RNA–Protein interactions for RNA: ENST00000555557.5

SRP54-208, Transcript of signal recognition particle 54, humanhuman

TSL 2 BASIC

Gene SRP54, Length 1,949 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54-208ENST00000555557 CFAP36Q96G28 342 aa10.31□□□□□ -0.76
SRP54-208ENST00000555557 PPP1R2P1Q96PQ5 205 aa10.31□□□□□ -0.76
SRP54-208ENST00000555557 SMIM14Q96QK8 99 aa10.31□□□□□ -0.76
SRP54-208ENST00000555557 FRMD8Q9BZ67 464 aaPredicted RBP10.31□□□□□ -0.76
SRP54-208ENST00000555557 HAUS2Q9NVX0 235 aa10.31□□□□□ -0.76
SRP54-208ENST00000555557 PLA2G4CQ9UP65 541 aa10.31□□□□□ -0.76
SRP54-208ENST00000555557 RAI2Q9Y5P3 530 aa10.31□□□□□ -0.76
SRP54-208ENST00000555557 LOC285095A0A1B0GVY8 99 aa10.31□□□□□ -0.76
SRP54-208ENST00000555557 SDR42E2A6NKP2 422 aa10.31□□□□□ -0.76
SRP54-208ENST00000555557 MAP2K7O14733 419 aa10.31□□□□□ -0.76
SRP54-208ENST00000555557 EIF3HO15372 352 aaKnown RBP eCLIP10.31□□□□□ -0.764e-6■■■■■ 29.2
SRP54-208ENST00000555557 PIAS1O75925 651 aa10.31□□□□□ -0.76
SRP54-208ENST00000555557 CPP00450 1065 aa10.31□□□□□ -0.76
SRP54-208ENST00000555557 PRLP01236 227 aa10.31□□□□□ -0.76
SRP54-208ENST00000555557 ATXN1LP0C7T5 689 aaKnown RBP10.31□□□□□ -0.76
SRP54-208ENST00000555557 HLA-EP13747 358 aa10.31□□□□□ -0.76
SRP54-208ENST00000555557 NNMTP40261 264 aa10.31□□□□□ -0.76
SRP54-208ENST00000555557 POU6F1Q14863 301 aa10.31□□□□□ -0.76
SRP54-208ENST00000555557 PTPRRQ15256 657 aa10.31□□□□□ -0.76
SRP54-208ENST00000555557 SLC1A5Q15758 541 aa10.31□□□□□ -0.76
SRP54-208ENST00000555557 DNAJC21Q5F1R6 531 aaKnown RBP10.31□□□□□ -0.76
SRP54-208ENST00000555557 SIRPB2Q5JXA9 342 aa10.31□□□□□ -0.76
SRP54-208ENST00000555557 DPY19L3Q6ZPD9 716 aa10.31□□□□□ -0.76
SRP54-208ENST00000555557 C3orf62Q6ZUJ4 267 aa10.31□□□□□ -0.76
SRP54-208ENST00000555557 METTL3Q86U44 580 aaKnown RBP10.31□□□□□ -0.76
SRP54-208ENST00000555557 PALM2Q8IXS6 379 aa10.31□□□□□ -0.76
SRP54-208ENST00000555557 CHST14Q8NCH0 376 aa10.31□□□□□ -0.76
SRP54-208ENST00000555557 MAFAQ8NHW3 353 aaPredicted RBP10.31□□□□□ -0.76
SRP54-208ENST00000555557 VOPP1Q96AW1 172 aa10.31□□□□□ -0.76
SRP54-208ENST00000555557 ZIM3Q96PE6 472 aa10.31□□□□□ -0.76
SRP54-208ENST00000555557 EBNA1BP2Q99848 306 aaKnown RBP10.31□□□□□ -0.76
SRP54-208ENST00000555557 TDRD1Q9BXT4 1180 aaKnown RBP10.31□□□□□ -0.76
SRP54-208ENST00000555557 VPS37BQ9H9H4 285 aa10.31□□□□□ -0.76
SRP54-208ENST00000555557 PLAC1Q9HBJ0 212 aa10.31□□□□□ -0.76
SRP54-208ENST00000555557 BFARQ9NZS9 450 aa10.31□□□□□ -0.76
SRP54-208ENST00000555557 HCN2Q9UL51 889 aa10.31□□□□□ -0.76
SRP54-208ENST00000555557 PLAAQ9Y263 795 aa10.31□□□□□ -0.76
SRP54-208ENST00000555557 COL4A3Q01955 1670 aa10.31□□□□□ -0.76
SRP54-208ENST00000555557 KIF26AQ9ULI4 1882 aaPredicted RBP10.3□□□□□ -0.76
SRP54-208ENST00000555557 CXorf51AA0A1B0GTR3 108 aa10.3□□□□□ -0.76
SRP54-208ENST00000555557 SPECC1L-ADORA2AF8WAN1 911 aa10.3□□□□□ -0.76
SRP54-208ENST00000555557 IGSF6O95976 241 aa10.3□□□□□ -0.76
SRP54-208ENST00000555557 PIRTP0C851 137 aa10.3□□□□□ -0.76
SRP54-208ENST00000555557 CES1P23141 567 aa10.3□□□□□ -0.76
SRP54-208ENST00000555557 SLC8A1P32418 973 aa10.3□□□□□ -0.76
SRP54-208ENST00000555557 GRIA2P42262 883 aa10.3□□□□□ -0.76
SRP54-208ENST00000555557 CCNHP51946 323 aaPredicted RBP10.3□□□□□ -0.76
SRP54-208ENST00000555557 SNRPD1P62314 119 aaKnown RBP10.3□□□□□ -0.76
SRP54-208ENST00000555557 SMAD1Q15797 465 aaKnown RBP10.3□□□□□ -0.76
SRP54-208ENST00000555557 MYLK3Q32MK0 819 aa10.3□□□□□ -0.76
SRP54-208ENST00000555557 FNDC3BQ53EP0 1204 aaKnown RBP10.3□□□□□ -0.76
SRP54-208ENST00000555557 CARD16Q5EG05 197 aa10.3□□□□□ -0.76
SRP54-208ENST00000555557 CFAP58Q5T655 872 aa10.3□□□□□ -0.76
SRP54-208ENST00000555557 CEP128Q6ZU80 1094 aa10.3□□□□□ -0.76
SRP54-208ENST00000555557 IQCKQ8N0W5 287 aa10.3□□□□□ -0.76
SRP54-208ENST00000555557 PCDH20Q8N6Y1 951 aaKnown RBP10.3□□□□□ -0.76
SRP54-208ENST00000555557 LPCAT1Q8NF37 534 aa10.3□□□□□ -0.76
SRP54-208ENST00000555557 OR2A12Q8NGT7 310 aa10.3□□□□□ -0.76
SRP54-208ENST00000555557 PTPRN2Q92932 1015 aa10.3□□□□□ -0.76
SRP54-208ENST00000555557 ISG20Q96AZ6 181 aaKnown RBP10.3□□□□□ -0.76
SRP54-208ENST00000555557 TRIB3Q96RU7 358 aa10.3□□□□□ -0.76
SRP54-208ENST00000555557 ACOX2Q99424 681 aa10.3□□□□□ -0.76
SRP54-208ENST00000555557 P2RY13Q9BPV8 354 aa10.3□□□□□ -0.76
SRP54-208ENST00000555557 PHACTR1Q9C0D0 580 aa10.3□□□□□ -0.76
SRP54-208ENST00000555557 CEP44Q9C0F1 390 aa10.3□□□□□ -0.76
SRP54-208ENST00000555557 CHRAC1Q9NRG0 131 aa10.3□□□□□ -0.76
SRP54-208ENST00000555557 ZC3H7BQ9UGR2 993 aaKnown RBP10.3□□□□□ -0.76
SRP54-208ENST00000555557 A0A0U1RQS6 177 aa10.29□□□□□ -0.76
SRP54-208ENST00000555557 PALM2-AKAP2B1ALY0 433 aaPredicted RBP10.29□□□□□ -0.76
SRP54-208ENST00000555557 ASLP04424 464 aa10.29□□□□□ -0.76
SRP54-208ENST00000555557 APODP05090 189 aa10.29□□□□□ -0.76
SRP54-208ENST00000555557 SRPRAP08240 638 aaKnown RBP10.29□□□□□ -0.76
SRP54-208ENST00000555557 CTHP32929 405 aa10.29□□□□□ -0.76
SRP54-208ENST00000555557 EIF2DP41214 584 aaKnown RBP10.29□□□□□ -0.76
SRP54-208ENST00000555557 CSNK1DP48730 415 aa10.29□□□□□ -0.76
SRP54-208ENST00000555557 NPY2RP49146 381 aa10.29□□□□□ -0.76
SRP54-208ENST00000555557 SEC13P55735 322 aa10.29□□□□□ -0.76
SRP54-208ENST00000555557 ST8SIA6P61647 398 aa10.29□□□□□ -0.76
SRP54-208ENST00000555557 AP1S1P61966 158 aa10.29□□□□□ -0.76
SRP54-208ENST00000555557 BCL2L1Q07817 233 aa10.29□□□□□ -0.76
SRP54-208ENST00000555557 MSLNQ13421 630 aaPredicted RBP10.29□□□□□ -0.76
SRP54-208ENST00000555557 ZNF234Q14588 700 aa10.29□□□□□ -0.76
SRP54-208ENST00000555557 PON2Q15165 354 aa10.29□□□□□ -0.76
SRP54-208ENST00000555557 EGFLAMQ63HQ2 1017 aa10.29□□□□□ -0.76
SRP54-208ENST00000555557 UNC5AQ6ZN44 842 aa10.29□□□□□ -0.76
SRP54-208ENST00000555557 UNC5BQ8IZJ1 945 aa10.29□□□□□ -0.76
SRP54-208ENST00000555557 EZH1Q92800 747 aaPredicted RBP10.29□□□□□ -0.76
SRP54-208ENST00000555557 RMDN1Q96DB5 314 aa10.29□□□□□ -0.76
SRP54-208ENST00000555557 STAMBPL1Q96FJ0 436 aa10.29□□□□□ -0.76
SRP54-208ENST00000555557 FEM1CQ96JP0 617 aa10.29□□□□□ -0.76
SRP54-208ENST00000555557 ZNF778Q96MU6 729 aa10.29□□□□□ -0.76
SRP54-208ENST00000555557 ZDHHC6Q9H6R6 413 aa10.29□□□□□ -0.76
SRP54-208ENST00000555557 ARNT2Q9HBZ2 717 aa10.29□□□□□ -0.76
SRP54-208ENST00000555557 IL1RAPL1Q9NZN1 696 aa10.29□□□□□ -0.76
SRP54-208ENST00000555557 PCDHB9Q9Y5E1 797 aa10.29□□□□□ -0.76
SRP54-208ENST00000555557 NFS1Q9Y697 457 aa10.29□□□□□ -0.76
SRP54-208ENST00000555557 PIAS3Q9Y6X2 628 aa10.29□□□□□ -0.76
SRP54-208ENST00000555557 MYO10Q9HD67 2058 aa10.29□□□□□ -0.76
SRP54-208ENST00000555557 F5P12259 2224 aa10.29□□□□□ -0.76
SRP54-208ENST00000555557 K7EQS6 105 aa10.29□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms