RNA–Protein interactions for RNA: ENST00000555806.5

NEDD1-208, Transcript of neural precursor cell expressed, developmentally down-regulated 1, humanhuman

TSL 4

Gene NEDD1, Length 565 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD1-208ENST00000555806 EPG5Q9HCE0 2579 aa18.63■□□□□ 0.57
NEDD1-208ENST00000555806 COL5A1P20908 1838 aaPredicted RBP18.63■□□□□ 0.57
NEDD1-208ENST00000555806 MYO1FO00160 1098 aa18.62■□□□□ 0.57
NEDD1-208ENST00000555806 FPGTO14772 594 aa18.62■□□□□ 0.57
NEDD1-208ENST00000555806 AREL1O15033 823 aa18.62■□□□□ 0.57
NEDD1-208ENST00000555806 SPINT1O43278 529 aa18.62■□□□□ 0.57
NEDD1-208ENST00000555806 TPM1P09493 284 aa18.62■□□□□ 0.57
NEDD1-208ENST00000555806 RARAP10276 462 aa18.62■□□□□ 0.57
NEDD1-208ENST00000555806 TIMP2P16035 220 aa18.62■□□□□ 0.57
NEDD1-208ENST00000555806 AMPD1P23109 780 aa18.62■□□□□ 0.57
NEDD1-208ENST00000555806 SLC22A18ASQ8N1D0 253 aa18.62■□□□□ 0.57
NEDD1-208ENST00000555806 LZTR1Q8N653 840 aa18.62■□□□□ 0.57
NEDD1-208ENST00000555806 ZNF564Q8TBZ8 553 aaPredicted RBP18.62■□□□□ 0.57
NEDD1-208ENST00000555806 BMFQ96LC9 184 aa18.62■□□□□ 0.57
NEDD1-208ENST00000555806 C1QTNF2Q9BXJ5 285 aa18.62■□□□□ 0.57
NEDD1-208ENST00000555806 DEF6Q9H4E7 631 aa18.62■□□□□ 0.57
NEDD1-208ENST00000555806 SUV39H2Q9H5I1 410 aa18.62■□□□□ 0.57
NEDD1-208ENST00000555806 IPO11Q9UI26 975 aaKnown RBP18.62■□□□□ 0.57
NEDD1-208ENST00000555806 FAM221BA6H8Z2 402 aa18.61■□□□□ 0.57
NEDD1-208ENST00000555806 POM121BA6NF01 834 aa18.61■□□□□ 0.57
NEDD1-208ENST00000555806 MMP20O60882 483 aa18.61■□□□□ 0.57
NEDD1-208ENST00000555806 ITIH2P19823 946 aa18.61■□□□□ 0.57
NEDD1-208ENST00000555806 HNRNPH3P31942 346 aaKnown RBP18.61■□□□□ 0.57
NEDD1-208ENST00000555806 SLC25A11Q02978 314 aaKnown RBP18.61■□□□□ 0.57
NEDD1-208ENST00000555806 IL10RBQ08334 325 aa18.61■□□□□ 0.57
NEDD1-208ENST00000555806 DNAJC3Q13217 504 aa18.61■□□□□ 0.57
NEDD1-208ENST00000555806 KRT81Q14533 505 aa18.61■□□□□ 0.57
NEDD1-208ENST00000555806 TSR1Q2NL82 804 aaKnown RBP18.61■□□□□ 0.57
NEDD1-208ENST00000555806 TXNRD3NBQ6F5E7 133 aa18.61■□□□□ 0.57
NEDD1-208ENST00000555806 TMCO3Q6UWJ1 677 aa18.61■□□□□ 0.57
NEDD1-208ENST00000555806 POLNQ7Z5Q5 900 aa18.61■□□□□ 0.57
NEDD1-208ENST00000555806 SRLQ86TD4 932 aa18.61■□□□□ 0.57
NEDD1-208ENST00000555806 DCP2Q8IU60 420 aaKnown RBP18.61■□□□□ 0.57
NEDD1-208ENST00000555806 TP53INP2Q8IXH6 220 aa18.61■□□□□ 0.57
NEDD1-208ENST00000555806 PAF1Q8N7H5 531 aa18.61■□□□□ 0.57
NEDD1-208ENST00000555806 TSEN2Q8NCE0 465 aaKnown RBP18.61■□□□□ 0.57
NEDD1-208ENST00000555806 DENND6BQ8NEG7 585 aa18.61■□□□□ 0.57
NEDD1-208ENST00000555806 TEKT4Q8WW24 435 aa18.61■□□□□ 0.57
NEDD1-208ENST00000555806 LENG8Q96PV6 779 aaPredicted RBP18.61■□□□□ 0.57
NEDD1-208ENST00000555806 CSPG4P5Q96PW8 444 aa18.61■□□□□ 0.57
NEDD1-208ENST00000555806 WRAP53Q9BUR4 548 aaKnown RBP18.61■□□□□ 0.57
NEDD1-208ENST00000555806 ZNHIT6Q9NWK9 470 aaKnown RBP18.61■□□□□ 0.57
NEDD1-208ENST00000555806 DNAJC28Q9NX36 388 aa18.61■□□□□ 0.57
NEDD1-208ENST00000555806 CTTNBP2NLQ9P2B4 639 aa18.61■□□□□ 0.57
NEDD1-208ENST00000555806 TMEM8BA6NDV4 472 aa18.6■□□□□ 0.57
NEDD1-208ENST00000555806 TM7SF2O76062 418 aa18.6■□□□□ 0.57
NEDD1-208ENST00000555806 DKK1O94907 266 aa18.6■□□□□ 0.57
NEDD1-208ENST00000555806 GJC1P36383 396 aa18.6■□□□□ 0.57
NEDD1-208ENST00000555806 RABIFP47224 123 aa18.6■□□□□ 0.57
NEDD1-208ENST00000555806 RGRP47804 291 aa18.6■□□□□ 0.57
NEDD1-208ENST00000555806 SUOXP51687 545 aa18.6■□□□□ 0.57
NEDD1-208ENST00000555806 ELP6Q0PNE2 266 aa18.6■□□□□ 0.57
NEDD1-208ENST00000555806 RFTN1Q14699 578 aaPredicted RBP18.6■□□□□ 0.57
NEDD1-208ENST00000555806 HADHQ16836 314 aaKnown RBP18.6■□□□□ 0.57
NEDD1-208ENST00000555806 HS1BP3Q53T59 392 aa18.6■□□□□ 0.57
NEDD1-208ENST00000555806 ZNF542PQ5EBM4 170 aa18.6■□□□□ 0.57
NEDD1-208ENST00000555806 DHRS13Q6UX07 377 aa18.6■□□□□ 0.57
NEDD1-208ENST00000555806 KANSL1Q7Z3B3 1105 aa18.6■□□□□ 0.57
NEDD1-208ENST00000555806 CAMK1DQ8IU85 385 aa18.6■□□□□ 0.57
NEDD1-208ENST00000555806 OR8K1Q8NGG5 319 aa18.6■□□□□ 0.57
NEDD1-208ENST00000555806 ASB12Q8WXK4 309 aa18.6■□□□□ 0.57
NEDD1-208ENST00000555806 CTNNBL1Q8WYA6 563 aaPredicted RBP18.6■□□□□ 0.57
NEDD1-208ENST00000555806 TUBGCP5Q96RT8 1024 aa18.6■□□□□ 0.57
NEDD1-208ENST00000555806 KLF6Q99612 283 aaPredicted RBP18.6■□□□□ 0.57
NEDD1-208ENST00000555806 C1QTNF7Q9BXJ2 289 aa18.6■□□□□ 0.57
NEDD1-208ENST00000555806 ATP13A3Q9H7F0 1226 aa18.6■□□□□ 0.57
NEDD1-208ENST00000555806 PCDH18Q9HCL0 1135 aa18.6■□□□□ 0.57
NEDD1-208ENST00000555806 ETNK2Q9NVF9 386 aa18.6■□□□□ 0.57
NEDD1-208ENST00000555806 FRYQ5TBA9 3013 aa18.6■□□□□ 0.57
NEDD1-208ENST00000555806 TSPAN11A1L157 253 aa18.59■□□□□ 0.57
NEDD1-208ENST00000555806 H2AFZP0C0S5 128 aa18.59■□□□□ 0.57
NEDD1-208ENST00000555806 SERPINA4P29622 427 aa18.59■□□□□ 0.57
NEDD1-208ENST00000555806 CSNK1DP48730 415 aa18.59■□□□□ 0.57
NEDD1-208ENST00000555806 CDH6P55285 790 aa18.59■□□□□ 0.57
NEDD1-208ENST00000555806 PDE1CQ14123 709 aaPredicted RBP18.59■□□□□ 0.57
NEDD1-208ENST00000555806 LBRQ14739 615 aaKnown RBP18.59■□□□□ 0.57
NEDD1-208ENST00000555806 SLC18A3Q16572 532 aa18.59■□□□□ 0.57
NEDD1-208ENST00000555806 TMCO4Q5TGY1 634 aa18.59■□□□□ 0.57
NEDD1-208ENST00000555806 ERAP2Q6P179 960 aa18.59■□□□□ 0.57
NEDD1-208ENST00000555806 BRAT1Q6PJG6 821 aa18.59■□□□□ 0.57
NEDD1-208ENST00000555806 CCNI2Q6ZMN8 369 aaPredicted RBP18.59■□□□□ 0.57
NEDD1-208ENST00000555806 H2AFVQ71UI9 128 aa18.59■□□□□ 0.57
NEDD1-208ENST00000555806 TMPRSS7Q7RTY8 843 aa18.59■□□□□ 0.57
NEDD1-208ENST00000555806 VSTM4Q8IW00 320 aa18.59■□□□□ 0.57
NEDD1-208ENST00000555806 GALNT15Q8N3T1 639 aa18.59■□□□□ 0.57
NEDD1-208ENST00000555806 HCAR2Q8TDS4 363 aa18.59■□□□□ 0.57
NEDD1-208ENST00000555806 ZCCHC14Q8WYQ9 949 aaKnown RBP18.59■□□□□ 0.57
NEDD1-208ENST00000555806 ZNF641Q96N77 438 aaPredicted RBP18.59■□□□□ 0.57
NEDD1-208ENST00000555806 DNAJC7Q99615 494 aa18.59■□□□□ 0.57
NEDD1-208ENST00000555806 PACSIN1Q9BY11 444 aa18.59■□□□□ 0.57
NEDD1-208ENST00000555806 PCDH12Q9NPG4 1184 aa18.59■□□□□ 0.57
NEDD1-208ENST00000555806 SEPT3Q9UH03 358 aa18.59■□□□□ 0.57
NEDD1-208ENST00000555806 NENFQ9UMX5 172 aa18.59■□□□□ 0.57
NEDD1-208ENST00000555806 AKAP13Q12802 2813 aa18.59■□□□□ 0.57
NEDD1-208ENST00000555806 FFAR2O15552 330 aa18.58■□□□□ 0.56
NEDD1-208ENST00000555806 AKR1B10O60218 316 aa18.58■□□□□ 0.56
NEDD1-208ENST00000555806 BUB1BO60566 1050 aaPredicted RBP18.58■□□□□ 0.56
NEDD1-208ENST00000555806 RFPL3O75679 317 aa18.58■□□□□ 0.56
NEDD1-208ENST00000555806 PIAS2O75928 621 aa18.58■□□□□ 0.56
NEDD1-208ENST00000555806 DGKAP23743 735 aa18.58■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 39.3 ms