RNA–Protein interactions for RNA: ENST00000554336.5

TUBB3-205, Transcript of tubulin beta 3 class III, humanhuman

TSL 3 BASIC

Gene TUBB3, Length 903 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBB3-205ENST00000554336 ARSIQ5FYB1 569 aa17.42■□□□□ 0.38
TUBB3-205ENST00000554336 SRLQ86TD4 932 aa17.42■□□□□ 0.38
TUBB3-205ENST00000554336 CAMKK1Q8N5S9 505 aa17.42■□□□□ 0.38
TUBB3-205ENST00000554336 AADATQ8N5Z0 425 aa17.42■□□□□ 0.38
TUBB3-205ENST00000554336 FAM71DQ8N9W8 422 aa17.42■□□□□ 0.38
TUBB3-205ENST00000554336 PIP4K2CQ8TBX8 421 aa17.42■□□□□ 0.38
TUBB3-205ENST00000554336 ZNF592Q92610 1267 aa17.42■□□□□ 0.38
TUBB3-205ENST00000554336 RTP4Q96DX8 246 aa17.42■□□□□ 0.38
TUBB3-205ENST00000554336 NUDCD1Q96RS6 583 aa17.42■□□□□ 0.38
TUBB3-205ENST00000554336 SEMA3CQ99985 751 aa17.42■□□□□ 0.38
TUBB3-205ENST00000554336 HEPHQ9BQS7 1158 aa17.42■□□□□ 0.38
TUBB3-205ENST00000554336 TPSD1Q9BZJ3 242 aa17.42■□□□□ 0.38
TUBB3-205ENST00000554336 POLR1EQ9GZS1 481 aaKnown RBP17.42■□□□□ 0.38
TUBB3-205ENST00000554336 FBRSQ9HAH7 460 aa17.42■□□□□ 0.38
TUBB3-205ENST00000554336 EBF1Q9UH73 591 aa17.42■□□□□ 0.38
TUBB3-205ENST00000554336 IL36AQ9UHA7 158 aa17.42■□□□□ 0.38
TUBB3-205ENST00000554336 AMACRQ9UHK6 382 aa17.42■□□□□ 0.38
TUBB3-205ENST00000554336 TTLL3Q9Y4R7 772 aa17.42■□□□□ 0.38
TUBB3-205ENST00000554336 F5H423 210 aaPredicted RBP17.41■□□□□ 0.38
TUBB3-205ENST00000554336 KIF2AO00139 706 aaPredicted RBP17.41■□□□□ 0.38
TUBB3-205ENST00000554336 PLK4O00444 970 aa17.41■□□□□ 0.38
TUBB3-205ENST00000554336 MID1O15344 667 aa17.41■□□□□ 0.38
TUBB3-205ENST00000554336 MTSS1O43312 755 aa17.41■□□□□ 0.38
TUBB3-205ENST00000554336 ITGAVP06756 1048 aa17.41■□□□□ 0.38
TUBB3-205ENST00000554336 NFKB1P19838 968 aa17.41■□□□□ 0.38
TUBB3-205ENST00000554336 KCNA4P22459 653 aa17.41■□□□□ 0.38
TUBB3-205ENST00000554336 DRD3P35462 400 aa17.41■□□□□ 0.38
TUBB3-205ENST00000554336 RECQLP46063 649 aaPredicted RBP17.41■□□□□ 0.38
TUBB3-205ENST00000554336 SCNN1BP51168 640 aa17.41■□□□□ 0.38
TUBB3-205ENST00000554336 ZNF776Q68DI1 518 aaPredicted RBP17.41■□□□□ 0.38
TUBB3-205ENST00000554336 NCEH1Q6PIU2 408 aa17.41■□□□□ 0.38
TUBB3-205ENST00000554336 PRPF39Q86UA1 669 aaKnown RBP17.41■□□□□ 0.38
TUBB3-205ENST00000554336 RYBPQ8N488 228 aaPredicted RBP17.41■□□□□ 0.38
TUBB3-205ENST00000554336 CCDC110Q8TBZ0 833 aa17.41■□□□□ 0.38
TUBB3-205ENST00000554336 ARRDC3Q96B67 414 aa17.41■□□□□ 0.38
TUBB3-205ENST00000554336 LOXL4Q96JB6 756 aa17.41■□□□□ 0.38
TUBB3-205ENST00000554336 CCDC114Q96M63 670 aa17.41■□□□□ 0.38
TUBB3-205ENST00000554336 NAP1L3Q99457 506 aaPredicted RBP17.41■□□□□ 0.38
TUBB3-205ENST00000554336 ESPNB1AK53 854 aa17.4■□□□□ 0.38
TUBB3-205ENST00000554336 ZNF500O60304 480 aaPredicted RBP17.4■□□□□ 0.38
TUBB3-205ENST00000554336 PHF2O75151 1096 aa17.4■□□□□ 0.38
TUBB3-205ENST00000554336 POP4O95707 220 aaKnown RBP17.4■□□□□ 0.38
TUBB3-205ENST00000554336 IL1BP01584 269 aa17.4■□□□□ 0.38
TUBB3-205ENST00000554336 UGT2B4P06133 528 aa17.4■□□□□ 0.38
TUBB3-205ENST00000554336 ZNF806P0C7X5 589 aa17.4■□□□□ 0.38
TUBB3-205ENST00000554336 ETS1P14921 441 aa17.4■□□□□ 0.38
TUBB3-205ENST00000554336 AP1S1P61966 158 aa17.4■□□□□ 0.38
TUBB3-205ENST00000554336 TRAF2Q12933 501 aa17.4■□□□□ 0.38
TUBB3-205ENST00000554336 PLK5Q496M5 336 aa17.4■□□□□ 0.38
TUBB3-205ENST00000554336 ANKRD20A2Q5SQ80 823 aa17.4■□□□□ 0.38
TUBB3-205ENST00000554336 ANKRD20A1Q5TYW2 823 aa17.4■□□□□ 0.38
TUBB3-205ENST00000554336 ANKRD20A3Q5VUR7 823 aa17.4■□□□□ 0.38
TUBB3-205ENST00000554336 KIAA1324Q6UXG2 1013 aaKnown RBP17.4■□□□□ 0.38
TUBB3-205ENST00000554336 ZSWIM9Q86XI8 627 aa17.4■□□□□ 0.38
TUBB3-205ENST00000554336 CAMK1DQ8IU85 385 aa17.4■□□□□ 0.38
TUBB3-205ENST00000554336 BBS5Q8N3I7 341 aa17.4■□□□□ 0.38
TUBB3-205ENST00000554336 TMIEQ8NEW7 156 aa17.4■□□□□ 0.38
TUBB3-205ENST00000554336 SPATA22Q8NHS9 363 aa17.4■□□□□ 0.38
TUBB3-205ENST00000554336 TADA1Q96BN2 335 aa17.4■□□□□ 0.38
TUBB3-205ENST00000554336 SIPA1Q96FS4 1042 aa17.4■□□□□ 0.38
TUBB3-205ENST00000554336 IMP4Q96G21 291 aaKnown RBP17.4■□□□□ 0.38
TUBB3-205ENST00000554336 ZC3H10Q96K80 434 aaKnown RBP17.4■□□□□ 0.38
TUBB3-205ENST00000554336 SPATA13Q96N96 652 aa17.4■□□□□ 0.38
TUBB3-205ENST00000554336 VAT1Q99536 393 aa17.4■□□□□ 0.38
TUBB3-205ENST00000554336 CPEB1Q9BZB8 566 aaKnown RBP17.4■□□□□ 0.38
TUBB3-205ENST00000554336 DDX47Q9H0S4 455 aaKnown RBP17.4■□□□□ 0.38
TUBB3-205ENST00000554336 DUSP15Q9H1R2 295 aaPredicted RBP17.4■□□□□ 0.38
TUBB3-205ENST00000554336 PABPC3Q9H361 631 aaKnown RBP17.4■□□□□ 0.38
TUBB3-205ENST00000554336 GLOD4Q9HC38 313 aa17.4■□□□□ 0.38
TUBB3-205ENST00000554336 USP36Q9P275 1121 aaKnown RBP17.4■□□□□ 0.38
TUBB3-205ENST00000554336 KLHL8Q9P2G9 620 aaPredicted RBP17.4■□□□□ 0.38
TUBB3-205ENST00000554336 ZNF148Q9UQR1 794 aa17.4■□□□□ 0.38
TUBB3-205ENST00000554336 LAMA1P25391 3075 aa17.4■□□□□ 0.38
TUBB3-205ENST00000554336 CFAP69A5D8W1 941 aa17.39■□□□□ 0.37
TUBB3-205ENST00000554336 C5orf60A6NFR6 353 aa17.39■□□□□ 0.37
TUBB3-205ENST00000554336 KPNA3O00505 521 aaPredicted RBP17.39■□□□□ 0.37
TUBB3-205ENST00000554336 TRAFD1O14545 582 aaPredicted RBP17.39■□□□□ 0.37
TUBB3-205ENST00000554336 URI1O94763 535 aaPredicted RBP17.39■□□□□ 0.37
TUBB3-205ENST00000554336 PRNPP04156 253 aa17.39■□□□□ 0.37
TUBB3-205ENST00000554336 SLC8A1P32418 973 aa17.39■□□□□ 0.37
TUBB3-205ENST00000554336 COILP38432 576 aaPredicted RBP17.39■□□□□ 0.37
TUBB3-205ENST00000554336 SKOR1P84550 965 aa17.39■□□□□ 0.37
TUBB3-205ENST00000554336 ITKQ08881 620 aa17.39■□□□□ 0.37
TUBB3-205ENST00000554336 PLA2G2CQ5R387 149 aa17.39■□□□□ 0.37
TUBB3-205ENST00000554336 TCEAL6Q6IPX3 200 aa17.39■□□□□ 0.37
TUBB3-205ENST00000554336 PARS2Q7L3T8 475 aaKnown RBP17.39■□□□□ 0.37
TUBB3-205ENST00000554336 FRMD1Q8N878 549 aa17.39■□□□□ 0.37
TUBB3-205ENST00000554336 PRCCQ92733 491 aaPredicted RBP17.39■□□□□ 0.37
TUBB3-205ENST00000554336 TCEAL3Q969E4 200 aa17.39■□□□□ 0.37
TUBB3-205ENST00000554336 MAGOHBQ96A72 148 aaKnown RBP17.39■□□□□ 0.37
TUBB3-205ENST00000554336 FAM131CQ96AQ9 280 aa17.39■□□□□ 0.37
TUBB3-205ENST00000554336 OXNAD1Q96HP4 312 aaPredicted RBP17.39■□□□□ 0.37
TUBB3-205ENST00000554336 GBA3Q9H227 469 aa17.39■□□□□ 0.37
TUBB3-205ENST00000554336 SCUBE2Q9NQ36 999 aa17.39■□□□□ 0.37
TUBB3-205ENST00000554336 BCCIPQ9P287 314 aaKnown RBP eCLIP17.39■□□□□ 0.37
TUBB3-205ENST00000554336 CDC23Q9UJX2 597 aa17.39■□□□□ 0.37
TUBB3-205ENST00000554336 INVSQ9Y283 1065 aa17.39■□□□□ 0.37
TUBB3-205ENST00000554336 PCDHGC4Q9Y5F7 938 aa17.39■□□□□ 0.37
TUBB3-205ENST00000554336 TPRP12270 2363 aaKnown RBP17.39■□□□□ 0.37
TUBB3-205ENST00000554336 MYLKQ15746 1914 aa17.39■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 42.9 ms