RNA–Protein interactions for RNA: ENST00000559152.5

CLPX-204, Transcript of caseinolytic mitochondrial matrix peptidase chaperone subunit, humanhuman

TSL 1 (best)

Gene CLPX, Length 2,228 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLPX-204ENST00000559152 ARRDC2Q8TBH0 407 aa11.39□□□□□ -0.59
CLPX-204ENST00000559152 PLD4Q96BZ4 506 aa11.39□□□□□ -0.59
CLPX-204ENST00000559152 CMTM5Q96DZ9 223 aa11.39□□□□□ -0.59
CLPX-204ENST00000559152 ZNF512Q96ME7 567 aaPredicted RBP11.39□□□□□ -0.59
CLPX-204ENST00000559152 NUDCD1Q96RS6 583 aa11.39□□□□□ -0.59
CLPX-204ENST00000559152 MRPL46Q9H2W6 279 aaKnown RBP11.39□□□□□ -0.59
CLPX-204ENST00000559152 CPSF2Q9P2I0 782 aaKnown RBP11.39□□□□□ -0.59
CLPX-204ENST00000559152 UXTQ9UBK9 157 aaPredicted RBP11.39□□□□□ -0.59
CLPX-204ENST00000559152 AFF4Q9UHB7 1163 aaKnown RBP11.39□□□□□ -0.59
CLPX-204ENST00000559152 EPB41L3Q9Y2J2 1087 aaPredicted RBP11.39□□□□□ -0.59
CLPX-204ENST00000559152 FNDC1Q4ZHG4 1894 aaPredicted RBP11.38□□□□□ -0.59
CLPX-204ENST00000559152 ZNF195O14628 629 aa11.38□□□□□ -0.59
CLPX-204ENST00000559152 PQBP1O60828 265 aaKnown RBP11.38□□□□□ -0.59
CLPX-204ENST00000559152 ANP32DO95626 131 aa11.38□□□□□ -0.59
CLPX-204ENST00000559152 CES1P23141 567 aa11.38□□□□□ -0.59
CLPX-204ENST00000559152 SLC26A3P40879 764 aa11.38□□□□□ -0.59
CLPX-204ENST00000559152 PPP3CCP48454 512 aa11.38□□□□□ -0.59
CLPX-204ENST00000559152 RAP1GDS1P52306 607 aa11.38□□□□□ -0.59
CLPX-204ENST00000559152 PRAMEP78395 509 aa11.38□□□□□ -0.59
CLPX-204ENST00000559152 RFTN1Q14699 578 aaPredicted RBP11.38□□□□□ -0.59
CLPX-204ENST00000559152 SIRPB2Q5JXA9 342 aa11.38□□□□□ -0.59
CLPX-204ENST00000559152 AGAP9Q5VTM2 703 aa11.38□□□□□ -0.59
CLPX-204ENST00000559152 TPGS2Q68CL5 300 aa11.38□□□□□ -0.59
CLPX-204ENST00000559152 NADSYN1Q6IA69 706 aa11.38□□□□□ -0.59
CLPX-204ENST00000559152 KLC3Q6P597 504 aa11.38□□□□□ -0.59
CLPX-204ENST00000559152 EPGNQ6UW88 154 aa11.38□□□□□ -0.59
CLPX-204ENST00000559152 PRSS55Q6UWB4 352 aaPredicted RBP11.38□□□□□ -0.59
CLPX-204ENST00000559152 TREML1Q86YW5 311 aa11.38□□□□□ -0.59
CLPX-204ENST00000559152 GPATCH11Q8N954 259 aa11.38□□□□□ -0.59
CLPX-204ENST00000559152 TDRD5Q8NAT2 981 aaKnown RBP11.38□□□□□ -0.59
CLPX-204ENST00000559152 ZNF296Q8WUU4 475 aaPredicted RBP11.38□□□□□ -0.59
CLPX-204ENST00000559152 KCTD4Q8WVF5 259 aa11.38□□□□□ -0.59
CLPX-204ENST00000559152 DDX50Q9BQ39 737 aaKnown RBP11.38□□□□□ -0.59
CLPX-204ENST00000559152 GATA5Q9BWX5 397 aaPredicted RBP11.38□□□□□ -0.59
CLPX-204ENST00000559152 MFSD1Q9H3U5 465 aa11.38□□□□□ -0.59
CLPX-204ENST00000559152 HIPK3Q9H422 1215 aa11.38□□□□□ -0.59
CLPX-204ENST00000559152 DENND2DQ9H6A0 471 aaPredicted RBP11.38□□□□□ -0.59
CLPX-204ENST00000559152 RIMKLBQ9ULI2 386 aa11.38□□□□□ -0.59
CLPX-204ENST00000559152 CARNS1A5YM72 827 aa11.37□□□□□ -0.59
CLPX-204ENST00000559152 PRR5-ARHGAP8B1AHC4 643 aa11.37□□□□□ -0.59
CLPX-204ENST00000559152 PALM2-AKAP2B1ALY0 433 aaPredicted RBP11.37□□□□□ -0.59
CLPX-204ENST00000559152 DIAPH2O60879 1101 aa11.37□□□□□ -0.59
CLPX-204ENST00000559152 CLDN11O75508 207 aa11.37□□□□□ -0.59
CLPX-204ENST00000559152 EFEMP2O95967 443 aa11.37□□□□□ -0.59
CLPX-204ENST00000559152 SERPINF2P08697 491 aa11.37□□□□□ -0.59
CLPX-204ENST00000559152 PRDX6P30041 224 aa11.37□□□□□ -0.59
CLPX-204ENST00000559152 GRIA4P48058 902 aa11.37□□□□□ -0.59
CLPX-204ENST00000559152 RPL14P50914 215 aaKnown RBP11.37□□□□□ -0.59
CLPX-204ENST00000559152 CCNG1P51959 295 aa11.37□□□□□ -0.59
CLPX-204ENST00000559152 C1QTNF8P60827 252 aa11.37□□□□□ -0.59
CLPX-204ENST00000559152 MXRA7P84157 204 aa11.37□□□□□ -0.59
CLPX-204ENST00000559152 ARHGAP8P85298 464 aa11.37□□□□□ -0.59
CLPX-204ENST00000559152 GNA12Q03113 381 aa11.37□□□□□ -0.59
CLPX-204ENST00000559152 KDSRQ06136 332 aa11.37□□□□□ -0.59
CLPX-204ENST00000559152 MSLNQ13421 630 aaPredicted RBP11.37□□□□□ -0.59
CLPX-204ENST00000559152 ZRSR2Q15696 482 aaKnown RBP11.37□□□□□ -0.59
CLPX-204ENST00000559152 ALG1LQ6GMV1 187 aa11.37□□□□□ -0.59
CLPX-204ENST00000559152 TAS1R1Q7RTX1 841 aa11.37□□□□□ -0.59
CLPX-204ENST00000559152 KIRREL3Q8IZU9 778 aa11.37□□□□□ -0.59
CLPX-204ENST00000559152 CENPLQ8N0S6 344 aaPredicted RBP11.37□□□□□ -0.59
CLPX-204ENST00000559152 TMEM151AQ8N4L1 468 aa11.37□□□□□ -0.59
CLPX-204ENST00000559152 ZNF781Q8N8C0 355 aa11.37□□□□□ -0.59
CLPX-204ENST00000559152 SEMA3CQ99985 751 aa11.37□□□□□ -0.59
CLPX-204ENST00000559152 COG4Q9H9E3 785 aa11.37□□□□□ -0.59
CLPX-204ENST00000559152 TRPM5Q9NZQ8 1165 aa11.37□□□□□ -0.59
CLPX-204ENST00000559152 SEPT3Q9UH03 358 aa11.37□□□□□ -0.59
CLPX-204ENST00000559152 CORO1CQ9ULV4 474 aaPredicted RBP11.37□□□□□ -0.59
CLPX-204ENST00000559152 L3MBTL1Q9Y468 752 aa11.37□□□□□ -0.59
CLPX-204ENST00000559152 MRPL42Q9Y6G3 142 aaKnown RBP11.37□□□□□ -0.59
CLPX-204ENST00000559152 VWA8A3KMH1 1905 aa11.37□□□□□ -0.59
CLPX-204ENST00000559152 NYNRINQ9P2P1 1898 aaKnown RBP11.37□□□□□ -0.59
CLPX-204ENST00000559152 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP11.37□□□□□ -0.59
CLPX-204ENST00000559152 ZNF840PA6NDX5 716 aa11.37□□□□□ -0.59
CLPX-204ENST00000559152 TARM1B6A8C7 271 aa11.37□□□□□ -0.59
CLPX-204ENST00000559152 TK2O00142 265 aa11.37□□□□□ -0.59
CLPX-204ENST00000559152 HDAC3O15379 428 aa11.37□□□□□ -0.59
CLPX-204ENST00000559152 NPHS1O60500 1241 aa11.37□□□□□ -0.59
CLPX-204ENST00000559152 PEX11AO75192 247 aa11.37□□□□□ -0.59
CLPX-204ENST00000559152 CIB2O75838 187 aa11.37□□□□□ -0.59
CLPX-204ENST00000559152 RBP1P09455 135 aa11.37□□□□□ -0.59
CLPX-204ENST00000559152 OR1D2P34982 312 aa11.37□□□□□ -0.59
CLPX-204ENST00000559152 AVPR1AP37288 418 aa11.37□□□□□ -0.59
CLPX-204ENST00000559152 ETFBP38117 255 aa11.37□□□□□ -0.59
CLPX-204ENST00000559152 TAS2R39P59534 338 aa11.37□□□□□ -0.59
CLPX-204ENST00000559152 DNAJB13P59910 316 aa11.37□□□□□ -0.59
CLPX-204ENST00000559152 NAPRTQ6XQN6 538 aa11.37□□□□□ -0.59
CLPX-204ENST00000559152 CHST9Q7L1S5 443 aa11.37□□□□□ -0.59
CLPX-204ENST00000559152 ANKRD33Q7Z3H0 272 aa11.37□□□□□ -0.59
CLPX-204ENST00000559152 TMEM173Q86WV6 379 aaPredicted RBP11.37□□□□□ -0.59
CLPX-204ENST00000559152 CILP2Q8IUL8 1156 aa11.37□□□□□ -0.59
CLPX-204ENST00000559152 CEP97Q8IW35 865 aa11.37□□□□□ -0.59
CLPX-204ENST00000559152 PGBD5Q8N414 524 aa11.37□□□□□ -0.59
CLPX-204ENST00000559152 OR13J1Q8NGT2 312 aa11.37□□□□□ -0.59
CLPX-204ENST00000559152 MYRFLQ96LU7 910 aa11.37□□□□□ -0.59
CLPX-204ENST00000559152 OMDQ99983 421 aa11.37□□□□□ -0.59
CLPX-204ENST00000559152 PDFQ9HBH1 243 aa11.37□□□□□ -0.59
CLPX-204ENST00000559152 SAGE1Q9NXZ1 904 aa11.37□□□□□ -0.59
CLPX-204ENST00000559152 NCKIPSDQ9NZQ3 722 aa11.37□□□□□ -0.59
CLPX-204ENST00000559152 XPR1Q9UBH6 696 aa11.37□□□□□ -0.59
CLPX-204ENST00000559152 ARIH1Q9Y4X5 557 aaPredicted RBP11.37□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms