RNA–Protein interactions for RNA: ENST00000555609.5

TUBB3-209, Transcript of tubulin beta 3 class III, humanhuman

TSL 3

Gene TUBB3, Length 1,855 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBB3-209ENST00000555609 MAPRE1Q15691 268 aaKnown RBP16.33■□□□□ 0.2
TUBB3-209ENST00000555609 CCL15Q16663 113 aa16.33■□□□□ 0.2
TUBB3-209ENST00000555609 MANEALQ5VSG8 457 aa16.33■□□□□ 0.2
TUBB3-209ENST00000555609 AFMIDQ63HM1 303 aa16.33■□□□□ 0.2
TUBB3-209ENST00000555609 RWDD4Q6NW29 188 aaKnown RBP16.33■□□□□ 0.2
TUBB3-209ENST00000555609 CEP97Q8IW35 865 aa16.33■□□□□ 0.2
TUBB3-209ENST00000555609 CCNYL1Q8N7R7 359 aa16.33■□□□□ 0.2
TUBB3-209ENST00000555609 IPMKQ8NFU5 416 aa16.33■□□□□ 0.2
TUBB3-209ENST00000555609 EDEM1Q92611 657 aa16.33■□□□□ 0.2
TUBB3-209ENST00000555609 PRICKLE1Q96MT3 831 aaPredicted RBP16.33■□□□□ 0.2
TUBB3-209ENST00000555609 PARK7Q99497 189 aaKnown RBP16.33■□□□□ 0.2
TUBB3-209ENST00000555609 TRPC7Q9HCX4 862 aa16.33■□□□□ 0.2
TUBB3-209ENST00000555609 ABCC13Q9NSE7 274 aa16.33■□□□□ 0.2
TUBB3-209ENST00000555609 DSEQ9UL01 958 aa16.33■□□□□ 0.2
TUBB3-209ENST00000555609 MAGED2Q9UNF1 606 aaPredicted RBP16.33■□□□□ 0.2
TUBB3-209ENST00000555609 AP4B1Q9Y6B7 739 aa16.33■□□□□ 0.2
TUBB3-209ENST00000555609 ZNF638Q14966 1978 aaKnown RBP16.33■□□□□ 0.2
TUBB3-209ENST00000555609 HEATR9A2RTY3 570 aa16.32■□□□□ 0.2
TUBB3-209ENST00000555609 WASH4PA8MWX3 477 aa16.32■□□□□ 0.2
TUBB3-209ENST00000555609 PDLIM1O00151 329 aa16.32■□□□□ 0.2
TUBB3-209ENST00000555609 CFLARO15519 480 aa16.32■□□□□ 0.2
TUBB3-209ENST00000555609 IRAK2O43187 625 aa16.32■□□□□ 0.2
TUBB3-209ENST00000555609 CLPTM1O96005 669 aa16.32■□□□□ 0.2
TUBB3-209ENST00000555609 CYP11A1P05108 521 aa16.32■□□□□ 0.2
TUBB3-209ENST00000555609 CPB1P15086 417 aa16.32■□□□□ 0.2
TUBB3-209ENST00000555609 GRIA2P42262 883 aa16.32■□□□□ 0.2
TUBB3-209ENST00000555609 SLC1A2P43004 574 aa16.32■□□□□ 0.2
TUBB3-209ENST00000555609 PSME3P61289 254 aa16.32■□□□□ 0.2
TUBB3-209ENST00000555609 MS4A2Q01362 244 aa16.32■□□□□ 0.2
TUBB3-209ENST00000555609 CTBP1Q13363 440 aa16.32■□□□□ 0.2
TUBB3-209ENST00000555609 TRIM25Q14258 630 aaKnown RBP16.32■□□□□ 0.2
TUBB3-209ENST00000555609 PTK2BQ14289 1009 aa16.32■□□□□ 0.2
TUBB3-209ENST00000555609 PPP2R5DQ14738 602 aa16.32■□□□□ 0.2
TUBB3-209ENST00000555609 POU6F1Q14863 301 aa16.32■□□□□ 0.2
TUBB3-209ENST00000555609 PDCD2Q16342 344 aaPredicted RBP16.32■□□□□ 0.2
TUBB3-209ENST00000555609 TECRLQ5HYJ1 363 aa16.32■□□□□ 0.2
TUBB3-209ENST00000555609 NEPROQ6NW34 567 aa16.32■□□□□ 0.2
TUBB3-209ENST00000555609 DENND6AQ8IWF6 608 aa16.32■□□□□ 0.2
TUBB3-209ENST00000555609 TXNDC5Q8NBS9 432 aaKnown RBP16.32■□□□□ 0.2
TUBB3-209ENST00000555609 SPATA22Q8NHS9 363 aa16.32■□□□□ 0.2
TUBB3-209ENST00000555609 HEXDCQ8WVB3 486 aa16.32■□□□□ 0.2
TUBB3-209ENST00000555609 MYLPFQ96A32 169 aa16.32■□□□□ 0.2
TUBB3-209ENST00000555609 POMKQ9H5K3 350 aa16.32■□□□□ 0.2
TUBB3-209ENST00000555609 IGSF5Q9NSI5 407 aa16.32■□□□□ 0.2
TUBB3-209ENST00000555609 SNX10Q9Y5X0 201 aa16.32■□□□□ 0.2
TUBB3-209ENST00000555609 CEP350Q5VT06 3117 aa16.32■□□□□ 0.2
TUBB3-209ENST00000555609 ARHGEF37A1IGU5 675 aa16.31■□□□□ 0.2
TUBB3-209ENST00000555609 M0QZ92 97 aa16.31■□□□□ 0.2
TUBB3-209ENST00000555609 LTA4HP09960 611 aaKnown RBP16.31■□□□□ 0.2
TUBB3-209ENST00000555609 CCR1P32246 355 aa16.31■□□□□ 0.2
TUBB3-209ENST00000555609 CCR10P46092 362 aa16.31■□□□□ 0.2
TUBB3-209ENST00000555609 LEPRP48357 1165 aaKnown RBP16.31■□□□□ 0.2
TUBB3-209ENST00000555609 ACAP2Q15057 778 aa16.31■□□□□ 0.2
TUBB3-209ENST00000555609 BORAQ6PGQ7 559 aa16.31■□□□□ 0.2
TUBB3-209ENST00000555609 MFSD6LQ8IWD5 586 aa16.31■□□□□ 0.2
TUBB3-209ENST00000555609 TMEM102Q8N9M5 508 aaPredicted RBP16.31■□□□□ 0.2
TUBB3-209ENST00000555609 SPPL2BQ8TCT7 592 aa16.31■□□□□ 0.2
TUBB3-209ENST00000555609 USP33Q8TEY7 942 aa16.31■□□□□ 0.2
TUBB3-209ENST00000555609 ZFP42Q96MM3 310 aa16.31■□□□□ 0.2
TUBB3-209ENST00000555609 FSD1LQ9BXM9 530 aa16.31■□□□□ 0.2
TUBB3-209ENST00000555609 COPS7BQ9H9Q2 264 aaPredicted RBP16.31■□□□□ 0.2
TUBB3-209ENST00000555609 FAM105AQ9NUU6 356 aa16.31■□□□□ 0.2
TUBB3-209ENST00000555609 TMEM30AQ9NV96 361 aa16.31■□□□□ 0.2
TUBB3-209ENST00000555609 PTTG2Q9NZH5 202 aa16.31■□□□□ 0.2
TUBB3-209ENST00000555609 THEGQ9P2T0 379 aa16.31■□□□□ 0.2
TUBB3-209ENST00000555609 IPO13O94829 963 aaKnown RBP16.31■□□□□ 0.2
TUBB3-209ENST00000555609 F7P08709 466 aaPredicted RBP16.31■□□□□ 0.2
TUBB3-209ENST00000555609 FAM58BPP0C7Q3 252 aa16.31■□□□□ 0.2
TUBB3-209ENST00000555609 CLCNKBP51801 687 aa16.31■□□□□ 0.2
TUBB3-209ENST00000555609 PKNOX1P55347 436 aa16.31■□□□□ 0.2
TUBB3-209ENST00000555609 TMEM198Q66K66 360 aa16.31■□□□□ 0.2
TUBB3-209ENST00000555609 OMDQ99983 421 aa16.31■□□□□ 0.2
TUBB3-209ENST00000555609 SLC39A8Q9C0K1 460 aa16.31■□□□□ 0.2
TUBB3-209ENST00000555609 AP5M1Q9H0R1 490 aa16.31■□□□□ 0.2
TUBB3-209ENST00000555609 SLC25A51Q9H1U9 297 aa16.31■□□□□ 0.2
TUBB3-209ENST00000555609 RBM22Q9NW64 420 aaKnown RBP eCLIP16.31■□□□□ 0.2
TUBB3-209ENST00000555609 ETAA1Q9NY74 926 aa16.31■□□□□ 0.2
TUBB3-209ENST00000555609 GTSE1Q9NYZ3 720 aa16.31■□□□□ 0.2
TUBB3-209ENST00000555609 IPO11Q9UI26 975 aaKnown RBP16.31■□□□□ 0.2
TUBB3-209ENST00000555609 G3BP2Q9UN86 482 aaKnown RBP16.31■□□□□ 0.2
TUBB3-209ENST00000555609 LZTS1Q9Y250 596 aa16.31■□□□□ 0.2
TUBB3-209ENST00000555609 TNPO2O14787 897 aaKnown RBP16.3■□□□□ 0.2
TUBB3-209ENST00000555609 UBDO15205 165 aa16.3■□□□□ 0.2
TUBB3-209ENST00000555609 MT-CYBP00156 380 aaPredicted RBP16.3■□□□□ 0.2
TUBB3-209ENST00000555609 RPLP2P05387 115 aaKnown RBP16.3■□□□□ 0.2
TUBB3-209ENST00000555609 MYL3P08590 195 aa16.3■□□□□ 0.2
TUBB3-209ENST00000555609 HOXB8P17481 243 aaPredicted RBP16.3■□□□□ 0.2
TUBB3-209ENST00000555609 DPP6P42658 865 aa16.3■□□□□ 0.2
TUBB3-209ENST00000555609 ACADVLP49748 655 aa16.3■□□□□ 0.2
TUBB3-209ENST00000555609 RHDQ02161 417 aa16.3■□□□□ 0.2
TUBB3-209ENST00000555609 SULT2A1Q06520 285 aa16.3■□□□□ 0.2
TUBB3-209ENST00000555609 LRP8Q14114 963 aa16.3■□□□□ 0.2
TUBB3-209ENST00000555609 ZNF470Q6ECI4 717 aa16.3■□□□□ 0.2
TUBB3-209ENST00000555609 FAM45BPQ6NSW5 357 aa16.3■□□□□ 0.2
TUBB3-209ENST00000555609 MRPL10Q7Z7H8 261 aaKnown RBP16.3■□□□□ 0.2
TUBB3-209ENST00000555609 FAM45AQ8TCE6 357 aa16.3■□□□□ 0.2
TUBB3-209ENST00000555609 BRI3BPQ8WY22 251 aa16.3■□□□□ 0.2
TUBB3-209ENST00000555609 MRGPRX2Q96LB1 330 aa16.3■□□□□ 0.2
TUBB3-209ENST00000555609 PPP1R36Q96LQ0 422 aa16.3■□□□□ 0.2
TUBB3-209ENST00000555609 ASB2Q96Q27 587 aa16.3■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 49.5 ms