RNA–Protein interactions for RNA: ENST00000553693.5

SCFD1-210, Transcript of sec1 family domain containing 1, humanhuman

TSL 3

Gene SCFD1, Length 490 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-210ENST00000553693 CCDC194A0A1B0GVG4 234 aa4.12□□□□□ -1.75
SCFD1-210ENST00000553693 hCG_1642624A0A1W2PR95 340 aa4.12□□□□□ -1.75
SCFD1-210ENST00000553693 MAGEA13PA6NCF6 341 aa4.12□□□□□ -1.75
SCFD1-210ENST00000553693 STX16-NPEPL1H3BU86 382 aa4.12□□□□□ -1.75
SCFD1-210ENST00000553693 EBAG9O00559 213 aa4.12□□□□□ -1.75
SCFD1-210ENST00000553693 STX16O14662 325 aa4.12□□□□□ -1.75
SCFD1-210ENST00000553693 GAGE7O76087 117 aa4.12□□□□□ -1.75
SCFD1-210ENST00000553693 GAGE12FP0CL80 117 aa4.12□□□□□ -1.75
SCFD1-210ENST00000553693 GAGE12GP0CL81 117 aa4.12□□□□□ -1.75
SCFD1-210ENST00000553693 GAGE12IP0CL82 117 aa4.12□□□□□ -1.75
SCFD1-210ENST00000553693 TFPIP10646 304 aa4.12□□□□□ -1.75
SCFD1-210ENST00000553693 HNF1BP35680 557 aa4.12□□□□□ -1.75
SCFD1-210ENST00000553693 KRTAP10-5P60370 271 aa4.12□□□□□ -1.75
SCFD1-210ENST00000553693 GAGE1Q13065 139 aa4.12□□□□□ -1.75
SCFD1-210ENST00000553693 GAGE4Q13068 117 aa4.12□□□□□ -1.75
SCFD1-210ENST00000553693 OTUD3Q5T2D3 398 aaPredicted RBP4.12□□□□□ -1.75
SCFD1-210ENST00000553693 CCDC174Q6PII3 467 aa4.12□□□□□ -1.75
SCFD1-210ENST00000553693 EXOC3L1Q86VI1 746 aa4.12□□□□□ -1.75
SCFD1-210ENST00000553693 MON1AQ86VX9 555 aa4.12□□□□□ -1.75
SCFD1-210ENST00000553693 ENAHQ8N8S7 591 aaPredicted RBP4.12□□□□□ -1.75
SCFD1-210ENST00000553693 AFG1LQ8WV93 481 aa4.12□□□□□ -1.75
SCFD1-210ENST00000553693 LRFN5Q96NI6 719 aa4.12□□□□□ -1.75
SCFD1-210ENST00000553693 ZNF385AQ96PM9 386 aaKnown RBP4.12□□□□□ -1.75
SCFD1-210ENST00000553693 TCF7L2Q9NQB0 619 aa4.12□□□□□ -1.75
SCFD1-210ENST00000553693 ANKRD10Q9NXR5 420 aa4.12□□□□□ -1.75
SCFD1-210ENST00000553693 OR6C3Q9NZP0 311 aa4.12□□□□□ -1.75
SCFD1-210ENST00000553693 MALT1Q9UDY8 824 aa4.12□□□□□ -1.75
SCFD1-210ENST00000553693 RRP7AQ9Y3A4 280 aaKnown RBP4.12□□□□□ -1.75
SCFD1-210ENST00000553693 ZCCHC6Q5VYS8 1495 aaKnown RBP4.11□□□□□ -1.75
SCFD1-210ENST00000553693 DCAF1Q9Y4B6 1507 aa4.11□□□□□ -1.75
SCFD1-210ENST00000553693 KRTAP9-6A8MVA2 160 aa4.11□□□□□ -1.75
SCFD1-210ENST00000553693 CLGNO14967 610 aa4.11□□□□□ -1.75
SCFD1-210ENST00000553693 ANP32CO43423 234 aa4.11□□□□□ -1.75
SCFD1-210ENST00000553693 SLC25A17O43808 307 aa4.11□□□□□ -1.75
SCFD1-210ENST00000553693 IGHV4-30-4P0DP06 118 aa4.11□□□□□ -1.75
SCFD1-210ENST00000553693 TTKP33981 857 aa4.11□□□□□ -1.75
SCFD1-210ENST00000553693 CHKAP35790 457 aa4.11□□□□□ -1.75
SCFD1-210ENST00000553693 LIFRP42702 1097 aa4.11□□□□□ -1.75
SCFD1-210ENST00000553693 DLG1Q12959 904 aa4.11□□□□□ -1.75
SCFD1-210ENST00000553693 DHX34Q14147 1143 aaKnown RBP4.11□□□□□ -1.75
SCFD1-210ENST00000553693 RHBDF2Q6PJF5 856 aa4.11□□□□□ -1.75
SCFD1-210ENST00000553693 IL20RBQ6UXL0 311 aa4.11□□□□□ -1.75
SCFD1-210ENST00000553693 DSTYKQ6XUX3 929 aa4.11□□□□□ -1.75
SCFD1-210ENST00000553693 CHD1LQ86WJ1 897 aa4.11□□□□□ -1.75
SCFD1-210ENST00000553693 NAGSQ8N159 534 aa4.11□□□□□ -1.75
SCFD1-210ENST00000553693 ZNF114Q8NC26 417 aa4.11□□□□□ -1.75
SCFD1-210ENST00000553693 YME1L1Q96TA2 773 aa4.11□□□□□ -1.75
SCFD1-210ENST00000553693 MPHOSPH6Q99547 160 aaKnown RBP4.11□□□□□ -1.75
SCFD1-210ENST00000553693 PKP4Q99569 1192 aa4.11□□□□□ -1.75
SCFD1-210ENST00000553693 TLR8Q9NR97 1041 aaKnown RBP4.11□□□□□ -1.75
SCFD1-210ENST00000553693 GDAQ9Y2T3 454 aa4.11□□□□□ -1.75
SCFD1-210ENST00000553693 DHX16O60231 1041 aaKnown RBP4.1□□□□□ -1.75
SCFD1-210ENST00000553693 PLGP00747 810 aaPredicted RBP4.1□□□□□ -1.75
SCFD1-210ENST00000553693 UMODP07911 640 aa4.1□□□□□ -1.75
SCFD1-210ENST00000553693 CHRM4P08173 479 aa4.1□□□□□ -1.75
SCFD1-210ENST00000553693 ACSM2AQ08AH3 577 aa4.1□□□□□ -1.75
SCFD1-210ENST00000553693 SLC18A3Q16572 532 aa4.1□□□□□ -1.75
SCFD1-210ENST00000553693 CCDC129Q6ZRS4 1044 aa4.1□□□□□ -1.75
SCFD1-210ENST00000553693 MUC20Q8N307 709 aaPredicted RBP4.1□□□□□ -1.75
SCFD1-210ENST00000553693 PGBD5Q8N414 524 aa4.1□□□□□ -1.75
SCFD1-210ENST00000553693 MYCT1Q8N699 235 aa4.1□□□□□ -1.75
SCFD1-210ENST00000553693 CEP70Q8NHQ1 597 aa4.1□□□□□ -1.75
SCFD1-210ENST00000553693 SPPL3Q8TCT6 385 aa4.1□□□□□ -1.75
SCFD1-210ENST00000553693 SECTM1Q8WVN6 248 aa4.1□□□□□ -1.75
SCFD1-210ENST00000553693 FAM167BQ9BTA0 163 aa4.1□□□□□ -1.75
SCFD1-210ENST00000553693 NOD2Q9HC29 1040 aa4.1□□□□□ -1.75
SCFD1-210ENST00000553693 TYW5A2RUC4 315 aaKnown RBP4.09□□□□□ -1.75
SCFD1-210ENST00000553693 BMPR1BO00238 502 aa4.09□□□□□ -1.75
SCFD1-210ENST00000553693 IRAK2O43187 625 aa4.09□□□□□ -1.75
SCFD1-210ENST00000553693 IGLV2-11P01706 119 aa4.09□□□□□ -1.75
SCFD1-210ENST00000553693 WEE2P0C1S8 567 aa4.09□□□□□ -1.75
SCFD1-210ENST00000553693 AMD1P17707 334 aa4.09□□□□□ -1.75
SCFD1-210ENST00000553693 CD72P21854 359 aa4.09□□□□□ -1.75
SCFD1-210ENST00000553693 BLKP51451 505 aa4.09□□□□□ -1.75
SCFD1-210ENST00000553693 HDAC4P56524 1084 aa4.09□□□□□ -1.75
SCFD1-210ENST00000553693 DDR1Q08345 913 aa4.09□□□□□ -1.75
SCFD1-210ENST00000553693 POSTNQ15063 836 aa4.09□□□□□ -1.75
SCFD1-210ENST00000553693 ANKRD1Q15327 319 aa4.09□□□□□ -1.75
SCFD1-210ENST00000553693 EDRF1Q3B7T1 1238 aa4.09□□□□□ -1.75
SCFD1-210ENST00000553693 ANKRD45Q5TZF3 282 aa4.09□□□□□ -1.75
SCFD1-210ENST00000553693 NAPEPLDQ6IQ20 393 aa4.09□□□□□ -1.75
SCFD1-210ENST00000553693 UNQ6126/PRO20091Q6UXV3 157 aa4.09□□□□□ -1.75
SCFD1-210ENST00000553693 PRSS45Q7RTY3 260 aa4.09□□□□□ -1.75
SCFD1-210ENST00000553693 LMNTD1Q8N9Z9 388 aa4.09□□□□□ -1.75
SCFD1-210ENST00000553693 POC1AQ8NBT0 407 aa4.09□□□□□ -1.75
SCFD1-210ENST00000553693 GDPD5Q8WTR4 605 aa4.09□□□□□ -1.75
SCFD1-210ENST00000553693 SLC39A13Q96H72 371 aa4.09□□□□□ -1.75
SCFD1-210ENST00000553693 EPYCQ99645 322 aa4.09□□□□□ -1.75
SCFD1-210ENST00000553693 DONSONQ9NYP3 566 aa4.09□□□□□ -1.75
SCFD1-210ENST00000553693 ERRFI1Q9UJM3 462 aaPredicted RBP4.09□□□□□ -1.75
SCFD1-210ENST00000553693 DNAJC16Q9Y2G8 782 aa4.09□□□□□ -1.75
SCFD1-210ENST00000553693 ARHGAP10A1A4S6 786 aa4.08□□□□□ -1.76
SCFD1-210ENST00000553693 WNT9BO14905 357 aa4.08□□□□□ -1.76
SCFD1-210ENST00000553693 ATP2C2O75185 946 aa4.08□□□□□ -1.76
SCFD1-210ENST00000553693 ZNF8P17098 575 aaPredicted RBP4.08□□□□□ -1.76
SCFD1-210ENST00000553693 RXRAP19793 462 aa4.08□□□□□ -1.76
SCFD1-210ENST00000553693 NESP48681 1621 aa4.08□□□□□ -1.76
SCFD1-210ENST00000553693 PAPOLAP51003 745 aaKnown RBP4.08□□□□□ -1.76
SCFD1-210ENST00000553693 YWHAZP63104 245 aaKnown RBP4.08□□□□□ -1.76
SCFD1-210ENST00000553693 ILF3Q12906 894 aaKnown RBP eCLIP4.08□□□□□ -1.76
Retrieved 100 of 20,778 RNA–protein pairs in 35.8 ms