RNA–Protein interactions for RNA: ENST00000557703.5

SHMT2-234, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 4

Gene SHMT2, Length 542 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-234ENST00000557703 UGT2B4P06133 528 aa13.83□□□□□ -0.2
SHMT2-234ENST00000557703 RBP3P10745 1247 aa13.83□□□□□ -0.2
SHMT2-234ENST00000557703 GNSP15586 552 aa13.83□□□□□ -0.2
SHMT2-234ENST00000557703 ACSL1P33121 698 aa13.83□□□□□ -0.2
SHMT2-234ENST00000557703 ADPRHP54922 357 aa13.83□□□□□ -0.2
SHMT2-234ENST00000557703 OTUD4Q01804 1114 aaKnown RBP13.83□□□□□ -0.2
SHMT2-234ENST00000557703 ADCY2Q08462 1091 aa13.83□□□□□ -0.2
SHMT2-234ENST00000557703 UGP2Q16851 508 aa13.83□□□□□ -0.2
SHMT2-234ENST00000557703 ZNF569Q5MCW4 686 aa13.83□□□□□ -0.2
SHMT2-234ENST00000557703 PIP5KL1Q5T9C9 394 aa13.83□□□□□ -0.2
SHMT2-234ENST00000557703 DCAF12L1Q5VU92 463 aa13.83□□□□□ -0.2
SHMT2-234ENST00000557703 LYSMD4Q5XG99 296 aa13.83□□□□□ -0.2
SHMT2-234ENST00000557703 KIAA1161Q6NSJ0 714 aa13.83□□□□□ -0.2
SHMT2-234ENST00000557703 ERAP2Q6P179 960 aa13.83□□□□□ -0.2
SHMT2-234ENST00000557703 DRICH1Q6PGQ1 229 aaPredicted RBP13.83□□□□□ -0.2
SHMT2-234ENST00000557703 TTC7BQ86TV6 843 aa13.83□□□□□ -0.2
SHMT2-234ENST00000557703 SLC13A5Q86YT5 568 aaPredicted RBP13.83□□□□□ -0.2
SHMT2-234ENST00000557703 SYT12Q8IV01 421 aa13.83□□□□□ -0.2
SHMT2-234ENST00000557703 FAM160A2Q8N612 972 aaPredicted RBP13.83□□□□□ -0.2
SHMT2-234ENST00000557703 OR14C36Q8NHC7 312 aa13.83□□□□□ -0.2
SHMT2-234ENST00000557703 KLHL32Q96NJ5 620 aa13.83□□□□□ -0.2
SHMT2-234ENST00000557703 SRPK1Q96SB4 655 aaKnown RBP13.83□□□□□ -0.2
SHMT2-234ENST00000557703 GPR174Q9BXC1 333 aa13.83□□□□□ -0.2
SHMT2-234ENST00000557703 SLC25A51Q9H1U9 297 aa13.83□□□□□ -0.2
SHMT2-234ENST00000557703 NT5MQ9NPB1 228 aa13.83□□□□□ -0.2
SHMT2-234ENST00000557703 TRMT1Q9NXH9 659 aaKnown RBP13.83□□□□□ -0.2
SHMT2-234ENST00000557703 PHTF1Q9UMS5 762 aa13.83□□□□□ -0.2
SHMT2-234ENST00000557703 PPIL1Q9Y3C6 166 aa13.83□□□□□ -0.2
SHMT2-234ENST00000557703 CACNA1EQ15878 2313 aa13.82□□□□□ -0.2
SHMT2-234ENST00000557703 NUMA1Q14980 2115 aa13.82□□□□□ -0.2
SHMT2-234ENST00000557703 TBC1D3DA0A087WVF3 549 aa13.82□□□□□ -0.2
SHMT2-234ENST00000557703 TBC1D3IA0A087WXS9 549 aa13.82□□□□□ -0.2
SHMT2-234ENST00000557703 TBC1D3EA0A087X179 549 aa13.82□□□□□ -0.2
SHMT2-234ENST00000557703 TBC1D3KA0A087X1G2 549 aa13.82□□□□□ -0.2
SHMT2-234ENST00000557703 TBC1D3FA6NER0 549 aaPredicted RBP13.82□□□□□ -0.2
SHMT2-234ENST00000557703 TBC1D3LB9A6J9 549 aa13.82□□□□□ -0.2
SHMT2-234ENST00000557703 H7C0C1 242 aa13.82□□□□□ -0.2
SHMT2-234ENST00000557703 KCNK1O00180 336 aa13.82□□□□□ -0.2
SHMT2-234ENST00000557703 AREL1O15033 823 aa13.82□□□□□ -0.2
SHMT2-234ENST00000557703 MUSKO15146 869 aa13.82□□□□□ -0.2
SHMT2-234ENST00000557703 LATO43561 262 aa13.82□□□□□ -0.2
SHMT2-234ENST00000557703 TBC1D3HP0C7X1 549 aa13.82□□□□□ -0.2
SHMT2-234ENST00000557703 PECAM1P16284 738 aaPredicted RBP13.82□□□□□ -0.2
SHMT2-234ENST00000557703 TCP1P17987 556 aaKnown RBP13.82□□□□□ -0.2
SHMT2-234ENST00000557703 XPAP23025 273 aaPredicted RBP13.82□□□□□ -0.2
SHMT2-234ENST00000557703 CD27P26842 260 aa13.82□□□□□ -0.2
SHMT2-234ENST00000557703 ATP5OP48047 213 aa13.82□□□□□ -0.2
SHMT2-234ENST00000557703 EIF3EP60228 445 aaKnown RBP13.82□□□□□ -0.2
SHMT2-234ENST00000557703 RPS21P63220 83 aaKnown RBP13.82□□□□□ -0.2
SHMT2-234ENST00000557703 ITKQ08881 620 aa13.82□□□□□ -0.2
SHMT2-234ENST00000557703 KIAA0895LQ68EN5 471 aa13.82□□□□□ -0.2
SHMT2-234ENST00000557703 TBC1D3GQ6DHY5 549 aa13.82□□□□□ -0.2
SHMT2-234ENST00000557703 ITPRIPL1Q6GPH6 555 aa13.82□□□□□ -0.2
SHMT2-234ENST00000557703 TBC1D3CQ6IPX1 549 aa13.82□□□□□ -0.2
SHMT2-234ENST00000557703 NPNTQ6UXI9 565 aa13.82□□□□□ -0.2
SHMT2-234ENST00000557703 TBC1D3Q8IZP1 549 aaPredicted RBP13.82□□□□□ -0.2
SHMT2-234ENST00000557703 VOPP1Q96AW1 172 aa13.82□□□□□ -0.2
SHMT2-234ENST00000557703 ARRDC3Q96B67 414 aa13.82□□□□□ -0.2
SHMT2-234ENST00000557703 SKA1Q96BD8 255 aa13.82□□□□□ -0.2
SHMT2-234ENST00000557703 LRRC45Q96CN5 670 aa13.82□□□□□ -0.2
SHMT2-234ENST00000557703 SEMA3CQ99985 751 aa13.82□□□□□ -0.2
SHMT2-234ENST00000557703 NOD2Q9HC29 1040 aa13.82□□□□□ -0.2
SHMT2-234ENST00000557703 SAE1Q9UBE0 346 aaPredicted RBP13.82□□□□□ -0.2
SHMT2-234ENST00000557703 ZBTB32Q9Y2Y4 487 aaPredicted RBP13.82□□□□□ -0.2
SHMT2-234ENST00000557703 FADS3Q9Y5Q0 445 aa13.82□□□□□ -0.2
SHMT2-234ENST00000557703 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP13.82□□□□□ -0.28e-7■■□□□ 12.4
SHMT2-234ENST00000557703 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa13.81□□□□□ -0.2
SHMT2-234ENST00000557703 PRR23AA6NEV1 266 aa13.81□□□□□ -0.2
SHMT2-234ENST00000557703 UPK3BL1B0FP48 263 aa13.81□□□□□ -0.2
SHMT2-234ENST00000557703 UPK3BL2E5RIL1 263 aa13.81□□□□□ -0.2
SHMT2-234ENST00000557703 OPHN1O60890 802 aa13.81□□□□□ -0.2
SHMT2-234ENST00000557703 EPOP01588 193 aa13.81□□□□□ -0.2
SHMT2-234ENST00000557703 BCKDHBP21953 392 aa13.81□□□□□ -0.2
SHMT2-234ENST00000557703 PTPN3P26045 913 aa13.81□□□□□ -0.2
SHMT2-234ENST00000557703 RGRP47804 291 aa13.81□□□□□ -0.2
SHMT2-234ENST00000557703 OVGP1Q12889 678 aa13.81□□□□□ -0.2
SHMT2-234ENST00000557703 SRSF5Q13243 272 aaKnown RBP13.81□□□□□ -0.2
SHMT2-234ENST00000557703 ZNF211Q13398 564 aaPredicted RBP13.81□□□□□ -0.2
SHMT2-234ENST00000557703 CCNG2Q16589 344 aa13.81□□□□□ -0.2
SHMT2-234ENST00000557703 SETMARQ53H47 684 aaPredicted RBP13.81□□□□□ -0.2
SHMT2-234ENST00000557703 ARMC12Q5T9G4 340 aa13.81□□□□□ -0.2
SHMT2-234ENST00000557703 DARS2Q6PI48 645 aaKnown RBP13.81□□□□□ -0.2
SHMT2-234ENST00000557703 C4orf22Q6V702 233 aa13.81□□□□□ -0.2
SHMT2-234ENST00000557703 PARS2Q7L3T8 475 aaKnown RBP13.81□□□□□ -0.2
SHMT2-234ENST00000557703 CYP2U1Q7Z449 544 aa13.81□□□□□ -0.2
SHMT2-234ENST00000557703 PRPF39Q86UA1 669 aaKnown RBP13.81□□□□□ -0.2
SHMT2-234ENST00000557703 ZC3H18Q86VM9 953 aaKnown RBP13.81□□□□□ -0.2
SHMT2-234ENST00000557703 CAMK1DQ8IU85 385 aa13.81□□□□□ -0.2
SHMT2-234ENST00000557703 TMEFF1Q8IYR6 380 aa13.81□□□□□ -0.2
SHMT2-234ENST00000557703 PGBD5Q8N414 524 aa13.81□□□□□ -0.2
SHMT2-234ENST00000557703 RASGEF1CQ8N431 466 aa13.81□□□□□ -0.2
SHMT2-234ENST00000557703 NETO2Q8NC67 525 aa13.81□□□□□ -0.2
SHMT2-234ENST00000557703 SLC35B2Q8TB61 432 aa13.81□□□□□ -0.2
SHMT2-234ENST00000557703 ARRDC2Q8TBH0 407 aa13.81□□□□□ -0.2
SHMT2-234ENST00000557703 FAM122AQ96E09 287 aa13.81□□□□□ -0.2
SHMT2-234ENST00000557703 IMP4Q96G21 291 aaKnown RBP13.81□□□□□ -0.2
SHMT2-234ENST00000557703 EXOC2Q96KP1 924 aa13.81□□□□□ -0.2
SHMT2-234ENST00000557703 C1QTNF7Q9BXJ2 289 aa13.81□□□□□ -0.2
SHMT2-234ENST00000557703 ADGRE3Q9BY15 652 aa13.81□□□□□ -0.2
SHMT2-234ENST00000557703 NCDNQ9UBB6 729 aa13.81□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms