RNA–Protein interactions for RNA: ENST00000557487.5

SHMT2-232, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 1 (best) BASIC

Gene SHMT2, Length 1,918 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-232ENST00000557487 TRIM67Q6ZTA4 783 aa16.45■□□□□ 0.22
SHMT2-232ENST00000557487 KIAA0408Q6ZU52 694 aa16.45■□□□□ 0.22
SHMT2-232ENST00000557487 LPCAT2Q7L5N7 544 aa16.45■□□□□ 0.22
SHMT2-232ENST00000557487 SLC41A1Q8IVJ1 513 aa16.45■□□□□ 0.22
SHMT2-232ENST00000557487 HERC6Q8IVU3 1022 aa16.45■□□□□ 0.22
SHMT2-232ENST00000557487 RBM12BQ8IXT5 1001 aaKnown RBP16.45■□□□□ 0.22
SHMT2-232ENST00000557487 PPHLN1Q8NEY8 458 aaKnown RBP16.45■□□□□ 0.22
SHMT2-232ENST00000557487 TNIP2Q8NFZ5 429 aa16.45■□□□□ 0.22
SHMT2-232ENST00000557487 ADAM32Q8TC27 787 aa16.45■□□□□ 0.22
SHMT2-232ENST00000557487 SPPL2BQ8TCT7 592 aa16.45■□□□□ 0.22
SHMT2-232ENST00000557487 ROPN1LQ96C74 230 aa16.45■□□□□ 0.22
SHMT2-232ENST00000557487 TMEM79Q9BSE2 394 aa16.45■□□□□ 0.22
SHMT2-232ENST00000557487 TRIM15Q9C019 465 aa16.45■□□□□ 0.22
SHMT2-232ENST00000557487 WDR6Q9NNW5 1121 aaKnown RBP16.45■□□□□ 0.22
SHMT2-232ENST00000557487 LMCD1Q9NZU5 365 aa16.45■□□□□ 0.22
SHMT2-232ENST00000557487 TSC2P49815 1807 aa16.44■□□□□ 0.22
SHMT2-232ENST00000557487 A0A087WXM4 84 aa16.44■□□□□ 0.22
SHMT2-232ENST00000557487 MANSC4A6NHS7 340 aaPredicted RBP16.44■□□□□ 0.22
SHMT2-232ENST00000557487 BBIP1A8MTZ0 92 aa16.44■□□□□ 0.22
SHMT2-232ENST00000557487 E7ENX8 843 aa16.44■□□□□ 0.22
SHMT2-232ENST00000557487 CXCL11O14625 94 aa16.44■□□□□ 0.22
SHMT2-232ENST00000557487 JUNP05412 331 aaKnown RBP16.44■□□□□ 0.22
SHMT2-232ENST00000557487 C7P10643 843 aa16.44■□□□□ 0.22
SHMT2-232ENST00000557487 CCR10P46092 362 aa16.44■□□□□ 0.22
SHMT2-232ENST00000557487 EMP3P54852 163 aa16.44■□□□□ 0.22
SHMT2-232ENST00000557487 CYTH1Q15438 398 aa16.44■□□□□ 0.22
SHMT2-232ENST00000557487 TSTD2Q5T7W7 516 aa16.44■□□□□ 0.22
SHMT2-232ENST00000557487 SYPL2Q5VXT5 272 aa16.44■□□□□ 0.22
SHMT2-232ENST00000557487 C8orf82Q6P1X6 216 aaPredicted RBP16.44■□□□□ 0.22
SHMT2-232ENST00000557487 TP53INP2Q8IXH6 220 aa16.44■□□□□ 0.22
SHMT2-232ENST00000557487 MFSD2AQ8NA29 543 aa16.44■□□□□ 0.22
SHMT2-232ENST00000557487 NETO2Q8NC67 525 aa16.44■□□□□ 0.22
SHMT2-232ENST00000557487 ADAMTS16Q8TE57 1224 aa16.44■□□□□ 0.22
SHMT2-232ENST00000557487 LPGAT1Q92604 370 aa16.44■□□□□ 0.22
SHMT2-232ENST00000557487 DPF3Q92784 378 aa16.44■□□□□ 0.22
SHMT2-232ENST00000557487 ZUFSPQ96AP4 578 aa16.44■□□□□ 0.22
SHMT2-232ENST00000557487 NXNL1Q96CM4 212 aa16.44■□□□□ 0.22
SHMT2-232ENST00000557487 RHOBTB2Q9BYZ6 727 aa16.44■□□□□ 0.22
SHMT2-232ENST00000557487 VTA1Q9NP79 307 aa16.44■□□□□ 0.22
SHMT2-232ENST00000557487 PDGFCQ9NRA1 345 aa16.44■□□□□ 0.22
SHMT2-232ENST00000557487 TMPRSS4Q9NRS4 437 aa16.44■□□□□ 0.22
SHMT2-232ENST00000557487 DNAAF2Q9NVR5 837 aaKnown RBP16.44■□□□□ 0.22
SHMT2-232ENST00000557487 TMEM181Q9P2C4 612 aa16.44■□□□□ 0.22
SHMT2-232ENST00000557487 ZNHIT2Q9UHR6 403 aa16.44■□□□□ 0.22
SHMT2-232ENST00000557487 CROTQ9UKG9 612 aa16.44■□□□□ 0.22
SHMT2-232ENST00000557487 NRCAMQ92823 1304 aa16.44■□□□□ 0.22
SHMT2-232ENST00000557487 SYNJ2BP-COX16A0A087WUM0 186 aa16.43■□□□□ 0.22
SHMT2-232ENST00000557487 HCRTO43612 131 aa16.43■□□□□ 0.22
SHMT2-232ENST00000557487 SRP72O76094 671 aaKnown RBP16.43■□□□□ 0.22
SHMT2-232ENST00000557487 RECQL4O94761 1208 aa16.43■□□□□ 0.22
SHMT2-232ENST00000557487 PGK1P00558 417 aa16.43■□□□□ 0.22
SHMT2-232ENST00000557487 RBP1P09455 135 aa16.43■□□□□ 0.22
SHMT2-232ENST00000557487 GABRB3P28472 473 aa16.43■□□□□ 0.22
SHMT2-232ENST00000557487 TTKP33981 857 aa16.43■□□□□ 0.22
SHMT2-232ENST00000557487 CD151P48509 253 aa16.43■□□□□ 0.22
SHMT2-232ENST00000557487 SLC12A2P55011 1212 aa16.43■□□□□ 0.22
SHMT2-232ENST00000557487 GRIK4Q16099 956 aa16.43■□□□□ 0.22
SHMT2-232ENST00000557487 FAM83EQ2M2I3 478 aa16.43■□□□□ 0.22
SHMT2-232ENST00000557487 XKR4Q5GH76 650 aa16.43■□□□□ 0.22
SHMT2-232ENST00000557487 PRMT9Q6P2P2 845 aa16.43■□□□□ 0.22
SHMT2-232ENST00000557487 GK5Q6ZS86 529 aa16.43■□□□□ 0.22
SHMT2-232ENST00000557487 CATSPER4Q7RTX7 472 aa16.43■□□□□ 0.22
SHMT2-232ENST00000557487 SLC22A9Q8IVM8 553 aa16.43■□□□□ 0.22
SHMT2-232ENST00000557487 NPWQ8N729 165 aa16.43■□□□□ 0.22
SHMT2-232ENST00000557487 SHCBP1Q8NEM2 672 aa16.43■□□□□ 0.22
SHMT2-232ENST00000557487 LRTOMTQ8WZ04 291 aa16.43■□□□□ 0.22
SHMT2-232ENST00000557487 FCRL5Q96RD9 977 aa16.43■□□□□ 0.22
SHMT2-232ENST00000557487 TBL1YQ9BQ87 522 aa16.43■□□□□ 0.22
SHMT2-232ENST00000557487 C16orf70Q9BSU1 422 aa16.43■□□□□ 0.22
SHMT2-232ENST00000557487 PRKD2Q9BZL6 878 aa16.43■□□□□ 0.22
SHMT2-232ENST00000557487 POMKQ9H5K3 350 aa16.43■□□□□ 0.22
SHMT2-232ENST00000557487 TRPC7Q9HCX4 862 aa16.43■□□□□ 0.22
SHMT2-232ENST00000557487 CNGB3Q9NQW8 809 aa16.43■□□□□ 0.22
SHMT2-232ENST00000557487 OLAHQ9NV23 265 aa16.43■□□□□ 0.22
SHMT2-232ENST00000557487 GTSE1Q9NYZ3 720 aa16.43■□□□□ 0.22
SHMT2-232ENST00000557487 COX16Q9P0S2 106 aa16.43■□□□□ 0.22
SHMT2-232ENST00000557487 FNDC1Q4ZHG4 1894 aaPredicted RBP16.43■□□□□ 0.22
SHMT2-232ENST00000557487 RBM47A0AV96 593 aaKnown RBP16.43■□□□□ 0.22
SHMT2-232ENST00000557487 RRN3P2A6NIE6 340 aa16.43■□□□□ 0.22
SHMT2-232ENST00000557487 FAM72CH0Y354 149 aa16.43■□□□□ 0.22
SHMT2-232ENST00000557487 HTRA2O43464 458 aaPredicted RBP16.43■□□□□ 0.22
SHMT2-232ENST00000557487 GPC4O75487 556 aa16.43■□□□□ 0.22
SHMT2-232ENST00000557487 TPH1P17752 444 aa16.43■□□□□ 0.22
SHMT2-232ENST00000557487 PTPN1P18031 435 aaKnown RBP16.43■□□□□ 0.22
SHMT2-232ENST00000557487 TCN1P20061 433 aaPredicted RBP16.43■□□□□ 0.22
SHMT2-232ENST00000557487 SAT1P21673 171 aa16.43■□□□□ 0.22
SHMT2-232ENST00000557487 PCSK6P29122 969 aa16.43■□□□□ 0.22
SHMT2-232ENST00000557487 PFKPQ01813 784 aa16.43■□□□□ 0.22
SHMT2-232ENST00000557487 SREBF2Q12772 1141 aa16.43■□□□□ 0.22
SHMT2-232ENST00000557487 NRF1Q16656 503 aa16.43■□□□□ 0.22
SHMT2-232ENST00000557487 INTS11Q5TA45 600 aaKnown RBP16.43■□□□□ 0.22
SHMT2-232ENST00000557487 FAM72AQ5TYM5 149 aa16.43■□□□□ 0.22
SHMT2-232ENST00000557487 AGAP9Q5VTM2 703 aa16.43■□□□□ 0.22
SHMT2-232ENST00000557487 KIAA0930Q6ICG6 404 aaPredicted RBP16.43■□□□□ 0.22
SHMT2-232ENST00000557487 FAM72DQ6L9T8 149 aa16.43■□□□□ 0.22
SHMT2-232ENST00000557487 DCLRE1AQ6PJP8 1040 aa16.43■□□□□ 0.22
SHMT2-232ENST00000557487 FAM72BQ86X60 149 aa16.43■□□□□ 0.22
SHMT2-232ENST00000557487 TERB1Q8NA31 727 aa16.43■□□□□ 0.22
SHMT2-232ENST00000557487 PCYOX1LQ8NBM8 494 aa16.43■□□□□ 0.22
SHMT2-232ENST00000557487 TXNDC5Q8NBS9 432 aaKnown RBP16.43■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 41 ms