRC28-213ENST00000559399 TOR1BO14657 336 aa15.11■□□□□ 0.01
LRRC28-213ENST00000559399 TPP1O14773 563 aa15.11■□□□□ 0.01
LRRC28-213ENST00000559399 MMP20O60882 483 aa15.11■□□□□ 0.01
LRRC28-213ENST00000559399 XPAP23025 273 aaPredicted RBP15.11■□□□□ 0.01
LRRC28-213ENST00000559399 SUOXP51687 545 aa15.11■□□□□ 0.01
LRRC28-213ENST00000559399 YPEL5P62699 121 aa15.11■□□□□ 0.01
LRRC28-213ENST00000559399 CDKN3Q16667 212 aa15.11■□□□□ 0.01
LRRC28-213ENST00000559399 DEFB133Q30KQ1 61 aa15.11■□□□□ 0.01
LRRC28-213ENST00000559399 EXOC2Q96KP1 924 aa15.11■□□□□ 0.01
LRRC28-213ENST00000559399 IL12RB2Q99665 862 aa15.11■□□□□ 0.01
LRRC28-213ENST00000559399 WRAP53Q9BUR4 548 aaKnown RBP15.11■□□□□ 0.01
LRRC28-213ENST00000559399 HSD3B7Q9H2F3 369 aa15.11■□□□□ 0.01
LRRC28-213ENST00000559399 SPASTQ9UBP0 616 aa15.11■□□□□ 0.01
LRRC28-213ENST00000559399 LHX3Q9UBR4 397 aa15.11■□□□□ 0.01
LRRC28-213ENST00000559399 SALL4Q9UJQ4 1053 aa15.11■□□□□ 0.01
LRRC28-213ENST00000559399 ATRXP46100 2492 aa15.1■□□□□ 0.01
LRRC28-213ENST00000559399 INSIG1O15503 277 aa15.1■□□□□ 0.01
LRRC28-213ENST00000559399 CSO75390 466 aaKnown RBP15.1■□□□□ 0.01
LRRC28-213ENST00000559399 PIGNO95427 931 aa15.1■□□□□ 0.01
LRRC28-213ENST00000559399 MBD3O95983 291 aa15.1■□□□□ 0.01
LRRC28-213ENST00000559399 ATP1A3P13637 1013 aa15.1■□□□□ 0.01
LRRC28-213ENST00000559399 TIMP2P16035 220 aa15.1■□□□□ 0.01
LRRC28-213ENST00000559399 NDST2P52849 883 aa15.1■□□□□ 0.01
LRRC28-213ENST00000559399 OGDHQ02218 1023 aa15.1■□□□□ 0.01
LRRC28-213ENST00000559399 ELP6Q0PNE2 266 aa15.1■□□□□ 0.01
LRRC28-213ENST00000559399 GRM3Q14832 879 aa15.1■□□□□ 0.01
LRRC28-213ENST00000559399 CYTH1Q15438 398 aa15.1■□□□□ 0.01
LRRC28-213ENST00000559399 NR0B2Q15466 257 aa15.1■□□□□ 0.01
LRRC28-213ENST00000559399 KLHL40Q2TBA0 621 aa15.1■□□□□ 0.01
LRRC28-213ENST00000559399 CCDC183Q5T5S1 534 aa15.1■□□□□ 0.01
LRRC28-213ENST00000559399 GUSBP11Q6P575 273 aa15.1■□□□□ 0.01
LRRC28-213ENST00000559399 MACC1Q6ZN28 852 aa15.1■□□□□ 0.01
LRRC28-213ENST00000559399 DNAAF5Q86Y56 855 aa15.1■□□□□ 0.01
LRRC28-213ENST00000559399 PHACTR4Q8IZ21 702 aa15.1■□□□□ 0.01
LRRC28-213ENST00000559399 RBFAQ8N0V3 343 aa15.1■□□□□ 0.01
LRRC28-213ENST00000559399 AOPEPQ8N6M6 819 aa15.1■□□□□ 0.01
LRRC28-213ENST00000559399 TP53I13Q8NBR0 393 aaPredicted RBP15.1■□□□□ 0.01
LRRC28-213ENST00000559399 HCAR2Q8TDS4 363 aa15.1■□□□□ 0.01
LRRC28-213ENST00000559399 VCPIP1Q96JH7 1222 aa15.1■□□□□ 0.01
LRRC28-213ENST00000559399 TBATAQ96M53 351 aa15.1■□□□□ 0.01
LRRC28-213ENST00000559399 BBC3Q96PG8 261 aaPredicted RBP15.1■□□□□ 0.01
LRRC28-213ENST00000559399 SYT11Q9BT88 431 aa15.1■□□□□ 0.01
LRRC28-213ENST00000559399 CPEB1Q9BZB8 566 aaKnown RBP15.1■□□□□ 0.01
LRRC28-213ENST00000559399 SLC13A1Q9BZW2 595 aa15.1■□□□□ 0.01
LRRC28-213ENST00000559399 LRRC19Q9H756 370 aa15.1■□□□□ 0.01
LRRC28-213ENST00000559399 PDFQ9HBH1 243 aa15.1■□□□□ 0.01
LRRC28-213ENST00000559399 PARVAQ9NVD7 372 aa15.1■□□□□ 0.01
LRRC28-213ENST00000559399 TAS2R14Q9NYV8 317 aa15.1■□□□□ 0.01
LRRC28-213ENST00000559399 MYO6Q9UM54 1294 aa15.1■□□□□ 0.01
LRRC28-213ENST00000559399 ACACAQ13085 2346 aa15.1■□□□□ 0.01
LRRC28-213ENST00000559399 TSPAN11A1L157 253 aa15.09■□□□□ 0.01
LRRC28-213ENST00000559399 CPED1A4D0V7 1026 aa15.09■□□□□ 0.01
LRRC28-213ENST00000559399 EIF4E1BA6NMX2 242 aaKnown RBP15.09■□□□□ 0.01
LRRC28-213ENST00000559399 EIF3CLB5ME19 914 aaKnown RBP15.09■□□□□ 0.01
LRRC28-213ENST00000559399 USP12O75317 370 aa15.09■□□□□ 0.01
LRRC28-213ENST00000559399 MPOP05164 745 aa15.09■□□□□ 0.01
LRRC28-213ENST00000559399 ITIH2P19823 946 aa15.09■□□□□ 0.01
LRRC28-213ENST00000559399 TNFAIP3P21580 790 aa15.09■□□□□ 0.01
LRRC28-213ENST00000559399 PSMA2P25787 234 aa15.09■□□□□ 0.01
LRRC28-213ENST00000559399 RPIAP49247 311 aa15.09■□□□□ 0.01
LRRC28-213ENST00000559399 GABREP78334 506 aa15.09■□□□□ 0.01
LRRC28-213ENST00000559399 MAMLD1Q13495 774 aa15.09■□□□□ 0.01
LRRC28-213ENST00000559399 IRF4Q15306 451 aa15.09■□□□□ 0.01
LRRC28-213ENST00000559399 TMEM52BQ4KMG9 183 aa15.09■□□□□ 0.01
LRRC28-213ENST00000559399 PRRT3Q5FWE3 981 aa15.09■□□□□ 0.01
LRRC28-213ENST00000559399 CFAP58Q5T655 872 aa15.09■□□□□ 0.01
LRRC28-213ENST00000559399 EFL1Q7Z2Z2 1120 aaKnown RBP15.09■□□□□ 0.01
LRRC28-213ENST00000559399 IRF2BP2Q7Z5L9 587 aa15.09■□□□□ 0.01
LRRC28-213ENST00000559399 LSMEM2Q8N112 164 aa15.09■□□□□ 0.01
LRRC28-213ENST00000559399 UBL7Q96S82 380 aaPredicted RBP15.09■□□□□ 0.01
LRRC28-213ENST00000559399 EIF3CQ99613 913 aaKnown RBP15.09■□□□□ 0.01
LRRC28-213ENST00000559399 LRRC61Q9BV99 259 aa15.09■□□□□ 0.01
LRRC28-213ENST00000559399 NAT10Q9H0A0 1025 aaKnown RBP15.09■□□□□ 0.01
LRRC28-213ENST00000559399 TCEAL2Q9H3H9 227 aaPredicted RBP15.09■□□□□ 0.01
LRRC28-213ENST00000559399 MBNL1Q9NR56 388 aaKnown RBP15.09■□□□□ 0.01
LRRC28-213ENST00000559399 GPATCH2LQ9NWQ4 482 aa15.09■□□□□ 0.01
LRRC28-213ENST00000559399 AP4E1Q9UPM8 1137 aa15.09■□□□□ 0.01
LRRC28-213ENST00000559399 ADAMTS20P59510 1910 aa15.08■□□□□ 0
LRRC28-213ENST00000559399 EME2A4GXA9 379 aaPredicted RBP15.08■□□□□ 0
LRRC28-213ENST00000559399 ARHGAP42A6NI28 874 aa15.08■□□□□ 0
LRRC28-213ENST00000559399 TMCO5BA8MYB1 307 aa15.08■□□□□ 0
LRRC28-213ENST00000559399 LMO7DNF2Z398 122 aa15.08■□□□□ 0
LRRC28-213ENST00000559399 J3KR12 359 aa15.08■□□□□ 0
LRRC28-213ENST00000559399 EEF2KO00418 725 aaKnown RBP15.08■□□□□ 0
Retrieved 100 of 20,778 RNA–protein pairs in 47.7 ms