RNA–Protein interactions for RNA: ENST00000553704.2

LINC-ROR-201, Transcript of long intergenic non-protein coding RNA, regulator of reprogramming, humanhuman

TSL 1 (best) BASIC

Gene LINC-ROR, Length 2,603 nt, Biotype lincRNA, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC-ROR-201ENST00000553704 RTN3O95197 1032 aaPredicted RBP6.99□□□□□ -1.29
LINC-ROR-201ENST00000553704 IGLV3-25P01717 112 aa6.99□□□□□ -1.29
LINC-ROR-201ENST00000553704 CTSHP09668 335 aa6.99□□□□□ -1.29
LINC-ROR-201ENST00000553704 CPB1P15086 417 aa6.99□□□□□ -1.29
LINC-ROR-201ENST00000553704 ATP6V1B1P15313 513 aa6.99□□□□□ -1.29
LINC-ROR-201ENST00000553704 TSPAN8P19075 237 aa6.99□□□□□ -1.29
LINC-ROR-201ENST00000553704 ME2P23368 584 aa6.99□□□□□ -1.29
LINC-ROR-201ENST00000553704 EPHX2P34913 555 aa6.99□□□□□ -1.29
LINC-ROR-201ENST00000553704 HADHAP40939 763 aa6.99□□□□□ -1.29
LINC-ROR-201ENST00000553704 BRCC3P46736 316 aa6.99□□□□□ -1.29
LINC-ROR-201ENST00000553704 CDC42EP1Q00587 391 aa6.99□□□□□ -1.29
LINC-ROR-201ENST00000553704 BIRC2Q13490 618 aa6.99□□□□□ -1.29
LINC-ROR-201ENST00000553704 PTK2BQ14289 1009 aa6.99□□□□□ -1.29
LINC-ROR-201ENST00000553704 IHHQ14623 411 aa6.99□□□□□ -1.29
LINC-ROR-201ENST00000553704 CCL14Q16627 93 aa6.99□□□□□ -1.29
LINC-ROR-201ENST00000553704 NADK2Q4G0N4 442 aa6.99□□□□□ -1.29
LINC-ROR-201ENST00000553704 TECRLQ5HYJ1 363 aa6.99□□□□□ -1.29
LINC-ROR-201ENST00000553704 IL23RQ5VWK5 629 aa6.99□□□□□ -1.29
LINC-ROR-201ENST00000553704 BTBD8Q5XKL5 378 aa6.99□□□□□ -1.29
LINC-ROR-201ENST00000553704 DCLRE1AQ6PJP8 1040 aa6.99□□□□□ -1.29
LINC-ROR-201ENST00000553704 CYHR1Q6ZMK1 362 aa6.99□□□□□ -1.29
LINC-ROR-201ENST00000553704 LINC00523Q86TU6 105 aa6.99□□□□□ -1.29
LINC-ROR-201ENST00000553704 LDB1Q86U70 411 aaPredicted RBP6.99□□□□□ -1.29
LINC-ROR-201ENST00000553704 SPATA24Q86W54 205 aa6.99□□□□□ -1.29
LINC-ROR-201ENST00000553704 C2CD4AQ8NCU7 369 aaPredicted RBP6.99□□□□□ -1.29
LINC-ROR-201ENST00000553704 PPHLN1Q8NEY8 458 aaKnown RBP6.99□□□□□ -1.29
LINC-ROR-201ENST00000553704 OR9I1Q8NGQ6 314 aa6.99□□□□□ -1.29
LINC-ROR-201ENST00000553704 OR10T2Q8NGX3 314 aa6.99□□□□□ -1.29
LINC-ROR-201ENST00000553704 PDCD6IPQ8WUM4 868 aaKnown RBP6.99□□□□□ -1.29
LINC-ROR-201ENST00000553704 ANKRD49Q8WVL7 239 aa6.99□□□□□ -1.29
LINC-ROR-201ENST00000553704 GRIP2Q9C0E4 1043 aa6.99□□□□□ -1.29
LINC-ROR-201ENST00000553704 CSNK1G1Q9HCP0 422 aa6.99□□□□□ -1.29
LINC-ROR-201ENST00000553704 NSMCE4AQ9NXX6 385 aa6.99□□□□□ -1.29
LINC-ROR-201ENST00000553704 MPP6Q9NZW5 540 aa6.99□□□□□ -1.29
LINC-ROR-201ENST00000553704 VTI1BQ9UEU0 232 aa6.99□□□□□ -1.29
LINC-ROR-201ENST00000553704 PTCH2Q9Y6C5 1203 aa6.99□□□□□ -1.29
LINC-ROR-201ENST00000553704 TTC24A2A3L6 582 aaPredicted RBP6.99□□□□□ -1.29
LINC-ROR-201ENST00000553704 MYADML2A6NDP7 307 aa6.99□□□□□ -1.29
LINC-ROR-201ENST00000553704 SLC22A2O15244 555 aa6.99□□□□□ -1.29
LINC-ROR-201ENST00000553704 IRAK2O43187 625 aa6.99□□□□□ -1.29
LINC-ROR-201ENST00000553704 NPHS1O60500 1241 aa6.99□□□□□ -1.29
LINC-ROR-201ENST00000553704 PAGE1O75459 146 aa6.99□□□□□ -1.29
LINC-ROR-201ENST00000553704 CSPG5O95196 566 aa6.99□□□□□ -1.29
LINC-ROR-201ENST00000553704 NELFEP18615 380 aaKnown RBP6.99□□□□□ -1.29
LINC-ROR-201ENST00000553704 CD151P48509 253 aa6.99□□□□□ -1.29
LINC-ROR-201ENST00000553704 HK2P52789 917 aa6.99□□□□□ -1.29
LINC-ROR-201ENST00000553704 RPL26P61254 145 aaKnown RBP6.99□□□□□ -1.29
LINC-ROR-201ENST00000553704 LSAMPQ13449 338 aa6.99□□□□□ -1.29
LINC-ROR-201ENST00000553704 ART3Q13508 389 aa6.99□□□□□ -1.29
LINC-ROR-201ENST00000553704 EIF4EBP2Q13542 120 aaPredicted RBP6.99□□□□□ -1.29
LINC-ROR-201ENST00000553704 RFTN1Q14699 578 aaPredicted RBP6.99□□□□□ -1.29
LINC-ROR-201ENST00000553704 MANEALQ5VSG8 457 aa6.99□□□□□ -1.29
LINC-ROR-201ENST00000553704 ARMC3Q5W041 872 aa6.99□□□□□ -1.29
LINC-ROR-201ENST00000553704 REP15Q6BDI9 236 aa6.99□□□□□ -1.29
LINC-ROR-201ENST00000553704 IL31Q6EBC2 164 aa6.99□□□□□ -1.29
LINC-ROR-201ENST00000553704 RBM44Q6ZP01 1051 aaKnown RBP6.99□□□□□ -1.29
LINC-ROR-201ENST00000553704 PLEKHH3Q7Z736 793 aa6.99□□□□□ -1.29
LINC-ROR-201ENST00000553704 C14orf80Q86SX3 495 aa6.99□□□□□ -1.29
LINC-ROR-201ENST00000553704 SETD3Q86TU7 594 aaPredicted RBP6.99□□□□□ -1.29
LINC-ROR-201ENST00000553704 LRRTM3Q86VH5 581 aa6.99□□□□□ -1.29
LINC-ROR-201ENST00000553704 ARHGAP18Q8N392 663 aa6.99□□□□□ -1.29
LINC-ROR-201ENST00000553704 SPPL2BQ8TCT7 592 aa6.99□□□□□ -1.29
LINC-ROR-201ENST00000553704 GTF3C2Q8WUA4 911 aaPredicted RBP6.99□□□□□ -1.29
LINC-ROR-201ENST00000553704 CASP10Q92851 521 aa6.99□□□□□ -1.29
LINC-ROR-201ENST00000553704 SLC45A3Q96JT2 553 aa6.99□□□□□ -1.29
LINC-ROR-201ENST00000553704 DNAJC1Q96KC8 554 aaKnown RBP6.99□□□□□ -1.29
LINC-ROR-201ENST00000553704 PTPN18Q99952 460 aa6.99□□□□□ -1.29
LINC-ROR-201ENST00000553704 SLC39A3Q9BRY0 314 aa6.99□□□□□ -1.29
LINC-ROR-201ENST00000553704 UBE2OQ9C0C9 1292 aaKnown RBP6.99□□□□□ -1.29
LINC-ROR-201ENST00000553704 RBM38Q9H0Z9 239 aaKnown RBP6.99□□□□□ -1.29
LINC-ROR-201ENST00000553704 SEMA6AQ9H2E6 1030 aa6.99□□□□□ -1.29
LINC-ROR-201ENST00000553704 TRPC7Q9HCX4 862 aa6.99□□□□□ -1.29
LINC-ROR-201ENST00000553704 FAM105AQ9NUU6 356 aa6.99□□□□□ -1.29
LINC-ROR-201ENST00000553704 CACNA2D2Q9NY47 1150 aa6.99□□□□□ -1.29
LINC-ROR-201ENST00000553704 ADA2Q9NZK5 511 aa6.99□□□□□ -1.29
LINC-ROR-201ENST00000553704 FBXO5Q9UKT4 447 aa6.99□□□□□ -1.29
LINC-ROR-201ENST00000553704 CDH9Q9ULB4 789 aa6.99□□□□□ -1.29
LINC-ROR-201ENST00000553704 LZTS1Q9Y250 596 aa6.99□□□□□ -1.29
LINC-ROR-201ENST00000553704 DOCK4Q8N1I0 1966 aa6.99□□□□□ -1.29
LINC-ROR-201ENST00000553704 OR51F1A6NGY5 319 aa6.98□□□□□ -1.29
LINC-ROR-201ENST00000553704 ARL5CA6NH57 179 aa6.98□□□□□ -1.29
LINC-ROR-201ENST00000553704 TRIM38O00635 465 aa6.98□□□□□ -1.29
LINC-ROR-201ENST00000553704 UBFD1O14562 309 aaKnown RBP6.98□□□□□ -1.29
LINC-ROR-201ENST00000553704 MOCS2O96007 188 aaPredicted RBP6.98□□□□□ -1.29
LINC-ROR-201ENST00000553704 F9P00740 461 aa6.98□□□□□ -1.29
LINC-ROR-201ENST00000553704 ZNF865P0CJ78 1059 aaPredicted RBP6.98□□□□□ -1.29
LINC-ROR-201ENST00000553704 HSPA1AP0DMV8 641 aaKnown RBP6.98□□□□□ -1.29
LINC-ROR-201ENST00000553704 HSPA1BP0DMV9 641 aaKnown RBP6.98□□□□□ -1.29
LINC-ROR-201ENST00000553704 COL6A2P12110 1019 aa6.98□□□□□ -1.29
LINC-ROR-201ENST00000553704 CCNCP24863 283 aa6.98□□□□□ -1.29
LINC-ROR-201ENST00000553704 YWHAQP27348 245 aa6.98□□□□□ -1.29
LINC-ROR-201ENST00000553704 LHX1P48742 406 aa6.98□□□□□ -1.29
LINC-ROR-201ENST00000553704 PRKAA2P54646 552 aa6.98□□□□□ -1.29
LINC-ROR-201ENST00000553704 MAXP61244 160 aa6.98□□□□□ -1.29
LINC-ROR-201ENST00000553704 PSME3P61289 254 aa6.98□□□□□ -1.29
LINC-ROR-201ENST00000553704 PFKPQ01813 784 aa6.98□□□□□ -1.29
LINC-ROR-201ENST00000553704 PDAP1Q13442 181 aaKnown RBP6.98□□□□□ -1.29
LINC-ROR-201ENST00000553704 NRF1Q16656 503 aa6.98□□□□□ -1.29
LINC-ROR-201ENST00000553704 UGP2Q16851 508 aa6.98□□□□□ -1.29
LINC-ROR-201ENST00000553704 CLEC6AQ6EIG7 209 aa6.98□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms