RNA–Protein interactions for RNA: ENST00000553686.5

ATXN3-223, Transcript of ataxin 3, human

TSL 1 (best)

Gene ATXN3, Length 869 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
ATXN3-223	ENST00000553686	MRGPRG	Q86SM5	289 aa		6.29	□□□□□ -1.4
ATXN3-223	ENST00000553686	LDLRAD3	Q86YD5	345 aa		6.29	□□□□□ -1.4
ATXN3-223	ENST00000553686	PLXDC1	Q8IUK5	500 aa		6.29	□□□□□ -1.4
ATXN3-223	ENST00000553686	RHOT1	Q8IXI2	618 aa		6.29	□□□□□ -1.4
ATXN3-223	ENST00000553686	NCOA7	Q8NI08	942 aa		6.29	□□□□□ -1.4
ATXN3-223	ENST00000553686	SNRNP27	Q8WVK2	155 aa	Known RBP	6.29	□□□□□ -1.4
ATXN3-223	ENST00000553686	CASKIN2	Q8WXE0	1202 aa		6.29	□□□□□ -1.4
ATXN3-223	ENST00000553686	PSMG2	Q969U7	264 aa		6.29	□□□□□ -1.4
ATXN3-223	ENST00000553686	RILPL2	Q969X0	211 aa		6.29	□□□□□ -1.4
ATXN3-223	ENST00000553686	ZNF419	Q96HQ0	510 aa	Predicted RBP	6.29	□□□□□ -1.4
ATXN3-223	ENST00000553686	NEU1	Q99519	415 aa		6.29	□□□□□ -1.4
ATXN3-223	ENST00000553686	MYOC	Q99972	504 aa		6.29	□□□□□ -1.4
ATXN3-223	ENST00000553686	ADPGK	Q9BRR6	497 aa		6.29	□□□□□ -1.4
ATXN3-223	ENST00000553686	POLR3C	Q9BUI4	534 aa	Predicted RBP	6.29	□□□□□ -1.4
ATXN3-223	ENST00000553686	UNC45A	Q9H3U1	944 aa		6.29	□□□□□ -1.4
ATXN3-223	ENST00000553686	PCDHGA1	Q9Y5H4	931 aa		6.29	□□□□□ -1.4
ATXN3-223	ENST00000553686	MRFAP1	Q9Y605	127 aa		6.29	□□□□□ -1.4
ATXN3-223	ENST00000553686	HS3ST4	Q9Y661	456 aa		6.29	□□□□□ -1.4
ATXN3-223	ENST00000553686	C2CD3	Q4AC94	2353 aa		6.29	□□□□□ -1.4
ATXN3-223	ENST00000553686	SPAG17	Q6Q759	2223 aa		6.28	□□□□□ -1.4
ATXN3-223	ENST00000553686	CENPVL1	A0A0U1RR11	272 aa		6.28	□□□□□ -1.4
ATXN3-223	ENST00000553686	TCRBV21S2A2	A0A5A6	115 aa		6.28	□□□□□ -1.4
ATXN3-223	ENST00000553686	TMEM150B	A6NC51	233 aa		6.28	□□□□□ -1.4
ATXN3-223	ENST00000553686	MYMK	A6NI61	221 aa		6.28	□□□□□ -1.4
ATXN3-223	ENST00000553686	CCDC69	A6NI79	296 aa		6.28	□□□□□ -1.4
ATXN3-223	ENST00000553686	TMEM200C	A6NKL6	621 aa		6.28	□□□□□ -1.4
ATXN3-223	ENST00000553686		I3L4J1	428 aa		6.28	□□□□□ -1.4
ATXN3-223	ENST00000553686		K7EQS6	105 aa		6.28	□□□□□ -1.4
ATXN3-223	ENST00000553686	HIP1	O00291	1037 aa		6.28	□□□□□ -1.4
ATXN3-223	ENST00000553686	GABRD	O14764	452 aa		6.28	□□□□□ -1.4
ATXN3-223	ENST00000553686	TBX3	O15119	743 aa		6.28	□□□□□ -1.4
ATXN3-223	ENST00000553686	XPOT	O43592	962 aa	Known RBP	6.28	□□□□□ -1.4
ATXN3-223	ENST00000553686	KLF8	O95600	359 aa	Predicted RBP	6.28	□□□□□ -1.4
ATXN3-223	ENST00000553686	SFTPC	P11686	197 aa		6.28	□□□□□ -1.4
ATXN3-223	ENST00000553686	MYF5	P13349	255 aa		6.28	□□□□□ -1.4
ATXN3-223	ENST00000553686	C5AR1	P21730	350 aa		6.28	□□□□□ -1.4
ATXN3-223	ENST00000553686	DDX6	P26196	483 aa	Known RBP eCLIP	6.28	□□□□□ -1.4
ATXN3-223	ENST00000553686	IFNAR2	P48551	515 aa		6.28	□□□□□ -1.4
ATXN3-223	ENST00000553686	TARDBP	Q13148	414 aa	Known RBP eCLIP	6.28	□□□□□ -1.4
ATXN3-223	ENST00000553686	TBC1D25	Q3MII6	688 aa		6.28	□□□□□ -1.4
ATXN3-223	ENST00000553686	AGAP9	Q5VTM2	703 aa		6.28	□□□□□ -1.4
ATXN3-223	ENST00000553686	ZNF529	Q6P280	563 aa		6.28	□□□□□ -1.4
ATXN3-223	ENST00000553686	CWC27	Q6UX04	472 aa	Known RBP	6.28	□□□□□ -1.4
ATXN3-223	ENST00000553686	DRC7	Q8IY82	874 aa		6.28	□□□□□ -1.4
ATXN3-223	ENST00000553686	BEST2	Q8NFU1	509 aa		6.28	□□□□□ -1.4
ATXN3-223	ENST00000553686	CRYGN	Q8WXF5	182 aa		6.28	□□□□□ -1.4
ATXN3-223	ENST00000553686	NFKBIZ	Q9BYH8	718 aa		6.28	□□□□□ -1.4
ATXN3-223	ENST00000553686	CPNE5	Q9HCH3	593 aa		6.28	□□□□□ -1.4
ATXN3-223	ENST00000553686	C6orf50	Q9HD87	102 aa		6.28	□□□□□ -1.4
ATXN3-223	ENST00000553686	PCDH12	Q9NPG4	1184 aa		6.28	□□□□□ -1.4
ATXN3-223	ENST00000553686	DIAPH3	Q9NSV4	1193 aa		6.28	□□□□□ -1.4
ATXN3-223	ENST00000553686	SLC38A7	Q9NVC3	462 aa		6.28	□□□□□ -1.4
ATXN3-223	ENST00000553686	DUS2	Q9NX74	493 aa	Known RBP	6.28	□□□□□ -1.4
ATXN3-223	ENST00000553686	SLC23A1	Q9UHI7	598 aa		6.28	□□□□□ -1.4
ATXN3-223	ENST00000553686	TUBD1	Q9UJT1	453 aa		6.28	□□□□□ -1.4
ATXN3-223	ENST00000553686	RUVBL1	Q9Y265	456 aa	Known RBP	6.28	□□□□□ -1.4
ATXN3-223	ENST00000553686	NFE2L3	Q9Y4A8	694 aa		6.28	□□□□□ -1.4
ATXN3-223	ENST00000553686	PCDHA13	Q9Y5I0	950 aa		6.28	□□□□□ -1.4
ATXN3-223	ENST00000553686	ESYT2	A0FGR8	921 aa		6.27	□□□□□ -1.41
ATXN3-223	ENST00000553686	MSH4	O15457	936 aa		6.27	□□□□□ -1.41
ATXN3-223	ENST00000553686	TEX33	O43247	280 aa		6.27	□□□□□ -1.41
ATXN3-223	ENST00000553686	B4GALT5	O43286	388 aa		6.27	□□□□□ -1.41
ATXN3-223	ENST00000553686	SUV39H1	O43463	412 aa		6.27	□□□□□ -1.41
ATXN3-223	ENST00000553686	RAMP2	O60895	175 aa		6.27	□□□□□ -1.41
ATXN3-223	ENST00000553686	DDC	P20711	480 aa		6.27	□□□□□ -1.41
ATXN3-223	ENST00000553686	RPL9	P32969	192 aa	Known RBP	6.27	□□□□□ -1.41
ATXN3-223	ENST00000553686	QARS	P47897	775 aa	Known RBP	6.27	□□□□□ -1.41
ATXN3-223	ENST00000553686	TUFM	P49411	452 aa	Known RBP	6.27	□□□□□ -1.41
ATXN3-223	ENST00000553686	PDE1A	P54750	535 aa		6.27	□□□□□ -1.41
ATXN3-223	ENST00000553686	MBTD1	Q05BQ5	628 aa		6.27	□□□□□ -1.41
ATXN3-223	ENST00000553686	ZNF268	Q14587	947 aa	Predicted RBP	6.27	□□□□□ -1.41
ATXN3-223	ENST00000553686	HLA-B	Q31612	363 aa		6.27	□□□□□ -1.41
ATXN3-223	ENST00000553686	BEAN1	Q3B7T3	259 aa		6.27	□□□□□ -1.41
ATXN3-223	ENST00000553686	PLA2G4F	Q68DD2	849 aa		6.27	□□□□□ -1.41
ATXN3-223	ENST00000553686	CASC1	Q6TDU7	716 aa		6.27	□□□□□ -1.41
ATXN3-223	ENST00000553686	CD300LG	Q6UXG3	332 aa		6.27	□□□□□ -1.41
ATXN3-223	ENST00000553686	TRMT11	Q7Z4G4	463 aa	Known RBP	6.27	□□□□□ -1.41
ATXN3-223	ENST00000553686	CDR2L	Q86X02	465 aa	Predicted RBP	6.27	□□□□□ -1.41
ATXN3-223	ENST00000553686	ERICH1	Q86X53	443 aa		6.27	□□□□□ -1.41
ATXN3-223	ENST00000553686	RHOT2	Q8IXI1	618 aa		6.27	□□□□□ -1.41
ATXN3-223	ENST00000553686	LSMEM2	Q8N112	164 aa		6.27	□□□□□ -1.41
ATXN3-223	ENST00000553686	ALLC	Q8N6M5	410 aa		6.27	□□□□□ -1.41
ATXN3-223	ENST00000553686	IL17RC	Q8NAC3	791 aa		6.27	□□□□□ -1.41
ATXN3-223	ENST00000553686	FANCB	Q8NB91	859 aa		6.27	□□□□□ -1.41
ATXN3-223	ENST00000553686	OSCP1	Q8WVF1	389 aa		6.27	□□□□□ -1.41
ATXN3-223	ENST00000553686	USP13	Q92995	863 aa	Predicted RBP	6.27	□□□□□ -1.41
ATXN3-223	ENST00000553686	ZNF578	Q96N58	590 aa	Predicted RBP	6.27	□□□□□ -1.41
ATXN3-223	ENST00000553686	DPH1	Q9BZG8	443 aa		6.27	□□□□□ -1.41
ATXN3-223	ENST00000553686	REXO4	Q9GZR2	422 aa	Known RBP	6.27	□□□□□ -1.41
ATXN3-223	ENST00000553686	IL21R	Q9HBE5	538 aa		6.27	□□□□□ -1.41
ATXN3-223	ENST00000553686	PRMT7	Q9NVM4	692 aa	Predicted RBP	6.27	□□□□□ -1.41
ATXN3-223	ENST00000553686	BARHL2	Q9NY43	387 aa		6.27	□□□□□ -1.41
ATXN3-223	ENST00000553686	FAM30A	Q9NZY2	134 aa		6.27	□□□□□ -1.41
ATXN3-223	ENST00000553686	HSFX1	Q9UBD0	423 aa		6.27	□□□□□ -1.41
ATXN3-223	ENST00000553686	MAN2B2	Q9Y2E5	1009 aa		6.27	□□□□□ -1.41
ATXN3-223	ENST00000553686	AHCTF1	Q8WYP5	2266 aa		6.27	□□□□□ -1.41
ATXN3-223	ENST00000553686	ITPR3	Q14573	2671 aa		6.26	□□□□□ -1.41
ATXN3-223	ENST00000553686	IGHV1OR15-9	A0A0B4J2B8	117 aa		6.26	□□□□□ -1.41
ATXN3-223	ENST00000553686	OR6C75	A6NL08	312 aa		6.26	□□□□□ -1.41
ATXN3-223	ENST00000553686	SGK1	O00141	431 aa		6.26	□□□□□ -1.41

Retrieved 100 of 20,778 RNA–protein pairs in 55.8 ms