RNA–Protein interactions for RNA: ENST00000555416.5

SNX6-203, Transcript of sorting nexin 6, humanhuman

TSL 1 (best)

Gene SNX6, Length 1,215 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX6-203ENST00000555416 RHOT2Q8IXI1 618 aa13.83□□□□□ -0.2
SNX6-203ENST00000555416 OSBPL1AQ9BXW6 950 aa13.83□□□□□ -0.2
SNX6-203ENST00000555416 DKK3Q9UBP4 350 aa13.83□□□□□ -0.2
SNX6-203ENST00000555416 DMTF1Q9Y222 760 aa13.83□□□□□ -0.2
SNX6-203ENST00000555416 PCDHA13Q9Y5I0 950 aa13.83□□□□□ -0.2
SNX6-203ENST00000555416 SPEGQ15772 3267 aa13.83□□□□□ -0.2
SNX6-203ENST00000555416 SHROOM3Q8TF72 1996 aa13.82□□□□□ -0.2
SNX6-203ENST00000555416 TSPAN11A1L157 253 aa13.82□□□□□ -0.2
SNX6-203ENST00000555416 PRAMEF26H0Y7S4 382 aa13.82□□□□□ -0.2
SNX6-203ENST00000555416 CBFA2T3O75081 653 aa13.82□□□□□ -0.2
SNX6-203ENST00000555416 TOP3BO95985 862 aaKnown RBP13.82□□□□□ -0.2
SNX6-203ENST00000555416 PAK4O96013 591 aaPredicted RBP13.82□□□□□ -0.2
SNX6-203ENST00000555416 ADRB1P08588 477 aa13.82□□□□□ -0.2
SNX6-203ENST00000555416 KRT7P08729 469 aa13.82□□□□□ -0.2
SNX6-203ENST00000555416 COMTP21964 271 aa13.82□□□□□ -0.2
SNX6-203ENST00000555416 ARHGAP25P42331 645 aa13.82□□□□□ -0.2
SNX6-203ENST00000555416 CSNK1DP48730 415 aa13.82□□□□□ -0.2
SNX6-203ENST00000555416 CCDC15Q0P6D6 951 aa13.82□□□□□ -0.2
SNX6-203ENST00000555416 SLC14A1Q13336 389 aa13.82□□□□□ -0.2
SNX6-203ENST00000555416 IHHQ14623 411 aa13.82□□□□□ -0.2
SNX6-203ENST00000555416 PAFAH1B3Q15102 231 aaKnown RBP13.82□□□□□ -0.2
SNX6-203ENST00000555416 PDK2Q15119 407 aa13.82□□□□□ -0.2
SNX6-203ENST00000555416 IL27RAQ6UWB1 636 aa13.82□□□□□ -0.2
SNX6-203ENST00000555416 DBX2Q6ZNG2 339 aa13.82□□□□□ -0.2
SNX6-203ENST00000555416 GCNT7Q6ZNI0 430 aa13.82□□□□□ -0.2
SNX6-203ENST00000555416 TTC7BQ86TV6 843 aa13.82□□□□□ -0.2
SNX6-203ENST00000555416 TMEM139Q8IV31 216 aa13.82□□□□□ -0.2
SNX6-203ENST00000555416 NAXDQ8IW45 347 aa13.82□□□□□ -0.2
SNX6-203ENST00000555416 CCDC170Q8IYT3 715 aa13.82□□□□□ -0.2
SNX6-203ENST00000555416 MFSD2AQ8NA29 543 aa13.82□□□□□ -0.2
SNX6-203ENST00000555416 OR13H1Q8NG92 308 aa13.82□□□□□ -0.2
SNX6-203ENST00000555416 BMFQ96LC9 184 aa13.82□□□□□ -0.2
SNX6-203ENST00000555416 PSKH2Q96QS6 385 aa13.82□□□□□ -0.2
SNX6-203ENST00000555416 KLF6Q99612 283 aaPredicted RBP13.82□□□□□ -0.2
SNX6-203ENST00000555416 ZNF670Q9BS34 389 aa13.82□□□□□ -0.2
SNX6-203ENST00000555416 CINPQ9BW66 212 aaPredicted RBP13.82□□□□□ -0.2
SNX6-203ENST00000555416 C1QTNF2Q9BXJ5 285 aa13.82□□□□□ -0.2
SNX6-203ENST00000555416 SLC17A9Q9BYT1 436 aa13.82□□□□□ -0.2
SNX6-203ENST00000555416 SUV39H2Q9H5I1 410 aa13.82□□□□□ -0.2
SNX6-203ENST00000555416 TPX2Q9ULW0 747 aaKnown RBP13.82□□□□□ -0.2
SNX6-203ENST00000555416 A0A0U1RQJ8 604 aa13.81□□□□□ -0.2
SNX6-203ENST00000555416 A0A1B0GTQ1 180 aa13.81□□□□□ -0.2
SNX6-203ENST00000555416 LRRD1A4D1F6 860 aa13.81□□□□□ -0.2
SNX6-203ENST00000555416 POM121BA6NF01 834 aa13.81□□□□□ -0.2
SNX6-203ENST00000555416 TRAFD1O14545 582 aaPredicted RBP13.81□□□□□ -0.2
SNX6-203ENST00000555416 MMP20O60882 483 aa13.81□□□□□ -0.2
SNX6-203ENST00000555416 NDUFA10O95299 355 aa13.81□□□□□ -0.2
SNX6-203ENST00000555416 ZNF883P0CG24 379 aa13.81□□□□□ -0.2
SNX6-203ENST00000555416 CEACAM1P13688 526 aa13.81□□□□□ -0.2
SNX6-203ENST00000555416 TNNT1P13805 278 aa13.81□□□□□ -0.2
SNX6-203ENST00000555416 CR2P20023 1033 aa13.81□□□□□ -0.2
SNX6-203ENST00000555416 HNRNPA2B1P22626 353 aaKnown RBP13.81□□□□□ -0.2
SNX6-203ENST00000555416 SCNN1BP51168 640 aa13.81□□□□□ -0.2
SNX6-203ENST00000555416 MAXP61244 160 aa13.81□□□□□ -0.2
SNX6-203ENST00000555416 RPS21P63220 83 aaKnown RBP13.81□□□□□ -0.2
SNX6-203ENST00000555416 RAD51Q06609 339 aa13.81□□□□□ -0.2
SNX6-203ENST00000555416 GALNT2Q10471 571 aa13.81□□□□□ -0.2
SNX6-203ENST00000555416 RFTN1Q14699 578 aaPredicted RBP13.81□□□□□ -0.2
SNX6-203ENST00000555416 TPRG1LQ5T0D9 272 aa13.81□□□□□ -0.2
SNX6-203ENST00000555416 KIAA1161Q6NSJ0 714 aa13.81□□□□□ -0.2
SNX6-203ENST00000555416 GATAD2AQ86YP4 633 aa13.81□□□□□ -0.2
SNX6-203ENST00000555416 ATPAF2Q8N5M1 289 aa13.81□□□□□ -0.2
SNX6-203ENST00000555416 SPC24Q8NBT2 197 aa13.81□□□□□ -0.2
SNX6-203ENST00000555416 RAB7BQ96AH8 199 aa13.81□□□□□ -0.2
SNX6-203ENST00000555416 FEM1CQ96JP0 617 aa13.81□□□□□ -0.2
SNX6-203ENST00000555416 ZNF599Q96NL3 588 aa13.81□□□□□ -0.2
SNX6-203ENST00000555416 RNF157Q96PX1 679 aa13.81□□□□□ -0.2
SNX6-203ENST00000555416 ELF4Q99607 663 aaPredicted RBP13.81□□□□□ -0.2
SNX6-203ENST00000555416 WRAP53Q9BUR4 548 aaKnown RBP13.81□□□□□ -0.2
SNX6-203ENST00000555416 PCDH12Q9NPG4 1184 aa13.81□□□□□ -0.2
SNX6-203ENST00000555416 SEPT3Q9UH03 358 aa13.81□□□□□ -0.2
SNX6-203ENST00000555416 PCOLCE2Q9UKZ9 415 aa13.81□□□□□ -0.2
SNX6-203ENST00000555416 EPN1Q9Y6I3 576 aaPredicted RBP13.81□□□□□ -0.2
SNX6-203ENST00000555416 DUSP10Q9Y6W6 482 aa13.81□□□□□ -0.2
SNX6-203ENST00000555416 ANKRD36A6QL64 1941 aa13.81□□□□□ -0.2
SNX6-203ENST00000555416 NEMP1O14524 444 aa13.8□□□□□ -0.2
SNX6-203ENST00000555416 TSPAN6O43657 245 aa13.8□□□□□ -0.2
SNX6-203ENST00000555416 KRT1P04264 644 aa13.8□□□□□ -0.2
SNX6-203ENST00000555416 AKT2P31751 481 aa13.8□□□□□ -0.2
SNX6-203ENST00000555416 SERPINB6P35237 376 aa13.8□□□□□ -0.2
SNX6-203ENST00000555416 NUDT1P36639 197 aa13.8□□□□□ -0.2
SNX6-203ENST00000555416 GARSP41250 739 aaKnown RBP13.8□□□□□ -0.2
SNX6-203ENST00000555416 NOP2P46087 812 aaKnown RBP13.8□□□□□ -0.2
SNX6-203ENST00000555416 MARCKSL1P49006 195 aa13.8□□□□□ -0.2
SNX6-203ENST00000555416 HADHBP55084 474 aaKnown RBP13.8□□□□□ -0.2
SNX6-203ENST00000555416 FOXK2Q01167 660 aa13.8□□□□□ -0.2
SNX6-203ENST00000555416 NSUN2Q08J23 767 aaKnown RBP eCLIP13.8□□□□□ -0.2
SNX6-203ENST00000555416 BNIP3Q12983 259 aa13.8□□□□□ -0.2
SNX6-203ENST00000555416 STAT4Q14765 748 aa13.8□□□□□ -0.2
SNX6-203ENST00000555416 PTPRRQ15256 657 aa13.8□□□□□ -0.2
SNX6-203ENST00000555416 LLGL1Q15334 1064 aa13.8□□□□□ -0.2
SNX6-203ENST00000555416 UGP2Q16851 508 aa13.8□□□□□ -0.2
SNX6-203ENST00000555416 ZFYVE27Q5T4F4 411 aa13.8□□□□□ -0.2
SNX6-203ENST00000555416 NPNTQ6UXI9 565 aa13.8□□□□□ -0.2
SNX6-203ENST00000555416 ABI3BPQ7Z7G0 1075 aa13.8□□□□□ -0.2
SNX6-203ENST00000555416 IQCHQ86VS3 1027 aa13.8□□□□□ -0.2
SNX6-203ENST00000555416 SLC22A18ASQ8N1D0 253 aa13.8□□□□□ -0.2
SNX6-203ENST00000555416 PLD5Q8N7P1 536 aa13.8□□□□□ -0.2
SNX6-203ENST00000555416 ACRBPQ8NEB7 543 aa13.8□□□□□ -0.2
SNX6-203ENST00000555416 BAHD1Q8TBE0 780 aaPredicted RBP13.8□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 44.7 ms