RNA–Protein interactions for RNA: ENST00000557511.5

PSEN1-223, Transcript of presenilin 1, humanhuman

TSL 5 BASIC

Gene PSEN1, Length 1,230 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSEN1-223ENST00000557511 SGCGQ13326 291 aa8.44□□□□□ -1.06
PSEN1-223ENST00000557511 TFDP2Q14188 446 aa8.44□□□□□ -1.06
PSEN1-223ENST00000557511 DPYSL3Q14195 570 aa8.44□□□□□ -1.06
PSEN1-223ENST00000557511 PUM1Q14671 1186 aaKnown RBP eCLIP8.44□□□□□ -1.06
PSEN1-223ENST00000557511 STAT4Q14765 748 aa8.44□□□□□ -1.06
PSEN1-223ENST00000557511 RSPO4Q2I0M5 234 aaPredicted RBP8.44□□□□□ -1.06
PSEN1-223ENST00000557511 UAP1L1Q3KQV9 507 aa8.44□□□□□ -1.06
PSEN1-223ENST00000557511 SETMARQ53H47 684 aaPredicted RBP8.44□□□□□ -1.06
PSEN1-223ENST00000557511 ZNF805Q5CZA5 627 aa8.44□□□□□ -1.06
PSEN1-223ENST00000557511 ATXN7L2Q5T6C5 722 aaPredicted RBP8.44□□□□□ -1.06
PSEN1-223ENST00000557511 CCDC181Q5TID7 509 aa8.44□□□□□ -1.06
PSEN1-223ENST00000557511 MARC1Q5VT66 337 aa8.44□□□□□ -1.06
PSEN1-223ENST00000557511 TXNRD3NBQ6F5E7 133 aa8.44□□□□□ -1.06
PSEN1-223ENST00000557511 C11orf63Q6NUN7 778 aa8.44□□□□□ -1.06
PSEN1-223ENST00000557511 ERAP2Q6P179 960 aa8.44□□□□□ -1.06
PSEN1-223ENST00000557511 SLC23A3Q6PIS1 610 aa8.44□□□□□ -1.06
PSEN1-223ENST00000557511 CYP4V2Q6ZWL3 525 aaPredicted RBP8.44□□□□□ -1.06
PSEN1-223ENST00000557511 TTC7BQ86TV6 843 aa8.44□□□□□ -1.06
PSEN1-223ENST00000557511 VSIG1Q86XK7 387 aa8.44□□□□□ -1.06
PSEN1-223ENST00000557511 CCDC50Q8IVM0 306 aa8.44□□□□□ -1.06
PSEN1-223ENST00000557511 SYCE1Q8N0S2 351 aa8.44□□□□□ -1.06
PSEN1-223ENST00000557511 OR6K2Q8NGY2 324 aa8.44□□□□□ -1.06
PSEN1-223ENST00000557511 KIAA1524Q8TCG1 905 aa8.44□□□□□ -1.06
PSEN1-223ENST00000557511 BIRC7Q96CA5 298 aa8.44□□□□□ -1.06
PSEN1-223ENST00000557511 RBM41Q96IZ5 413 aaKnown RBP8.44□□□□□ -1.06
PSEN1-223ENST00000557511 KLHL32Q96NJ5 620 aa8.44□□□□□ -1.06
PSEN1-223ENST00000557511 TUBGCP5Q96RT8 1024 aa8.44□□□□□ -1.06
PSEN1-223ENST00000557511 FERMT1Q9BQL6 677 aa8.44□□□□□ -1.06
PSEN1-223ENST00000557511 RTKNQ9BST9 563 aa8.44□□□□□ -1.06
PSEN1-223ENST00000557511 C1QTNF7Q9BXJ2 289 aa8.44□□□□□ -1.06
PSEN1-223ENST00000557511 TSGA10Q9BZW7 698 aa8.44□□□□□ -1.06
PSEN1-223ENST00000557511 SMOC1Q9H4F8 434 aa8.44□□□□□ -1.06
PSEN1-223ENST00000557511 NOL6Q9H6R4 1146 aaKnown RBP8.44□□□□□ -1.06
PSEN1-223ENST00000557511 ATP13A3Q9H7F0 1226 aa8.44□□□□□ -1.06
PSEN1-223ENST00000557511 KLHL11Q9NVR0 708 aa8.44□□□□□ -1.06
PSEN1-223ENST00000557511 SARDHQ9UL12 918 aa8.44□□□□□ -1.06
PSEN1-223ENST00000557511 DMTF1Q9Y222 760 aa8.44□□□□□ -1.06
PSEN1-223ENST00000557511 ALG6Q9Y672 507 aa8.44□□□□□ -1.06
PSEN1-223ENST00000557511 FANCMQ8IYD8 2048 aa8.44□□□□□ -1.06
PSEN1-223ENST00000557511 MYO18AQ92614 2054 aaKnown RBP8.43□□□□□ -1.06
PSEN1-223ENST00000557511 A0A1W2PPC4 97 aa8.43□□□□□ -1.06
PSEN1-223ENST00000557511 C16orf96A6NNT2 1141 aa8.43□□□□□ -1.06
PSEN1-223ENST00000557511 BTNL10A8MVZ5 291 aa8.43□□□□□ -1.06
PSEN1-223ENST00000557511 PATE3B3GLJ2 98 aa8.43□□□□□ -1.06
PSEN1-223ENST00000557511 PLK4O00444 970 aa8.43□□□□□ -1.06
PSEN1-223ENST00000557511 PPP1R12AO14974 1030 aaPredicted RBP8.43□□□□□ -1.06
PSEN1-223ENST00000557511 TSPAN6O43657 245 aa8.43□□□□□ -1.06
PSEN1-223ENST00000557511 KRT86O43790 486 aa8.43□□□□□ -1.06
PSEN1-223ENST00000557511 BUB1BO60566 1050 aaPredicted RBP8.43□□□□□ -1.06
PSEN1-223ENST00000557511 OPHN1O60890 802 aa8.43□□□□□ -1.06
PSEN1-223ENST00000557511 ZRANB2O95218 330 aaKnown RBP eCLIP8.43□□□□□ -1.06
PSEN1-223ENST00000557511 CER1O95813 267 aa8.43□□□□□ -1.06
PSEN1-223ENST00000557511 CD160O95971 181 aa8.43□□□□□ -1.06
PSEN1-223ENST00000557511 CTSLP07711 333 aa8.43□□□□□ -1.06
PSEN1-223ENST00000557511 ADRB3P13945 408 aa8.43□□□□□ -1.06
PSEN1-223ENST00000557511 TIMP2P16035 220 aa8.43□□□□□ -1.06
PSEN1-223ENST00000557511 AKT2P31751 481 aa8.43□□□□□ -1.06
PSEN1-223ENST00000557511 DRD3P35462 400 aa8.43□□□□□ -1.06
PSEN1-223ENST00000557511 CSNK1DP48730 415 aa8.43□□□□□ -1.06
PSEN1-223ENST00000557511 SCNN1BP51168 640 aa8.43□□□□□ -1.06
PSEN1-223ENST00000557511 AP1S1P61966 158 aa8.43□□□□□ -1.06
PSEN1-223ENST00000557511 RPS21P63220 83 aaKnown RBP8.43□□□□□ -1.06
PSEN1-223ENST00000557511 RACK1P63244 317 aaKnown RBP8.43□□□□□ -1.06
PSEN1-223ENST00000557511 IRX4P78413 519 aa8.43□□□□□ -1.06
PSEN1-223ENST00000557511 NSUN2Q08J23 767 aaKnown RBP eCLIP8.43□□□□□ -1.06
PSEN1-223ENST00000557511 ELP6Q0PNE2 266 aa8.43□□□□□ -1.06
PSEN1-223ENST00000557511 SUZ12Q15022 739 aaKnown RBP8.43□□□□□ -1.06
PSEN1-223ENST00000557511 PAFAH1B3Q15102 231 aaKnown RBP8.43□□□□□ -1.06
PSEN1-223ENST00000557511 CYTH1Q15438 398 aa8.43□□□□□ -1.06
PSEN1-223ENST00000557511 ATP13A4Q4VNC1 1196 aa8.43□□□□□ -1.06
PSEN1-223ENST00000557511 RALGPS1Q5JS13 557 aa8.43□□□□□ -1.06
PSEN1-223ENST00000557511 STPG1Q5TH74 334 aa8.43□□□□□ -1.06
PSEN1-223ENST00000557511 AGBL4Q5VU57 503 aa8.43□□□□□ -1.06
PSEN1-223ENST00000557511 PEAR1Q5VY43 1037 aaPredicted RBP8.43□□□□□ -1.06
PSEN1-223ENST00000557511 AFMIDQ63HM1 303 aa8.43□□□□□ -1.06
PSEN1-223ENST00000557511 TCEAL6Q6IPX3 200 aa8.43□□□□□ -1.06
PSEN1-223ENST00000557511 KIAA1161Q6NSJ0 714 aa8.43□□□□□ -1.06
PSEN1-223ENST00000557511 BRAT1Q6PJG6 821 aa8.43□□□□□ -1.06
PSEN1-223ENST00000557511 RAD9BQ6WBX8 426 aa8.43□□□□□ -1.06
PSEN1-223ENST00000557511 SRLQ86TD4 932 aa8.43□□□□□ -1.06
PSEN1-223ENST00000557511 TRIM69Q86WT6 500 aa8.43□□□□□ -1.06
PSEN1-223ENST00000557511 HORMAD1Q86X24 394 aa8.43□□□□□ -1.06
PSEN1-223ENST00000557511 ARHGAP12Q8IWW6 846 aa8.43□□□□□ -1.06
PSEN1-223ENST00000557511 NDUFAF2Q8N183 169 aa8.43□□□□□ -1.06
PSEN1-223ENST00000557511 NPWQ8N729 165 aa8.43□□□□□ -1.06
PSEN1-223ENST00000557511 UBL4BQ8N7F7 174 aa8.43□□□□□ -1.06
PSEN1-223ENST00000557511 ACRBPQ8NEB7 543 aa8.43□□□□□ -1.06
PSEN1-223ENST00000557511 FAM71BQ8TC56 605 aa8.43□□□□□ -1.06
PSEN1-223ENST00000557511 HCAR2Q8TDS4 363 aa8.43□□□□□ -1.06
PSEN1-223ENST00000557511 CXorf40AQ8TE69 158 aa8.43□□□□□ -1.06
PSEN1-223ENST00000557511 ZNF592Q92610 1267 aa8.43□□□□□ -1.06
PSEN1-223ENST00000557511 TCEAL3Q969E4 200 aa8.43□□□□□ -1.06
PSEN1-223ENST00000557511 ARRDC3Q96B67 414 aa8.43□□□□□ -1.06
PSEN1-223ENST00000557511 ITPKCQ96DU7 683 aa8.43□□□□□ -1.06
PSEN1-223ENST00000557511 SERAC1Q96JX3 654 aa8.43□□□□□ -1.06
PSEN1-223ENST00000557511 EXOC2Q96KP1 924 aa8.43□□□□□ -1.06
PSEN1-223ENST00000557511 ZNF641Q96N77 438 aaPredicted RBP8.43□□□□□ -1.06
PSEN1-223ENST00000557511 RNF157Q96PX1 679 aa8.43□□□□□ -1.06
PSEN1-223ENST00000557511 CPEB1Q9BZB8 566 aaKnown RBP8.43□□□□□ -1.06
PSEN1-223ENST00000557511 KLC2Q9H0B6 622 aa8.43□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms