RNA–Protein interactions for RNA: ENST00000558072.5

TPM1-209, Transcript of tropomyosin 1, humanhuman

TSL 2

Gene TPM1, Length 525 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-209ENST00000558072 TTC25Q96NG3 672 aa12.54□□□□□ -0.4
TPM1-209ENST00000558072 RBM15Q96T37 977 aaKnown RBP eCLIP12.54□□□□□ -0.4
TPM1-209ENST00000558072 IER2Q9BTL4 223 aa12.54□□□□□ -0.4
TPM1-209ENST00000558072 OSBPL6Q9BZF3 934 aa12.54□□□□□ -0.4
TPM1-209ENST00000558072 IL22Q9GZX6 179 aa12.54□□□□□ -0.4
TPM1-209ENST00000558072 TMEM245Q9H330 911 aa12.54□□□□□ -0.4
TPM1-209ENST00000558072 ARNT2Q9HBZ2 717 aa12.54□□□□□ -0.4
TPM1-209ENST00000558072 NOD2Q9HC29 1040 aa12.54□□□□□ -0.4
TPM1-209ENST00000558072 ARHGEF3Q9NR81 526 aa12.54□□□□□ -0.4
TPM1-209ENST00000558072 POLR3BQ9NW08 1133 aaPredicted RBP12.54□□□□□ -0.4
TPM1-209ENST00000558072 GRHL1Q9NZI5 618 aa12.54□□□□□ -0.4
TPM1-209ENST00000558072 HACD3Q9P035 362 aa12.54□□□□□ -0.4
TPM1-209ENST00000558072 NOL12Q9UGY1 213 aaKnown RBP eCLIP12.54□□□□□ -0.4
TPM1-209ENST00000558072 SLCO3A1Q9UIG8 710 aa12.54□□□□□ -0.4
TPM1-209ENST00000558072 NDRG2Q9UN36 371 aaKnown RBP12.54□□□□□ -0.4
TPM1-209ENST00000558072 V9GYY5 206 aaPredicted RBP12.54□□□□□ -0.4
TPM1-209ENST00000558072 UQCRHLA0A096LP55 91 aa12.53□□□□□ -0.4
TPM1-209ENST00000558072 LOC285095A0A1B0GVY8 99 aa12.53□□□□□ -0.4
TPM1-209ENST00000558072 ESYT3A0FGR9 886 aa12.53□□□□□ -0.4
TPM1-209ENST00000558072 SDR42E2A6NKP2 422 aa12.53□□□□□ -0.4
TPM1-209ENST00000558072 SMAD6O43541 496 aaKnown RBP12.53□□□□□ -0.4
TPM1-209ENST00000558072 PMPCBO75439 489 aa12.53□□□□□ -0.4
TPM1-209ENST00000558072 SPAG6O75602 509 aa12.53□□□□□ -0.4
TPM1-209ENST00000558072 EGFP01133 1207 aa12.53□□□□□ -0.4
TPM1-209ENST00000558072 UQCRHP07919 91 aa12.53□□□□□ -0.4
TPM1-209ENST00000558072 TSHRP16473 764 aa12.53□□□□□ -0.4
TPM1-209ENST00000558072 MAGEA9P43362 315 aa12.53□□□□□ -0.4
TPM1-209ENST00000558072 CARSP49589 748 aaKnown RBP12.53□□□□□ -0.4
TPM1-209ENST00000558072 STK19P49842 368 aaPredicted RBP12.53□□□□□ -0.4
TPM1-209ENST00000558072 CCNHP51946 323 aaPredicted RBP12.53□□□□□ -0.4
TPM1-209ENST00000558072 EPHB1P54762 984 aa12.53□□□□□ -0.4
TPM1-209ENST00000558072 STARD6P59095 220 aa12.53□□□□□ -0.4
TPM1-209ENST00000558072 MAXP61244 160 aa12.53□□□□□ -0.4
TPM1-209ENST00000558072 MRPS25P82663 173 aaKnown RBP12.53□□□□□ -0.4
TPM1-209ENST00000558072 DSC2Q02487 901 aa12.53□□□□□ -0.4
TPM1-209ENST00000558072 SPDYCQ5MJ68 293 aa12.53□□□□□ -0.4
TPM1-209ENST00000558072 EMC10Q5UCC4 262 aa12.53□□□□□ -0.4
TPM1-209ENST00000558072 FSTL4Q6MZW2 842 aa12.53□□□□□ -0.4
TPM1-209ENST00000558072 RANBP10Q6VN20 620 aa12.53□□□□□ -0.4
TPM1-209ENST00000558072 NLRP9Q7RTR0 991 aa12.53□□□□□ -0.4
TPM1-209ENST00000558072 PRPF39Q86UA1 669 aaKnown RBP12.53□□□□□ -0.4
TPM1-209ENST00000558072 RELL1Q8IUW5 271 aa12.53□□□□□ -0.4
TPM1-209ENST00000558072 IPMKQ8NFU5 416 aa12.53□□□□□ -0.4
TPM1-209ENST00000558072 TM6SF2Q9BZW4 377 aa12.53□□□□□ -0.4
TPM1-209ENST00000558072 FOXQ1Q9C009 403 aa12.53□□□□□ -0.4
TPM1-209ENST00000558072 TRABDQ9H4I3 376 aa12.53□□□□□ -0.4
TPM1-209ENST00000558072 DYRK4Q9NR20 520 aa12.53□□□□□ -0.4
TPM1-209ENST00000558072 ZDHHC18Q9NUE0 388 aa12.53□□□□□ -0.4
TPM1-209ENST00000558072 SAMD15Q9P1V8 674 aa12.53□□□□□ -0.4
TPM1-209ENST00000558072 DKK3Q9UBP4 350 aa12.53□□□□□ -0.4
TPM1-209ENST00000558072 IL36AQ9UHA7 158 aa12.53□□□□□ -0.4
TPM1-209ENST00000558072 HCN2Q9UL51 889 aa12.53□□□□□ -0.4
TPM1-209ENST00000558072 NFU1Q9UMS0 254 aa12.53□□□□□ -0.4
TPM1-209ENST00000558072 SCML1Q9UN30 329 aa12.53□□□□□ -0.4
TPM1-209ENST00000558072 MTF2Q9Y483 593 aaPredicted RBP12.53□□□□□ -0.4
TPM1-209ENST00000558072 RAI2Q9Y5P3 530 aa12.53□□□□□ -0.4
TPM1-209ENST00000558072 STON1Q9Y6Q2 735 aa12.53□□□□□ -0.4
TPM1-209ENST00000558072 MYO18AQ92614 2054 aaKnown RBP12.53□□□□□ -0.4
TPM1-209ENST00000558072 K7EQS6 105 aa12.52□□□□□ -0.41
TPM1-209ENST00000558072 K7ERQ8 282 aa12.52□□□□□ -0.41
TPM1-209ENST00000558072 HTRA2O43464 458 aaPredicted RBP12.52□□□□□ -0.41
TPM1-209ENST00000558072 TTC4O95801 387 aa12.52□□□□□ -0.41
TPM1-209ENST00000558072 MT-CYBP00156 380 aaPredicted RBP12.52□□□□□ -0.41
TPM1-209ENST00000558072 EPHX1P07099 455 aa12.52□□□□□ -0.41
TPM1-209ENST00000558072 GSTA2P09210 222 aa12.52□□□□□ -0.41
TPM1-209ENST00000558072 KIR2DL1P43626 348 aaPredicted RBP12.52□□□□□ -0.41
TPM1-209ENST00000558072 GRIA4P48058 902 aa12.52□□□□□ -0.41
TPM1-209ENST00000558072 NRLP54845 237 aa12.52□□□□□ -0.41
TPM1-209ENST00000558072 VSNL1P62760 191 aa12.52□□□□□ -0.41
TPM1-209ENST00000558072 NIPAL4Q0D2K0 466 aa12.52□□□□□ -0.41
TPM1-209ENST00000558072 FAXCQ5TGI0 409 aa12.52□□□□□ -0.41
TPM1-209ENST00000558072 KDELC1Q6UW63 502 aa12.52□□□□□ -0.41
TPM1-209ENST00000558072 GDPD4Q6W3E5 623 aa12.52□□□□□ -0.41
TPM1-209ENST00000558072 DPY19L3Q6ZPD9 716 aa12.52□□□□□ -0.41
TPM1-209ENST00000558072 Q6ZVU0 165 aa12.52□□□□□ -0.41
TPM1-209ENST00000558072 TRMT10CQ7L0Y3 403 aaKnown RBP12.52□□□□□ -0.41
TPM1-209ENST00000558072 PRUNE1Q86TP1 453 aa12.52□□□□□ -0.41
TPM1-209ENST00000558072 SIX5Q8N196 739 aa12.52□□□□□ -0.41
TPM1-209ENST00000558072 ZNF366Q8N895 744 aa12.52□□□□□ -0.41
TPM1-209ENST00000558072 OR2A12Q8NGT7 310 aa12.52□□□□□ -0.41
TPM1-209ENST00000558072 SPATA22Q8NHS9 363 aa12.52□□□□□ -0.41
TPM1-209ENST00000558072 PEX13Q92968 403 aa12.52□□□□□ -0.41
TPM1-209ENST00000558072 OXNAD1Q96HP4 312 aaPredicted RBP12.52□□□□□ -0.41
TPM1-209ENST00000558072 SERPINB12Q96P63 405 aa12.52□□□□□ -0.41
TPM1-209ENST00000558072 C19orf43Q9BQ61 176 aa12.52□□□□□ -0.41
TPM1-209ENST00000558072 TDRD1Q9BXT4 1180 aaKnown RBP12.52□□□□□ -0.41
TPM1-209ENST00000558072 MTG2Q9H4K7 406 aa12.52□□□□□ -0.41
TPM1-209ENST00000558072 SUV39H2Q9H5I1 410 aa12.52□□□□□ -0.41
TPM1-209ENST00000558072 ARFGAP3Q9NP61 516 aa12.52□□□□□ -0.41
TPM1-209ENST00000558072 CASS4Q9NQ75 786 aa12.52□□□□□ -0.41
TPM1-209ENST00000558072 EVLQ9UI08 416 aaPredicted RBP12.52□□□□□ -0.41
TPM1-209ENST00000558072 PHTF1Q9UMS5 762 aa12.52□□□□□ -0.41
TPM1-209ENST00000558072 KANSL1LA0AUZ9 987 aa12.51□□□□□ -0.41
TPM1-209ENST00000558072 TTC34A8MYJ7 566 aa12.51□□□□□ -0.41
TPM1-209ENST00000558072 E7ESA3 106 aa12.51□□□□□ -0.41
TPM1-209ENST00000558072 DYNC1I1O14576 645 aa12.51□□□□□ -0.41
TPM1-209ENST00000558072 MUSKO15146 869 aa12.51□□□□□ -0.41
TPM1-209ENST00000558072 ZNF821O75541 412 aaPredicted RBP12.51□□□□□ -0.41
TPM1-209ENST00000558072 CRTAMO95727 393 aa12.51□□□□□ -0.41
TPM1-209ENST00000558072 ADH1BP00325 375 aa12.51□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 67.9 ms