RNA–Protein interactions for RNA: ENST00000557341.5

SNX6-210, Transcript of sorting nexin 6, humanhuman

TSL 5

Gene SNX6, Length 559 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX6-210ENST00000557341 USP29Q9HBJ7 922 aa14.35□□□□□ -0.11
SNX6-210ENST00000557341 RTN4Q9NQC3 1192 aaKnown RBP14.35□□□□□ -0.11
SNX6-210ENST00000557341 TAS2R14Q9NYV8 317 aa14.35□□□□□ -0.11
SNX6-210ENST00000557341 TMEM63CQ9P1W3 806 aa14.35□□□□□ -0.11
SNX6-210ENST00000557341 DKK3Q9UBP4 350 aa14.35□□□□□ -0.11
SNX6-210ENST00000557341 LHX3Q9UBR4 397 aa14.35□□□□□ -0.11
SNX6-210ENST00000557341 UBA2Q9UBT2 640 aaPredicted RBP14.35□□□□□ -0.11
SNX6-210ENST00000557341 MFHAS1Q9Y4C4 1052 aa14.35□□□□□ -0.11
SNX6-210ENST00000557341 AK5Q9Y6K8 562 aa14.35□□□□□ -0.11
SNX6-210ENST00000557341 ATRXP46100 2492 aa14.35□□□□□ -0.11
SNX6-210ENST00000557341 SMTNL1A8MU46 457 aa14.34□□□□□ -0.11
SNX6-210ENST00000557341 TMCO5BA8MYB1 307 aa14.34□□□□□ -0.11
SNX6-210ENST00000557341 K7ESM1 405 aa14.34□□□□□ -0.11
SNX6-210ENST00000557341 ATMINO43313 823 aaPredicted RBP14.34□□□□□ -0.11
SNX6-210ENST00000557341 NEBLO76041 1014 aa14.34□□□□□ -0.11
SNX6-210ENST00000557341 TM7SF2O76062 418 aa14.34□□□□□ -0.11
SNX6-210ENST00000557341 GP1BAP07359 652 aa14.34□□□□□ -0.11
SNX6-210ENST00000557341 XPAP23025 273 aaPredicted RBP14.34□□□□□ -0.11
SNX6-210ENST00000557341 IGFALSP35858 605 aa14.34□□□□□ -0.11
SNX6-210ENST00000557341 DUSP3P51452 185 aaPredicted RBP14.34□□□□□ -0.11
SNX6-210ENST00000557341 NDST2P52849 883 aa14.34□□□□□ -0.11
SNX6-210ENST00000557341 THOP1P52888 689 aa14.34□□□□□ -0.11
SNX6-210ENST00000557341 PFN3P60673 137 aa14.34□□□□□ -0.11
SNX6-210ENST00000557341 MAMLD1Q13495 774 aa14.34□□□□□ -0.11
SNX6-210ENST00000557341 PTK2BQ14289 1009 aa14.34□□□□□ -0.11
SNX6-210ENST00000557341 GRM3Q14832 879 aa14.34□□□□□ -0.11
SNX6-210ENST00000557341 ASIC2Q16515 512 aa14.34□□□□□ -0.11
SNX6-210ENST00000557341 ZCCHC8Q6NZY4 707 aaKnown RBP14.34□□□□□ -0.11
SNX6-210ENST00000557341 DNAAF5Q86Y56 855 aa14.34□□□□□ -0.11
SNX6-210ENST00000557341 FAM181AQ8N9Y4 354 aa14.34□□□□□ -0.11
SNX6-210ENST00000557341 BTN2A2Q8WVV5 523 aa14.34□□□□□ -0.11
SNX6-210ENST00000557341 DCBLD2Q96PD2 775 aa14.34□□□□□ -0.11
SNX6-210ENST00000557341 CPEB1Q9BZB8 566 aaKnown RBP14.34□□□□□ -0.11
SNX6-210ENST00000557341 LRRC19Q9H756 370 aa14.34□□□□□ -0.11
SNX6-210ENST00000557341 CAAP1Q9H8G2 361 aa14.34□□□□□ -0.11
SNX6-210ENST00000557341 PDFQ9HBH1 243 aa14.34□□□□□ -0.11
SNX6-210ENST00000557341 CSNK1G3Q9Y6M4 447 aa14.34□□□□□ -0.11
SNX6-210ENST00000557341 EEF2KO00418 725 aaKnown RBP14.33□□□□□ -0.12
SNX6-210ENST00000557341 TOR1BO14657 336 aa14.33□□□□□ -0.12
SNX6-210ENST00000557341 RIOK3O14730 519 aaKnown RBP14.33□□□□□ -0.12
SNX6-210ENST00000557341 AQP9O43315 295 aa14.33□□□□□ -0.12
SNX6-210ENST00000557341 RNF8O76064 485 aa14.33□□□□□ -0.12
SNX6-210ENST00000557341 PIGNO95427 931 aa14.33□□□□□ -0.12
SNX6-210ENST00000557341 JUNDP17535 347 aa14.33□□□□□ -0.12
SNX6-210ENST00000557341 ABCG1P45844 678 aa14.33□□□□□ -0.12
SNX6-210ENST00000557341 SUOXP51687 545 aa14.33□□□□□ -0.12
SNX6-210ENST00000557341 SEMG2Q02383 582 aa14.33□□□□□ -0.12
SNX6-210ENST00000557341 ELP6Q0PNE2 266 aa14.33□□□□□ -0.12
SNX6-210ENST00000557341 CFAP58Q5T655 872 aa14.33□□□□□ -0.12
SNX6-210ENST00000557341 PLEKHA7Q6IQ23 1121 aa14.33□□□□□ -0.12
SNX6-210ENST00000557341 KDM7AQ6ZMT4 941 aa14.33□□□□□ -0.12
SNX6-210ENST00000557341 VPS36Q86VN1 386 aa14.33□□□□□ -0.12
SNX6-210ENST00000557341 NETO2Q8NC67 525 aa14.33□□□□□ -0.12
SNX6-210ENST00000557341 CENPTQ96BT3 561 aa14.33□□□□□ -0.12
SNX6-210ENST00000557341 SNRNP25Q9BV90 132 aaKnown RBP14.33□□□□□ -0.12
SNX6-210ENST00000557341 DHX35Q9H5Z1 703 aaKnown RBP14.33□□□□□ -0.12
SNX6-210ENST00000557341 GPATCH2LQ9NWQ4 482 aa14.33□□□□□ -0.12
SNX6-210ENST00000557341 NCKIPSDQ9NZQ3 722 aa14.33□□□□□ -0.12
SNX6-210ENST00000557341 APOBEC3BQ9UH17 382 aaKnown RBP14.33□□□□□ -0.12
SNX6-210ENST00000557341 SMG1Q96Q15 3661 aaKnown RBP14.33□□□□□ -0.12
SNX6-210ENST00000557341 BAHCC1Q9P281 2608 aa14.32□□□□□ -0.12
SNX6-210ENST00000557341 KIF26BQ2KJY2 2108 aa14.32□□□□□ -0.12
SNX6-210ENST00000557341 A0A1W2PQC6 194 aa14.32□□□□□ -0.12
SNX6-210ENST00000557341 ARHGAP42A6NI28 874 aa14.32□□□□□ -0.12
SNX6-210ENST00000557341 INSIG1O15503 277 aa14.32□□□□□ -0.12
SNX6-210ENST00000557341 PRAMEF11O60813 436 aa14.32□□□□□ -0.12
SNX6-210ENST00000557341 MMP20O60882 483 aa14.32□□□□□ -0.12
SNX6-210ENST00000557341 MT-CO3P00414 261 aa14.32□□□□□ -0.12
SNX6-210ENST00000557341 HOXB3P14651 431 aaPredicted RBP14.32□□□□□ -0.12
SNX6-210ENST00000557341 YPEL5P62699 121 aa14.32□□□□□ -0.12
SNX6-210ENST00000557341 CYTH1Q15438 398 aa14.32□□□□□ -0.12
SNX6-210ENST00000557341 KLHL40Q2TBA0 621 aa14.32□□□□□ -0.12
SNX6-210ENST00000557341 TPRG1LQ5T0D9 272 aa14.32□□□□□ -0.12
SNX6-210ENST00000557341 ERMARDQ5T6L9 678 aa14.32□□□□□ -0.12
SNX6-210ENST00000557341 MACC1Q6ZN28 852 aa14.32□□□□□ -0.12
SNX6-210ENST00000557341 TP53I13Q8NBR0 393 aaPredicted RBP14.32□□□□□ -0.12
SNX6-210ENST00000557341 IFI44Q8TCB0 444 aa14.32□□□□□ -0.12
SNX6-210ENST00000557341 LMX1AQ8TE12 382 aa14.32□□□□□ -0.12
SNX6-210ENST00000557341 FNIP1Q8TF40 1166 aa14.32□□□□□ -0.12
SNX6-210ENST00000557341 CELF6Q96J87 481 aaKnown RBP14.32□□□□□ -0.12
SNX6-210ENST00000557341 DEPDC7Q96QD5 511 aa14.32□□□□□ -0.12
SNX6-210ENST00000557341 PEBP4Q96S96 227 aa14.32□□□□□ -0.12
SNX6-210ENST00000557341 WRAP53Q9BUR4 548 aaKnown RBP14.32□□□□□ -0.12
SNX6-210ENST00000557341 HAUS4Q9H6D7 363 aa14.32□□□□□ -0.12
SNX6-210ENST00000557341 SPASTQ9UBP0 616 aa14.32□□□□□ -0.12
SNX6-210ENST00000557341 KLF15Q9UIH9 416 aa14.32□□□□□ -0.12
SNX6-210ENST00000557341 SCINQ9Y6U3 715 aa14.32□□□□□ -0.12
SNX6-210ENST00000557341 PTPRQQ9UMZ3 2332 aa14.31□□□□□ -0.12
SNX6-210ENST00000557341 ZFC3H1O60293 1989 aaKnown RBP14.31□□□□□ -0.12
SNX6-210ENST00000557341 LY6G6EA0A0G2JKS1 128 aa14.31□□□□□ -0.12
SNX6-210ENST00000557341 TSPAN11A1L157 253 aa14.31□□□□□ -0.12
SNX6-210ENST00000557341 J3KR12 359 aa14.31□□□□□ -0.12
SNX6-210ENST00000557341 DAPK3O43293 454 aa14.31□□□□□ -0.12
SNX6-210ENST00000557341 TLX3O43711 291 aaPredicted RBP14.31□□□□□ -0.12
SNX6-210ENST00000557341 PRPSAP2O60256 369 aa14.31□□□□□ -0.12
SNX6-210ENST00000557341 OPA1O60313 960 aa14.31□□□□□ -0.12
SNX6-210ENST00000557341 BRINP1O60477 761 aa14.31□□□□□ -0.12
SNX6-210ENST00000557341 GZMAP12544 262 aa14.31□□□□□ -0.12
SNX6-210ENST00000557341 MYF5P13349 255 aa14.31□□□□□ -0.12
SNX6-210ENST00000557341 TIMP2P16035 220 aa14.31□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 19.3 ms