RNA–Protein interactions for RNA: ENST00000553989.1

TDP1-208, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

TSL 2

Gene TDP1, Length 728 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-208ENST00000553989 CCNHP51946 323 aaPredicted RBP8.99□□□□□ -0.97
TDP1-208ENST00000553989 CFHR1Q03591 330 aa8.99□□□□□ -0.97
TDP1-208ENST00000553989 UBXN1Q04323 297 aa8.99□□□□□ -0.97
TDP1-208ENST00000553989 PDE1CQ14123 709 aaPredicted RBP8.99□□□□□ -0.97
TDP1-208ENST00000553989 C5orf22Q49AR2 442 aa8.99□□□□□ -0.97
TDP1-208ENST00000553989 OTUD1Q5VV17 481 aaPredicted RBP8.99□□□□□ -0.97
TDP1-208ENST00000553989 ZCCHC8Q6NZY4 707 aaKnown RBP8.99□□□□□ -0.97
TDP1-208ENST00000553989 CRTC1Q6UUV9 634 aa8.99□□□□□ -0.97
TDP1-208ENST00000553989 KYAT3Q6YP21 454 aaKnown RBP8.99□□□□□ -0.97
TDP1-208ENST00000553989 ABI3BPQ7Z7G0 1075 aa8.99□□□□□ -0.97
TDP1-208ENST00000553989 ZNF354CQ86Y25 554 aa8.99□□□□□ -0.97
TDP1-208ENST00000553989 DCP2Q8IU60 420 aaKnown RBP8.99□□□□□ -0.97
TDP1-208ENST00000553989 PCDH20Q8N6Y1 951 aaKnown RBP8.99□□□□□ -0.97
TDP1-208ENST00000553989 MSANTD4Q8NCY6 345 aa8.99□□□□□ -0.97
TDP1-208ENST00000553989 LSM14AQ8ND56 463 aaKnown RBP8.99□□□□□ -0.97
TDP1-208ENST00000553989 ZNF548Q8NEK5 533 aaPredicted RBP8.99□□□□□ -0.97
TDP1-208ENST00000553989 LMX1AQ8TE12 382 aa8.99□□□□□ -0.97
TDP1-208ENST00000553989 C18orf8Q96DM3 657 aa8.99□□□□□ -0.97
TDP1-208ENST00000553989 IFT43Q96FT9 208 aa8.99□□□□□ -0.97
TDP1-208ENST00000553989 TBCBQ99426 244 aa8.99□□□□□ -0.97
TDP1-208ENST00000553989 NPY6RQ99463 290 aa8.99□□□□□ -0.97
TDP1-208ENST00000553989 IL12RB2Q99665 862 aa8.99□□□□□ -0.97
TDP1-208ENST00000553989 HEPHQ9BQS7 1158 aa8.99□□□□□ -0.97
TDP1-208ENST00000553989 EDEM3Q9BZQ6 932 aa8.99□□□□□ -0.97
TDP1-208ENST00000553989 TM6SF2Q9BZW4 377 aa8.99□□□□□ -0.97
TDP1-208ENST00000553989 ZYG11BQ9C0D3 744 aa8.99□□□□□ -0.97
TDP1-208ENST00000553989 HAUS4Q9H6D7 363 aa8.99□□□□□ -0.97
TDP1-208ENST00000553989 CAAP1Q9H8G2 361 aa8.99□□□□□ -0.97
TDP1-208ENST00000553989 POLR1BQ9H9Y6 1135 aa8.99□□□□□ -0.97
TDP1-208ENST00000553989 CPNE5Q9HCH3 593 aa8.99□□□□□ -0.97
TDP1-208ENST00000553989 ANLNQ9NQW6 1124 aa8.99□□□□□ -0.97
TDP1-208ENST00000553989 TMPRSS4Q9NRS4 437 aa8.99□□□□□ -0.97
TDP1-208ENST00000553989 NOL12Q9UGY1 213 aaKnown RBP eCLIP8.99□□□□□ -0.97
TDP1-208ENST00000553989 FCF1Q9Y324 198 aaKnown RBP8.99□□□□□ -0.97
TDP1-208ENST00000553989 FHOD1Q9Y613 1164 aa8.99□□□□□ -0.97
TDP1-208ENST00000553989 SMG1Q96Q15 3661 aaKnown RBP8.99□□□□□ -0.97
TDP1-208ENST00000553989 ILVBLA1L0T0 632 aa8.98□□□□□ -0.97
TDP1-208ENST00000553989 GTPBP10A4D1E9 387 aaKnown RBP8.98□□□□□ -0.97
TDP1-208ENST00000553989 POM121BA6NF01 834 aa8.98□□□□□ -0.97
TDP1-208ENST00000553989 CAPN8A6NHC0 703 aa8.98□□□□□ -0.97
TDP1-208ENST00000553989 SMAPO00193 183 aa8.98□□□□□ -0.97
TDP1-208ENST00000553989 RNF103O00237 685 aa8.98□□□□□ -0.97
TDP1-208ENST00000553989 FOXN3O00409 490 aaPredicted RBP8.98□□□□□ -0.97
TDP1-208ENST00000553989 AQP9O43315 295 aa8.98□□□□□ -0.97
TDP1-208ENST00000553989 IPO7O95373 1038 aaKnown RBP8.98□□□□□ -0.97
TDP1-208ENST00000553989 CSF2P04141 144 aa8.98□□□□□ -0.97
TDP1-208ENST00000553989 PLA2G2AP14555 144 aa8.98□□□□□ -0.97
TDP1-208ENST00000553989 NME1P15531 152 aaKnown RBP8.98□□□□□ -0.97
TDP1-208ENST00000553989 JUNDP17535 347 aa8.98□□□□□ -0.97
TDP1-208ENST00000553989 L1CAMP32004 1257 aa8.98□□□□□ -0.97
TDP1-208ENST00000553989 CYLC1P35663 651 aaPredicted RBP8.98□□□□□ -0.97
TDP1-208ENST00000553989 LSSP48449 732 aa8.98□□□□□ -0.97
TDP1-208ENST00000553989 THOP1P52888 689 aa8.98□□□□□ -0.97
TDP1-208ENST00000553989 BPIFB4P59827 614 aa8.98□□□□□ -0.97
TDP1-208ENST00000553989 RHDQ02161 417 aa8.98□□□□□ -0.97
TDP1-208ENST00000553989 GNA12Q03113 381 aa8.98□□□□□ -0.97
TDP1-208ENST00000553989 FZD2Q14332 565 aa8.98□□□□□ -0.97
TDP1-208ENST00000553989 POLD3Q15054 466 aaPredicted RBP8.98□□□□□ -0.97
TDP1-208ENST00000553989 DEFB133Q30KQ1 61 aa8.98□□□□□ -0.97
TDP1-208ENST00000553989 SLC25A52Q3SY17 297 aa8.98□□□□□ -0.97
TDP1-208ENST00000553989 CARD16Q5EG05 197 aa8.98□□□□□ -0.97
TDP1-208ENST00000553989 FIGNQ5HY92 759 aa8.98□□□□□ -0.97
TDP1-208ENST00000553989 ZNF569Q5MCW4 686 aa8.98□□□□□ -0.97
TDP1-208ENST00000553989 ACBD5Q5T8D3 534 aaPredicted RBP8.98□□□□□ -0.97
TDP1-208ENST00000553989 CDCP2Q5VXM1 449 aa8.98□□□□□ -0.97
TDP1-208ENST00000553989 RWDD4Q6NW29 188 aaKnown RBP8.98□□□□□ -0.97
TDP1-208ENST00000553989 RAD9BQ6WBX8 426 aa8.98□□□□□ -0.97
TDP1-208ENST00000553989 ZNF783Q6ZMS7 281 aa8.98□□□□□ -0.97
TDP1-208ENST00000553989 PARS2Q7L3T8 475 aaKnown RBP8.98□□□□□ -0.97
TDP1-208ENST00000553989 EFL1Q7Z2Z2 1120 aaKnown RBP8.98□□□□□ -0.97
TDP1-208ENST00000553989 HDXQ7Z353 690 aa8.98□□□□□ -0.97
TDP1-208ENST00000553989 FAM131BQ86XD5 332 aa8.98□□□□□ -0.97
TDP1-208ENST00000553989 ZNF843Q8N446 348 aa8.98□□□□□ -0.97
TDP1-208ENST00000553989 FAM181AQ8N9Y4 354 aa8.98□□□□□ -0.97
TDP1-208ENST00000553989 OR6K2Q8NGY2 324 aa8.98□□□□□ -0.97
TDP1-208ENST00000553989 VCPIP1Q96JH7 1222 aa8.98□□□□□ -0.97
TDP1-208ENST00000553989 CFAP57Q96MR6 1250 aa8.98□□□□□ -0.97
TDP1-208ENST00000553989 WDR24Q96S15 920 aa8.98□□□□□ -0.97
TDP1-208ENST00000553989 KCNK17Q96T54 332 aa8.98□□□□□ -0.97
TDP1-208ENST00000553989 NAPGQ99747 312 aaPredicted RBP8.98□□□□□ -0.97
TDP1-208ENST00000553989 PARD6BQ9BYG5 372 aa8.98□□□□□ -0.97
TDP1-208ENST00000553989 CEP44Q9C0F1 390 aa8.98□□□□□ -0.97
TDP1-208ENST00000553989 VPS16Q9H269 839 aa8.98□□□□□ -0.97
TDP1-208ENST00000553989 ACBD3Q9H3P7 528 aa8.98□□□□□ -0.97
TDP1-208ENST00000553989 ABHD10Q9NUJ1 306 aa8.98□□□□□ -0.97
TDP1-208ENST00000553989 ZNF446Q9NWS9 450 aa8.98□□□□□ -0.97
TDP1-208ENST00000553989 NCKIPSDQ9NZQ3 722 aa8.98□□□□□ -0.97
TDP1-208ENST00000553989 AJAP1Q9UKB5 411 aaPredicted RBP8.98□□□□□ -0.97
TDP1-208ENST00000553989 RAB21Q9UL25 225 aa8.98□□□□□ -0.97
TDP1-208ENST00000553989 SATB2Q9UPW6 733 aa8.98□□□□□ -0.97
TDP1-208ENST00000553989 FADS3Q9Y5Q0 445 aa8.98□□□□□ -0.97
TDP1-208ENST00000553989 HS3ST3A1Q9Y663 406 aa8.98□□□□□ -0.97
TDP1-208ENST00000553989 WASF2Q9Y6W5 498 aa8.98□□□□□ -0.97
TDP1-208ENST00000553989 ARID1BQ8NFD5 2236 aaPredicted RBP8.98□□□□□ -0.97
TDP1-208ENST00000553989 TDRD6O60522 2096 aaKnown RBP8.98□□□□□ -0.97
TDP1-208ENST00000553989 DOCK9Q9BZ29 2069 aa8.98□□□□□ -0.97
TDP1-208ENST00000553989 PTPRQQ9UMZ3 2332 aa8.97□□□□□ -0.97
TDP1-208ENST00000553989 SPTY2D1-AS1A0A0U1RR47 76 aa8.97□□□□□ -0.97
TDP1-208ENST00000553989 CTAGE15A4D2H0 777 aa8.97□□□□□ -0.97
TDP1-208ENST00000553989 IGLON5A6NGN9 336 aa8.97□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms